Click here to switch to the map view.

The map label for this gene is 53722892

Identifier: 53722892

GI number: 53722892

Start: 2543905

End: 2544639

Strand: Reverse

Name: 53722892

Synonym: BPSS1872

Alternate gene names: NA

Gene position: 2544639-2543905 (Counterclockwise)

Preceding gene: 53722893

Following gene: 53722891

Centisome position: 80.2

GC content: 71.7

Gene sequence:

>735_bases
ATGGAACGCGACGTCGTTGAGCGGCCGCGGATCGCATTCGACATCGACGCCTGCTGGAATCGCATCGGCACGCGCGGCGA
CCGCTCATGCGAGCGGCTCGACACCTATCGACGCTGCCTGAACTGCCCGGTGTTCGAGCGGCACGCGGCGCTGCTGCTCG
ATCGCCCGCTGACCGACGCGGATCTCGCCGACGCGGCGCGCGTTGCCGCCGAGCGCGCGCCGGGCGCGAACGCGCCGGCA
TCGAAGGCGTCGGCAGCGGCGCGCGACGGCGATGCCGACGCCGTGCATTCGGCGCTCGCGTTTCGCGTCGCCGACGAGTG
GCTCGCGCTGCCGATTCGCGTGCTGCGCGAGATCACCGATACGCGCGCGATTCATCCGCTGCCGCACCGGCGCAACCGCG
CGGTGCTCGGCATCGTCAACGTGCGCGGGATGCTGCGCGTCGCGGTATCGCTCGCCGAGCTGCTGAGCCTCGATGCGCGC
GCGGATCGCGCCGCGCCGCGCATGAGCTTCACGCGGATGCTCGTCGTCGCGCATCGCGGCGATCCGGTCGTGTTTCCGGT
CGACGAAGTCGAAGGCGTGCTGCGCTTCGCGTCCGCCGACTGGATGCCGGTGCCGGCCACCGTCGCGCGCACGGGCGCCG
TGCATTCGCGCGGCGTGTTCGCGTGGCGCGGCAAGTCGATCGGCCTGCTCGACGAAGATCGCCTGTTCGATTCGCTGACG
CGGAGCCTGCGATGA

Upstream 100 bases:

>100_bases
GACGGCGCACAATGGCTGATGCAACGGGCCCGACGCGCGGCCCAGTACGAATCGGCCGCGTCCGTGACCGACACGGACGA
CGGCGAACCGAGAGGAACCC

Downstream 100 bases:

>100_bases
GCACCGACGACGATTTCGGCCGCGCGTCGCTGCTCGAGCTGTTTCGCGAGGAGACGCACACGCAGACGCAGGCGCTGTCC
GAGCGGCTGCTCGCGCTCGA

Product: chemotaxis-related protein

Products: NA

Alternate protein names: Chemotaxis Signal Transduction Protein; CheW Domain-Containing Protein; Chemotaxis Protein; Signal Transducer CheW-Like Protein; CheW-Like Domain-Containing; Chemotaxis-Related Protein; Chemotaxis Protein CheW; Chemotaxis-Like Protein; CheW Domain-Containing Protein WspD

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA
SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR
ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT
RSLR

Sequences:

>Translated_244_residues
MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA
SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR
ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT
RSLR
>Mature_244_residues
MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDADLADAARVAAERAPGANAPA
SKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITDTRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDAR
ADRAAPRMSFTRMLVVAHRGDPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT
RSLR

Specific function: Unknown

COG id: COG0835

COG function: function code NT; Chemotaxis signal transduction protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26929; Mature: 26929

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS50851 CHEW

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDA
CCCCCHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
DLADAARVAAERAPGANAPASKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITD
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDARADRAAPRMSFTRMLVVAHRG
HCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECC
DPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT
CCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH
RSLR
HHCC
>Mature Secondary Structure
MERDVVERPRIAFDIDACWNRIGTRGDRSCERLDTYRRCLNCPVFERHAALLLDRPLTDA
CCCCCHHCCCEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCC
DLADAARVAAERAPGANAPASKASAAARDGDADAVHSALAFRVADEWLALPIRVLREITD
HHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TRAIHPLPHRRNRAVLGIVNVRGMLRVAVSLAELLSLDARADRAAPRMSFTRMLVVAHRG
HCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEEEEEECC
DPVVFPVDEVEGVLRFASADWMPVPATVARTGAVHSRGVFAWRGKSIGLLDEDRLFDSLT
CCEEEEHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH
RSLR
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA