| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is xylX [H]
Identifier: 53722909
GI number: 53722909
Start: 2563271
End: 2564527
Strand: Reverse
Name: xylX [H]
Synonym: BPSS1888
Alternate gene names: 53722909
Gene position: 2564527-2563271 (Counterclockwise)
Preceding gene: 53722911
Following gene: 53722908
Centisome position: 80.82
GC content: 64.44
Gene sequence:
>1257_bases GTGGCGCTGATCGATCGCGCCGATTCGTCCGACGTGCGCTTTCCGCGCGACGACGGCTCGCGCGTGCCGTACAAGGTGTT CAGCTCGCAGGCGGTGTACGAGCGCGAGCAGGAGCGGATCTTCCGCGGGCCGACGTGGAATTTCGTCGCGCTCGAAGCGG AAATTCCGAAGCCGGGCGATTTCAAGAGCACGTTCGTCGGCGACACGCCCGTCGTCGTCACGCGCGGCGAGGACGGCGCG CTCGCCGCGTGGGTGAACCGCTGCGCGCATCGCGGCGCGCAGGTGTGCCGCAAGGCGCGCGGCAACGCGAGCTCGCACAC GTGCGTGTATCACCAGTGGAGCTTCGACAGCCGGGGCGACCTGCTCGGCGTGCCGTTCCGGCGCGGCCAGAAGGGCATGG CCGGGATGCCGGCCGATTTCGATCCGAAGAACCACGGGCTGCGCAAGCTGCGCGTCGACAGCTACAAGGGCCTCGTGTTC GCGACGTTCAGCGACGAGGTCGCGCCGCTGCCCGATTACCTCGGCGCGCAGATGCGGCCGTGGATCGACCGGATCTTCCA CAAGCCGATCGAGTATCTCGGCTGCACGCGGCAGTTCTCGAAATCGAACTGGAAGCTGTACTTCGAGAACGTGAAGGACC CGTATCACGCGAGCATGCTGCATCTGTTCCATACGACGTTCAATATTTTCCGCGTCGGCATGAAGGCGCGCTCGATTCCC GATGCGACGCACGGGCTGCACAGCATCATCACGATGACGAAGACGCAAGACGACGCGGACACCGCGAGCGCGTACAAGCA GCAGAACATCCGTTCGTTCGACGAAGGTTTCTCGCTCGAGGACGATTCGATCCTCGGCCTCGTGTCCGAGTACGACGAGG ACACGACGAACCACATCCAGCCGATCTTCCCGCAGCTCGTGATCCAGCAGATCCACAACACGCTCGTCGCACGCCAGTTG CTGCCGAAGGGGCCGAAGAACTTCGAATTGATCTTCCACTTCTTCGGCTATGCGGACGACACGCCCGAGCTGCGCGATTT GCGGATCAAGCAGGCGAACCTCGTCGGGCCCGCGGGCTACATCTCGATGGAGGACACCGAGGCGACCGAGCTCGTGCAGC GCGGCACCGTGCGCGACGCAAACGCGGCGTCGGTGATCGAGATGTCGCGCGGCAATCCGGACCAGCAGGACACGGCGATC ACCGAGAGCCTGATCCGCAGGTTCTGGGTCGGCTACCAGCAGTTGATGGGCTATTGA
Upstream 100 bases:
>100_bases GCGGATTGTCCAGCGCCTCAACCGCAGCAACTTGCATGGGATCGGAGCGGGCGCCCGCTCCGACCGACAGGAGACAATGA TGGAAATGACCGAATCGCCG
Downstream 100 bases:
>100_bases AGCGGGAGACGAACATGACCGACATCACCGACGGCCTCACCGGCGACATTCGCACGTGGTTCGAGCTGCACATGCTGCAG AACCGCTACATCGGGCATCT
Product: aromatic oxygenase
Products: NAD; cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol [C]
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 417
Protein sequence:
>418_residues MALIDRADSSDVRFPRDDGSRVPYKVFSSQAVYEREQERIFRGPTWNFVALEAEIPKPGDFKSTFVGDTPVVVTRGEDGA LAAWVNRCAHRGAQVCRKARGNASSHTCVYHQWSFDSRGDLLGVPFRRGQKGMAGMPADFDPKNHGLRKLRVDSYKGLVF ATFSDEVAPLPDYLGAQMRPWIDRIFHKPIEYLGCTRQFSKSNWKLYFENVKDPYHASMLHLFHTTFNIFRVGMKARSIP DATHGLHSIITMTKTQDDADTASAYKQQNIRSFDEGFSLEDDSILGLVSEYDEDTTNHIQPIFPQLVIQQIHNTLVARQL LPKGPKNFELIFHFFGYADDTPELRDLRIKQANLVGPAGYISMEDTEATELVQRGTVRDANAASVIEMSRGNPDQQDTAI TESLIRRFWVGYQQLMGY
Sequences:
>Translated_418_residues MALIDRADSSDVRFPRDDGSRVPYKVFSSQAVYEREQERIFRGPTWNFVALEAEIPKPGDFKSTFVGDTPVVVTRGEDGA LAAWVNRCAHRGAQVCRKARGNASSHTCVYHQWSFDSRGDLLGVPFRRGQKGMAGMPADFDPKNHGLRKLRVDSYKGLVF ATFSDEVAPLPDYLGAQMRPWIDRIFHKPIEYLGCTRQFSKSNWKLYFENVKDPYHASMLHLFHTTFNIFRVGMKARSIP DATHGLHSIITMTKTQDDADTASAYKQQNIRSFDEGFSLEDDSILGLVSEYDEDTTNHIQPIFPQLVIQQIHNTLVARQL LPKGPKNFELIFHFFGYADDTPELRDLRIKQANLVGPAGYISMEDTEATELVQRGTVRDANAASVIEMSRGNPDQQDTAI TESLIRRFWVGYQQLMGY >Mature_417_residues ALIDRADSSDVRFPRDDGSRVPYKVFSSQAVYEREQERIFRGPTWNFVALEAEIPKPGDFKSTFVGDTPVVVTRGEDGAL AAWVNRCAHRGAQVCRKARGNASSHTCVYHQWSFDSRGDLLGVPFRRGQKGMAGMPADFDPKNHGLRKLRVDSYKGLVFA TFSDEVAPLPDYLGAQMRPWIDRIFHKPIEYLGCTRQFSKSNWKLYFENVKDPYHASMLHLFHTTFNIFRVGMKARSIPD ATHGLHSIITMTKTQDDADTASAYKQQNIRSFDEGFSLEDDSILGLVSEYDEDTTNHIQPIFPQLVIQQIHNTLVARQLL PKGPKNFELIFHFFGYADDTPELRDLRIKQANLVGPAGYISMEDTEATELVQRGTVRDANAASVIEMSRGNPDQQDTAIT ESLIRRFWVGYQQLMGY
Specific function: Part Of The Multicomponent 3-Phenylpropionate Dioxygenase. Converts 3-Phenylpropionic Acid (Pp) Into Cis-3-(3- Carboxyethyl)-3,5-Cyclohexadiene-1,2-Diol (Pp-Dihydrodiol). [C]
COG id: COG4638
COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Rieske domain [H]
Homologues:
Organism=Escherichia coli, GI1788888, Length=408, Percent_Identity=27.2058823529412, Blast_Score=125, Evalue=5e-30, Organism=Escherichia coli, GI1788103, Length=203, Percent_Identity=26.6009852216749, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017639 - InterPro: IPR017941 - InterPro: IPR015881 - InterPro: IPR015879 - InterPro: IPR001663 [H]
Pfam domain/function: PF00355 Rieske; PF00848 Ring_hydroxyl_A [H]
EC number: 1.14.1.- [C]
Molecular weight: Translated: 47428; Mature: 47297
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00570 RING_HYDROXYL_ALPHA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIDRADSSDVRFPRDDGSRVPYKVFSSQAVYEREQERIFRGPTWNFVALEAEIPKPGD CCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC FKSTFVGDTPVVVTRGEDGALAAWVNRCAHRGAQVCRKARGNASSHTCVYHQWSFDSRGD CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC LLGVPFRRGQKGMAGMPADFDPKNHGLRKLRVDSYKGLVFATFSDEVAPLPDYLGAQMRP EECCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCH WIDRIFHKPIEYLGCTRQFSKSNWKLYFENVKDPYHASMLHLFHTTFNIFRVGMKARSIP HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DATHGLHSIITMTKTQDDADTASAYKQQNIRSFDEGFSLEDDSILGLVSEYDEDTTNHIQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHH PIFPQLVIQQIHNTLVARQLLPKGPKNFELIFHFFGYADDTPELRDLRIKQANLVGPAGY HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEECCCCCCCCHHHHHEEHHHCCCCCCCE ISMEDTEATELVQRGTVRDANAASVIEMSRGNPDQQDTAITESLIRRFWVGYQQLMGY EECCCCHHHHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALIDRADSSDVRFPRDDGSRVPYKVFSSQAVYEREQERIFRGPTWNFVALEAEIPKPGD CCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCCC FKSTFVGDTPVVVTRGEDGALAAWVNRCAHRGAQVCRKARGNASSHTCVYHQWSFDSRGD CCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCC LLGVPFRRGQKGMAGMPADFDPKNHGLRKLRVDSYKGLVFATFSDEVAPLPDYLGAQMRP EECCCHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCCCCCCHHHHCCCCCH WIDRIFHKPIEYLGCTRQFSKSNWKLYFENVKDPYHASMLHLFHTTFNIFRVGMKARSIP HHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCC DATHGLHSIITMTKTQDDADTASAYKQQNIRSFDEGFSLEDDSILGLVSEYDEDTTNHIQ CHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHH PIFPQLVIQQIHNTLVARQLLPKGPKNFELIFHFFGYADDTPELRDLRIKQANLVGPAGY HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEECCCCCCCCHHHHHEEHHHCCCCCCCE ISMEDTEATELVQRGTVRDANAASVIEMSRGNPDQQDTAITESLIRRFWVGYQQLMGY EECCCCHHHHHHHHCCCCCCCCHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: 2Fe-2S. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NADH; Proton; O2; 3-phenylpropionate [C]
Specific reaction: 3-phenylpropionate + NADH + Proton + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD 3-phenylpropionate + NADH + O2 = cis-3-(carboxyethyl)-3,5-cyclohexadiene-1,2-diol + NAD [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1740120; 1938949 [H]