| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722737
Identifier: 53722737
GI number: 53722737
Start: 2355779
End: 2356051
Strand: Reverse
Name: 53722737
Synonym: BPSS1716
Alternate gene names: NA
Gene position: 2356051-2355779 (Counterclockwise)
Preceding gene: 53722738
Following gene: 53722736
Centisome position: 74.25
GC content: 64.1
Gene sequence:
>273_bases ATGAGCGAATCGTCGCATCAATCCGACCCGCATCGCCGCGCGCGGCTTCGCTGGCGCGCGCGGCGCGGTCTGCTGGAGAA CGATCTGATTTTCGAGCGTTTCTTCGCCAGACACGAGCACGACCTCAGCGACGCAGACGTGAGCGCACTGTCGCGCCTGC TGGATCTAAGCGACAACGACCTGATGGACTTGCTGCTCGCGCGCAAGGAACCAGAGGGCGACCTTGCCGGCCCGGACATG TCCAGGCTGCTGGAGATGCTGCGCAGCGTTTGA
Upstream 100 bases:
>100_bases CACACGATCATGAACTGCGTCGACGTGTGCCCGAAAGGCCTGAACCCGACGAAGGCGATCGGCAAGATCAAGGAATTGAT GGTTCGTCGCGCGGTCTGAC
Downstream 100 bases:
>100_bases GAGCGTTGTGCCCGTTATCGAATCCGTTTCTATTTTCGATTGAGGATGTGTCATGACCCCGTCTGATGTTAAAGCCACGC TATCGTTCAGCGATAATTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 89
Protein sequence:
>90_residues MSESSHQSDPHRRARLRWRARRGLLENDLIFERFFARHEHDLSDADVSALSRLLDLSDNDLMDLLLARKEPEGDLAGPDM SRLLEMLRSV
Sequences:
>Translated_90_residues MSESSHQSDPHRRARLRWRARRGLLENDLIFERFFARHEHDLSDADVSALSRLLDLSDNDLMDLLLARKEPEGDLAGPDM SRLLEMLRSV >Mature_89_residues SESSHQSDPHRRARLRWRARRGLLENDLIFERFFARHEHDLSDADVSALSRLLDLSDNDLMDLLLARKEPEGDLAGPDMS RLLEMLRSV
Specific function: Unknown
COG id: COG2938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0350 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005631 [H]
Pfam domain/function: PF03937 DUF339 [H]
EC number: NA
Molecular weight: Translated: 10470; Mature: 10339
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESSHQSDPHRRARLRWRARRGLLENDLIFERFFARHEHDLSDADVSALSRLLDLSDND CCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH LMDLLLARKEPEGDLAGPDMSRLLEMLRSV HHHHHHHHCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure SESSHQSDPHRRARLRWRARRGLLENDLIFERFFARHEHDLSDADVSALSRLLDLSDND CCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCH LMDLLLARKEPEGDLAGPDMSRLLEMLRSV HHHHHHHHCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]