| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is cheR2 [H]
Identifier: 53722893
GI number: 53722893
Start: 2544620
End: 2546674
Strand: Reverse
Name: cheR2 [H]
Synonym: BPSS1873
Alternate gene names: 53722893
Gene position: 2546674-2544620 (Counterclockwise)
Preceding gene: 53722894
Following gene: 53722892
Centisome position: 80.26
GC content: 74.6
Gene sequence:
>2055_bases ATGAACGTGTTCGATCCGCGCTTTCATGCGTGGCTCTCGCGCGAGACCGGAATCGATCCGGCGTCGCTCGGCAACGATTT CGTCGCGCGCGCGCTCGCCGAGCGGATCGCCGCGACGCAGCCGGGCGCGGGCGGCGAGGCCGCGCAGGCCGGCCGCCCGC AGCCGGCGATCACCGACGAGGCGGTCGACGCGTACTGGCAGTGCCTGAACGCATCGGCCGACGAGCGGCGCGCGCTGATC GAATTGTTCGTCGTGCCGGAGACCTGGTTCTTCCGCGAGCGCGAGGCGTTCGCCGCGCTCGCGCGACTCGGCGCGCAGCG CCTCTTCGCCGAGCCCGCGCGTGCGTTGCGGATCCTGAGCGCGCCGTGCTCGACGGGCGAGGAGCCGTATTCGGCGGCGA TGGCGCTGCTCGACGCGGGCATCGATCCGTCGCGCTTCGAGATCGACGCGCTCGACATCAGCGCGCGCGCGATCGCGCAT GCGCAGCGCGGGCGCTACGGACGCAATTCGTTTCGCGGCCACGTGCTCGGTTTTCGCGATCTGCATTTCAAGGCCGCGGC CGACGGCTGGGTGCTCGACGAGCGGGTGCGCGCGTGCGTGCGGTTCCGCCAGGCGAATCTGCTCGATCTGCTCGGCTGCG CGGGCGAACCGTACGATTTCGTGTTCTGCCGCAACGTGCTGATCTATTTCGACCGGGACGCGCAGGATCGCGTGGTGCGC ATCGTCGAGGAGCAGCTCGACGCGCGCGGCATCCTGTTCGTCGGGCCGGCCGAGACGGGCGTCGTGATGCGGCAGGGGCT CGCGTCCGCGCAGATTCCGCTCGCGTTCGCGTTTCGCAAGCCGGCTGTCGAGGCGGCGGCGCGGCCGGGCGCGGGCGGCG TCGGCGCGCGACGCGGCGGCGCGGCCCCGGGCGGCGCGGCGAACGTGGTAAACGCGGCGAACGCGGCAAATGCGGGCGCG GCGGCCGGCGATCGCGTGTCGACGTTCGGCGGCACGCTGCGCGCGATCGCGCACGAATGGTTCTTCGACGCCGGTTGGCC GACGCCCGAGCCGATCGTGCGCGCGATCGACGGCGCGCGGTCCGCGTTCGAATCGTTCGCCGCGTCGCCCGCGTCCGCGC AGGGCGCGACGCGTTTCGCGCCGTCCGAGCCGCGTGCGCAAGCGGGCGATGCCGGCGAACGCCCGGCCGGCATATTCGCG CGCGCGCCGGGCGCGGCGGAGCCCGGCGGCGAAGCGCTCGCGCGCACGGGCGACGCCGGGCGTTTTGCGACCGCGCCGCG TGCGAACGCATTCGAGACGGGCTGGACGGCGGCCGGCGCGTTCTCGCGCGCACCCGATGCCGGGCGTGCGCGGGCCGGCT TGTTCGCGCCGGCGCCCGACGCTGCGCGTGCGGCGCACGAGGAGCCGTTCGCGGATGCCGCGGGCGCCGCGCGCGCGGCG TTCGATGCGCCGCCCGGCGTGTCGGCCGACGCGGGCCGGCTCGCGGCGACGGCACGCGATGCCGGCGCGGCGCCCCGCGC GTCGGCGTCGCTCGATCACTCGTTCGACACCGCGCGGCCCGTGTTCGGCACGGCCGCCGTCGCCCCCGGCATCGCGGCGC CGGCGTTCGCGTCGCGCGCGTTGAGCGCCACCGCGCTCGCCGGCGCGTTCGAGGCCGACGGCACGTATGCCGCGGCCGTC GACGAAGCGCCGCTCGACGCCGCCCGCCGCCTCGCCGACGCCGGCGCGCTCGACGCCGCGCAGCAGGCGGTGCGTGCGTC GATCGAGCAATCCGGCCCGAGCGCCGAAGCGTTCTACCTGCTCGGCCTGATCGCCGATGCGCGGGGCCGCGGCGACGAAG CGACGGACTGCTATCGCAAGGCGCTGTACCTCGAGCCGACGCATTACGAAGCGCTGACCCATCTGGCGACGTTGCTCGAC ATCGCGGGCGATCGCGACGGCGCACAATGGCTGATGCAACGGGCCCGACGCGCGGCCCAGTACGAATCGGCCGCGTCCGT GACCGACACGGACGACGGCGAACCGAGAGGAACCCATGGAACGCGACGTCGTTGA
Upstream 100 bases:
>100_bases GGGTGGCGCTCAGGCACATCGTCGACGGCGAAGCGCGCGCGCTGCTGTTCGACTACGCGGCATCGCTCGATGCGCACGGC GCGCCGGCGGGAGGCGGGCG
Downstream 100 bases:
>100_bases GCGGCCGCGGATCGCATTCGACATCGACGCCTGCTGGAATCGCATCGGCACGCGCGGCGACCGCTCATGCGAGCGGCTCG ACACCTATCGACGCTGCCTG
Product: chemotaxis-related methyltranferase protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MNVFDPRFHAWLSRETGIDPASLGNDFVARALAERIAATQPGAGGEAAQAGRPQPAITDEAVDAYWQCLNASADERRALI ELFVVPETWFFREREAFAALARLGAQRLFAEPARALRILSAPCSTGEEPYSAAMALLDAGIDPSRFEIDALDISARAIAH AQRGRYGRNSFRGHVLGFRDLHFKAAADGWVLDERVRACVRFRQANLLDLLGCAGEPYDFVFCRNVLIYFDRDAQDRVVR IVEEQLDARGILFVGPAETGVVMRQGLASAQIPLAFAFRKPAVEAAARPGAGGVGARRGGAAPGGAANVVNAANAANAGA AAGDRVSTFGGTLRAIAHEWFFDAGWPTPEPIVRAIDGARSAFESFAASPASAQGATRFAPSEPRAQAGDAGERPAGIFA RAPGAAEPGGEALARTGDAGRFATAPRANAFETGWTAAGAFSRAPDAGRARAGLFAPAPDAARAAHEEPFADAAGAARAA FDAPPGVSADAGRLAATARDAGAAPRASASLDHSFDTARPVFGTAAVAPGIAAPAFASRALSATALAGAFEADGTYAAAV DEAPLDAARRLADAGALDAAQQAVRASIEQSGPSAEAFYLLGLIADARGRGDEATDCYRKALYLEPTHYEALTHLATLLD IAGDRDGAQWLMQRARRAAQYESAASVTDTDDGEPRGTHGTRRR
Sequences:
>Translated_684_residues MNVFDPRFHAWLSRETGIDPASLGNDFVARALAERIAATQPGAGGEAAQAGRPQPAITDEAVDAYWQCLNASADERRALI ELFVVPETWFFREREAFAALARLGAQRLFAEPARALRILSAPCSTGEEPYSAAMALLDAGIDPSRFEIDALDISARAIAH AQRGRYGRNSFRGHVLGFRDLHFKAAADGWVLDERVRACVRFRQANLLDLLGCAGEPYDFVFCRNVLIYFDRDAQDRVVR IVEEQLDARGILFVGPAETGVVMRQGLASAQIPLAFAFRKPAVEAAARPGAGGVGARRGGAAPGGAANVVNAANAANAGA AAGDRVSTFGGTLRAIAHEWFFDAGWPTPEPIVRAIDGARSAFESFAASPASAQGATRFAPSEPRAQAGDAGERPAGIFA RAPGAAEPGGEALARTGDAGRFATAPRANAFETGWTAAGAFSRAPDAGRARAGLFAPAPDAARAAHEEPFADAAGAARAA FDAPPGVSADAGRLAATARDAGAAPRASASLDHSFDTARPVFGTAAVAPGIAAPAFASRALSATALAGAFEADGTYAAAV DEAPLDAARRLADAGALDAAQQAVRASIEQSGPSAEAFYLLGLIADARGRGDEATDCYRKALYLEPTHYEALTHLATLLD IAGDRDGAQWLMQRARRAAQYESAASVTDTDDGEPRGTHGTRRR >Mature_684_residues MNVFDPRFHAWLSRETGIDPASLGNDFVARALAERIAATQPGAGGEAAQAGRPQPAITDEAVDAYWQCLNASADERRALI ELFVVPETWFFREREAFAALARLGAQRLFAEPARALRILSAPCSTGEEPYSAAMALLDAGIDPSRFEIDALDISARAIAH AQRGRYGRNSFRGHVLGFRDLHFKAAADGWVLDERVRACVRFRQANLLDLLGCAGEPYDFVFCRNVLIYFDRDAQDRVVR IVEEQLDARGILFVGPAETGVVMRQGLASAQIPLAFAFRKPAVEAAARPGAGGVGARRGGAAPGGAANVVNAANAANAGA AAGDRVSTFGGTLRAIAHEWFFDAGWPTPEPIVRAIDGARSAFESFAASPASAQGATRFAPSEPRAQAGDAGERPAGIFA RAPGAAEPGGEALARTGDAGRFATAPRANAFETGWTAAGAFSRAPDAGRARAGLFAPAPDAARAAHEEPFADAAGAARAA FDAPPGVSADAGRLAATARDAGAAPRASASLDHSFDTARPVFGTAAVAPGIAAPAFASRALSATALAGAFEADGTYAAAV DEAPLDAARRLADAGALDAAQQAVRASIEQSGPSAEAFYLLGLIADARGRGDEATDCYRKALYLEPTHYEALTHLATLLD IAGDRDGAQWLMQRARRAAQYESAASVTDTDDGEPRGTHGTRRR
Specific function: Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP [H]
COG id: COG1352
COG function: function code NT; Methylase of chemotaxis methyl-accepting proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheR-type methyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1788193, Length=198, Percent_Identity=33.8383838383838, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022642 - InterPro: IPR000780 - InterPro: IPR022641 [H]
Pfam domain/function: PF01739 CheR; PF03705 CheR_N [H]
EC number: =2.1.1.80 [H]
Molecular weight: Translated: 71332; Mature: 71332
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS50123 CHER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVFDPRFHAWLSRETGIDPASLGNDFVARALAERIAATQPGAGGEAAQAGRPQPAITDE CCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHH AVDAYWQCLNASADERRALIELFVVPETWFFREREAFAALARLGAQRLFAEPARALRILS HHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APCSTGEEPYSAAMALLDAGIDPSRFEIDALDISARAIAHAQRGRYGRNSFRGHVLGFRD CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEC LHFKAAADGWVLDERVRACVRFRQANLLDLLGCAGEPYDFVFCRNVLIYFDRDAQDRVVR CEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHH IVEEQLDARGILFVGPAETGVVMRQGLASAQIPLAFAFRKPAVEAAARPGAGGVGARRGG HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHCHHHHHHCCCCCCCCCCCCCC AAPGGAANVVNAANAANAGAAAGDRVSTFGGTLRAIAHEWFFDAGWPTPEPIVRAIDGAR CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SAFESFAASPASAQGATRFAPSEPRAQAGDAGERPAGIFARAPGAAEPGGEALARTGDAG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCC RFATAPRANAFETGWTAAGAFSRAPDAGRARAGLFAPAPDAARAAHEEPFADAAGAARAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH FDAPPGVSADAGRLAATARDAGAAPRASASLDHSFDTARPVFGTAAVAPGIAAPAFASRA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHH LSATALAGAFEADGTYAAAVDEAPLDAARRLADAGALDAAQQAVRASIEQSGPSAEAFYL HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH LGLIADARGRGDEATDCYRKALYLEPTHYEALTHLATLLDIAGDRDGAQWLMQRARRAAQ HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YESAASVTDTDDGEPRGTHGTRRR HHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNVFDPRFHAWLSRETGIDPASLGNDFVARALAERIAATQPGAGGEAAQAGRPQPAITDE CCCCCCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCHH AVDAYWQCLNASADERRALIELFVVPETWFFREREAFAALARLGAQRLFAEPARALRILS HHHHHHHHHCCCHHHHHEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH APCSTGEEPYSAAMALLDAGIDPSRFEIDALDISARAIAHAQRGRYGRNSFRGHVLGFRD CCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHHHHCCCCCCCCCCCEEEEEC LHFKAAADGWVLDERVRACVRFRQANLLDLLGCAGEPYDFVFCRNVLIYFDRDAQDRVVR CEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCHHHHCCCEEEEECCCHHHHHHH IVEEQLDARGILFVGPAETGVVMRQGLASAQIPLAFAFRKPAVEAAARPGAGGVGARRGG HHHHHHCCCCEEEECCCCHHHHHHHCCCCCCCCCHHHHHCHHHHHHCCCCCCCCCCCCCC AAPGGAANVVNAANAANAGAAAGDRVSTFGGTLRAIAHEWFFDAGWPTPEPIVRAIDGAR CCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH SAFESFAASPASAQGATRFAPSEPRAQAGDAGERPAGIFARAPGAAEPGGEALARTGDAG HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHCCCCCC RFATAPRANAFETGWTAAGAFSRAPDAGRARAGLFAPAPDAARAAHEEPFADAAGAARAA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHH FDAPPGVSADAGRLAATARDAGAAPRASASLDHSFDTARPVFGTAAVAPGIAAPAFASRA CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHH LSATALAGAFEADGTYAAAVDEAPLDAARRLADAGALDAAQQAVRASIEQSGPSAEAFYL HHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHH LGLIADARGRGDEATDCYRKALYLEPTHYEALTHLATLLDIAGDRDGAQWLMQRARRAAQ HHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YESAASVTDTDDGEPRGTHGTRRR HHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]