| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722795
Identifier: 53722795
GI number: 53722795
Start: 2433214
End: 2434440
Strand: Reverse
Name: 53722795
Synonym: BPSS1774
Alternate gene names: NA
Gene position: 2434440-2433214 (Counterclockwise)
Preceding gene: 53722796
Following gene: 53722791
Centisome position: 76.72
GC content: 54.52
Gene sequence:
>1227_bases ATGATTTCATGCAAGCTGAAGGCGCTTGAAAGTTCGAAAATTCGAATCTCAGAAAAATCATCCAGAACTTACCAGGGGAT TCAAATGAAAAATTTTGTCGCAAAAATCTATATCGTTGCGCTTGGCTCTCTGATCGTGACGAGCAGCCATTCCCAGCAGA TTAGAACCCACGGTGCAGTGACGCAAATCACGTTACCGGAACACGGATCGCAGGCTTCTTCGATCGATTTCAAGAACGCG ATACCGATTCCATTGCCGAAGCCGATCGTGGCGCCGCCCACCATGCTAGATTCACTGATGTACAACGCTAAGCCGTCCCT GGGTGTTCCTGGCTACTCGCCTGGTGGCGCTGGAGACGGCAAGCAAAGGCCAATGCGACTGGTGGCGCCTATGGACCTGA ATCAAATCGGTATCGAACCACAGGAATTCGGCTCATCGAATCAACCGTACACCACCAGTCAAGTAAACGCATACGGCGAC AATACACAGTACTATTATCCATTTCGTCCGGCCGGCAAGCTGTTTTTCAACATCGGCTCGGCGTCTTATTTATGTTCCGC ATCCCTCATTAAGCGAGGGGTGGTCGTCACGGCGGCGCATTGTGTCGCGAATTTCGGCCAGCGGCAGTTCTACTCGAACT GGGTATTCGTTCCGGACTATAGTAACGGTAGCGCGCCCTATGGCGTGTGGAGCGCAGCGTCCGCCACTGTCATGACGTCT TACTACGATGGCACTGATTCATGTGCCGTTTCGGGCATCGTTTGCCAAGACGATGTCGCCGTCATTTTGCTGGCGCCGCA AGGCGGCTCGTACGCGGGTAATAGCGCCGGATGGTATGGCTATGGCTGGAACGGCTATGGCTACAATCCGTCGGGACTCG CCTTAATCGATCAACTCGGTTACCCCGTGGCGCTGGATAGCGGCGTTTTCATGGAGCGCAACGAATCGCAAGGCTACGTA TCCTCTGGCTACTCCAATAATACGATTATTGGATCACTCATGACCGGTGGTTCGAGCGGCGGTCCGTGGCTCGTGAATCT CGGCATGCCGCCGACGCTTAGTGGCACGACTTTCGGTAACTCGGGCGCGCACAATACCGTGGTCGGCGTGACGAGCTGGG GCTTTACGGATCTTGCAGTAAAACAGCAAGGTGCGTCCCCGTTCACGAGTAGCAACATCGTGACGCTCGTGAATACCGTG TGCAGCGGCACACCCGCGGCGTGTTGA
Upstream 100 bases:
>100_bases AATTCGCGGCTGTCTATTAGTTAAGCATCAAATAAAAAAGAGAGTTTGCCTCAATGGCCCATTCGTATGGCGACCTCGCG AAACGGTTAATTCGCCCCGC
Downstream 100 bases:
>100_bases AAGCAGTCAAACGGAATGCGCTGCGCATGTTGTCACGTTTGTTATGCCGATCATGCGCGACAAGCCAGACGCTTCGCGCA GCGCGTCATCCCGTCCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 408; Mature: 408
Protein sequence:
>408_residues MISCKLKALESSKIRISEKSSRTYQGIQMKNFVAKIYIVALGSLIVTSSHSQQIRTHGAVTQITLPEHGSQASSIDFKNA IPIPLPKPIVAPPTMLDSLMYNAKPSLGVPGYSPGGAGDGKQRPMRLVAPMDLNQIGIEPQEFGSSNQPYTTSQVNAYGD NTQYYYPFRPAGKLFFNIGSASYLCSASLIKRGVVVTAAHCVANFGQRQFYSNWVFVPDYSNGSAPYGVWSAASATVMTS YYDGTDSCAVSGIVCQDDVAVILLAPQGGSYAGNSAGWYGYGWNGYGYNPSGLALIDQLGYPVALDSGVFMERNESQGYV SSGYSNNTIIGSLMTGGSSGGPWLVNLGMPPTLSGTTFGNSGAHNTVVGVTSWGFTDLAVKQQGASPFTSSNIVTLVNTV CSGTPAAC
Sequences:
>Translated_408_residues MISCKLKALESSKIRISEKSSRTYQGIQMKNFVAKIYIVALGSLIVTSSHSQQIRTHGAVTQITLPEHGSQASSIDFKNA IPIPLPKPIVAPPTMLDSLMYNAKPSLGVPGYSPGGAGDGKQRPMRLVAPMDLNQIGIEPQEFGSSNQPYTTSQVNAYGD NTQYYYPFRPAGKLFFNIGSASYLCSASLIKRGVVVTAAHCVANFGQRQFYSNWVFVPDYSNGSAPYGVWSAASATVMTS YYDGTDSCAVSGIVCQDDVAVILLAPQGGSYAGNSAGWYGYGWNGYGYNPSGLALIDQLGYPVALDSGVFMERNESQGYV SSGYSNNTIIGSLMTGGSSGGPWLVNLGMPPTLSGTTFGNSGAHNTVVGVTSWGFTDLAVKQQGASPFTSSNIVTLVNTV CSGTPAAC >Mature_408_residues MISCKLKALESSKIRISEKSSRTYQGIQMKNFVAKIYIVALGSLIVTSSHSQQIRTHGAVTQITLPEHGSQASSIDFKNA IPIPLPKPIVAPPTMLDSLMYNAKPSLGVPGYSPGGAGDGKQRPMRLVAPMDLNQIGIEPQEFGSSNQPYTTSQVNAYGD NTQYYYPFRPAGKLFFNIGSASYLCSASLIKRGVVVTAAHCVANFGQRQFYSNWVFVPDYSNGSAPYGVWSAASATVMTS YYDGTDSCAVSGIVCQDDVAVILLAPQGGSYAGNSAGWYGYGWNGYGYNPSGLALIDQLGYPVALDSGVFMERNESQGYV SSGYSNNTIIGSLMTGGSSGGPWLVNLGMPPTLSGTTFGNSGAHNTVVGVTSWGFTDLAVKQQGASPFTSSNIVTLVNTV CSGTPAAC
Specific function: Unknown
COG id: COG3591
COG function: function code E; V8-like Glu-specific endopeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43031; Mature: 43031
Theoretical pI: Translated: 8.02; Mature: 8.02
Prosite motif: PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISCKLKALESSKIRISEKSSRTYQGIQMKNFVAKIYIVALGSLIVTSSHSQQIRTHGAV CCEEEEEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCE TQITLPEHGSQASSIDFKNAIPIPLPKPIVAPPTMLDSLMYNAKPSLGVPGYSPGGAGDG EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC KQRPMRLVAPMDLNQIGIEPQEFGSSNQPYTTSQVNAYGDNTQYYYPFRPAGKLFFNIGS CCCCEEEECCCCHHHHCCCHHHCCCCCCCEEECEEEECCCCCEEEEEECCCCEEEEEECC ASYLCSASLIKRGVVVTAAHCVANFGQRQFYSNWVFVPDYSNGSAPYGVWSAASATVMTS HHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEECCCCEEEEEE YYDGTDSCAVSGIVCQDDVAVILLAPQGGSYAGNSAGWYGYGWNGYGYNPSGLALIDQLG ECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC YPVALDSGVFMERNESQGYVSSGYSNNTIIGSLMTGGSSGGPWLVNLGMPPTLSGTTFGN CCEEECCCEEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCC SGAHNTVVGVTSWGFTDLAVKQQGASPFTSSNIVTLVNTVCSGTPAAC CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MISCKLKALESSKIRISEKSSRTYQGIQMKNFVAKIYIVALGSLIVTSSHSQQIRTHGAV CCEEEEEECCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHEEECCCHHHHHHCCCE TQITLPEHGSQASSIDFKNAIPIPLPKPIVAPPTMLDSLMYNAKPSLGVPGYSPGGAGDG EEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC KQRPMRLVAPMDLNQIGIEPQEFGSSNQPYTTSQVNAYGDNTQYYYPFRPAGKLFFNIGS CCCCEEEECCCCHHHHCCCHHHCCCCCCCEEECEEEECCCCCEEEEEECCCCEEEEEECC ASYLCSASLIKRGVVVTAAHCVANFGQRQFYSNWVFVPDYSNGSAPYGVWSAASATVMTS HHHHHHHHHHHCCHHEEHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCEECCCCEEEEEE YYDGTDSCAVSGIVCQDDVAVILLAPQGGSYAGNSAGWYGYGWNGYGYNPSGLALIDQLG ECCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCC YPVALDSGVFMERNESQGYVSSGYSNNTIIGSLMTGGSSGGPWLVNLGMPPTLSGTTFGN CCEEECCCEEEECCCCCCEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCC SGAHNTVVGVTSWGFTDLAVKQQGASPFTSSNIVTLVNTVCSGTPAAC CCCCCEEEEEECCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA