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The map label for this gene is 53722825

Identifier: 53722825

GI number: 53722825

Start: 2465765

End: 2466187

Strand: Reverse

Name: 53722825

Synonym: BPSS1806

Alternate gene names: NA

Gene position: 2466187-2465765 (Counterclockwise)

Preceding gene: 53722826

Following gene: 53722824

Centisome position: 77.72

GC content: 66.67

Gene sequence:

>423_bases
GTGACAGGTTTGAATGAACGAGGCTTCGGCGCATGGAATCGGATCGAGCGCGAAACGCTGACCGAGCGGATCGAGCGGCA
GGTCGTCTCGGGCGACGCGCTGACGATGGCGAGGTTGTATCTGAAGAAAGGCGCGTTCGTCGGGACGCACTCGCATCCGA
ACGAGCAGCTCACCTACATCCTCGAGGGGCGCCTGCTGTTTCGTTACGGCGAGCATCTCGAGCACGAGGTCGAGGTCGGG
CCGGGGGAGATCCTGCATCTCCCGGCGAACGTGCCGCACAACGCGCTGTGCCTCGAAGACGCGGTCGATCTCGACGTGTT
CACGCCGGTGCGGACGGACTGGCTCGCGCCCGGCGGCAACCGCTATTTCGCCGGCGCGTCGGCCGCGACGTCGCCCACGC
CGGTTCCGTCGGCGAGCCGATGA

Upstream 100 bases:

>100_bases
GCGCGCGAACGGGATGTGCAGCGCGCAACGGGCGGCGTGCGCGTTCGCGAGCTGTCCGCGTGAGCGCGCGCCTTTCACAC
GATCGAGCGAGGAGGAAATC

Downstream 100 bases:

>100_bases
CTACCGTTTACCGAAGCCGACGAACCGAGGAGGCGCCGTGCTCATTCAGGATGCGTTGCTCAAGATGTCGTTTTACGTGT
CGCTCGTGCTGATCGTACCT

Product: hypothetical protein

Products: NA

Alternate protein names: Cupin 2 Conserved Barrel Domain-Containing Protein; Pectin Degradation Protein KdgF; Cupin Domain Protein; Cupin 2 Conserved Barrel Domain Protein; Degradation Protein

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MTGLNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEVEVG
PGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR

Sequences:

>Translated_140_residues
MTGLNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEVEVG
PGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR
>Mature_139_residues
TGLNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYILEGRLLFRYGEHLEHEVEVGP
GEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGNRYFAGASAATSPTPVPSASR

Specific function: Unknown

COG id: COG1917

COG function: function code S; Uncharacterized conserved protein, contains double-stranded beta-helix domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15465; Mature: 15333

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGLNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCEEEEE
LEGRLLFRYGEHLEHEVEVGPGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGN
ECCEEEEECCCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCC
RYFAGASAATSPTPVPSASR
EEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGLNERGFGAWNRIERETLTERIERQVVSGDALTMARLYLKKGAFVGTHSHPNEQLTYI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCCEEEEE
LEGRLLFRYGEHLEHEVEVGPGEILHLPANVPHNALCLEDAVDLDVFTPVRTDWLAPGGN
ECCEEEEECCCCCCEEEECCCCEEEEECCCCCCCEEEECCCCCCEEECCCCCCCCCCCCC
RYFAGASAATSPTPVPSASR
EEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA