| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722894
Identifier: 53722894
GI number: 53722894
Start: 2546671
End: 2547213
Strand: Reverse
Name: 53722894
Synonym: BPSS1874
Alternate gene names: NA
Gene position: 2547213-2546671 (Counterclockwise)
Preceding gene: 53722895
Following gene: 53722893
Centisome position: 80.28
GC content: 73.85
Gene sequence:
>543_bases GTGACGGGAAAGGCGGAGCCGATCATGCTGTTCCTGCTGTTTCACCTCGACGGCGAGCGTTACGCGCTCGATGCGGCGGA GATCGCCGAAGTGCTGCCGCTCGCCGCGACGAAGACGATCCCCGGCGCGCCCGCCTGGGCGGCCGGGATTCTGATGTACC GCGGCGAGCCGGTGCCGGTGATCGACGTGCCGCGGCTCGCGCTCGGCCGTCGAGCGCAGCCGCTGCGCTCGACGCGGCTC GTGCTCGTGCGCTACCGGTTGCCCGCGGCCGCCGAGCCGGCGTTCGTGCCGCCGCGCGTGCGCCTGCTCGGGCTCATCGT CGAGCGCGCGACGCAGACCGCGCGCATCGCGCGCGAGGCGTTTCGCGACAGCGGATTCGCGACGCCGCACGCGCGCTGGC TCGGACCGATCGCGAGCGATGCGGACGGCGTCGTGCAGTGGGTGGCGCTCAGGCACATCGTCGACGGCGAAGCGCGCGCG CTGCTGTTCGACTACGCGGCATCGCTCGATGCGCACGGCGCGCCGGCGGGAGGCGGGCGATGA
Upstream 100 bases:
>100_bases CTGCGGCAGTCGTCGCAGGCGATCGACGATCTGACGCTCGTCGCGAACCAGCTGCGCACCGGCGTGTCGCGCTTCAAGGT CGACGCGTGATGCGCGCCGC
Downstream 100 bases:
>100_bases ACGTGTTCGATCCGCGCTTTCATGCGTGGCTCTCGCGCGAGACCGGAATCGATCCGGCGTCGCTCGGCAACGATTTCGTC GCGCGCGCGCTCGCCGAGCG
Product: chemotaxis-related protein
Products: NA
Alternate protein names: Chemotaxis Signal Transduction Protein; Chemotaxis-Related Protein; CheW Domain-Containing Protein; CheW Domain Protein; CheW Domain-Containing Protein WspB; Chemotaxis Signal Transduction Protein CheW; CheW-Like Domain-Containing; Chemotaxis Signal Transducer CheW-Like Protein; Chemotaxis Signal Transducer Chew-Like Protein; Chemotaxis-Like Protein; Chemotaxis Protein
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MTGKAEPIMLFLLFHLDGERYALDAAEIAEVLPLAATKTIPGAPAWAAGILMYRGEPVPVIDVPRLALGRRAQPLRSTRL VLVRYRLPAAAEPAFVPPRVRLLGLIVERATQTARIAREAFRDSGFATPHARWLGPIASDADGVVQWVALRHIVDGEARA LLFDYAASLDAHGAPAGGGR
Sequences:
>Translated_180_residues MTGKAEPIMLFLLFHLDGERYALDAAEIAEVLPLAATKTIPGAPAWAAGILMYRGEPVPVIDVPRLALGRRAQPLRSTRL VLVRYRLPAAAEPAFVPPRVRLLGLIVERATQTARIAREAFRDSGFATPHARWLGPIASDADGVVQWVALRHIVDGEARA LLFDYAASLDAHGAPAGGGR >Mature_179_residues TGKAEPIMLFLLFHLDGERYALDAAEIAEVLPLAATKTIPGAPAWAAGILMYRGEPVPVIDVPRLALGRRAQPLRSTRLV LVRYRLPAAAEPAFVPPRVRLLGLIVERATQTARIAREAFRDSGFATPHARWLGPIASDADGVVQWVALRHIVDGEARAL LFDYAASLDAHGAPAGGGR
Specific function: Unknown
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19372; Mature: 19241
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKAEPIMLFLLFHLDGERYALDAAEIAEVLPLAATKTIPGAPAWAAGILMYRGEPVPV CCCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCE IDVPRLALGRRAQPLRSTRLVLVRYRLPAAAEPAFVPPRVRLLGLIVERATQTARIAREA ECCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRDSGFATPHARWLGPIASDADGVVQWVALRHIVDGEARALLFDYAASLDAHGAPAGGGR HHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure TGKAEPIMLFLLFHLDGERYALDAAEIAEVLPLAATKTIPGAPAWAAGILMYRGEPVPV CCCCCCEEEEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCHHHHHHHEECCCCCCE IDVPRLALGRRAQPLRSTRLVLVRYRLPAAAEPAFVPPRVRLLGLIVERATQTARIAREA ECCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH FRDSGFATPHARWLGPIASDADGVVQWVALRHIVDGEARALLFDYAASLDAHGAPAGGGR HHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA