| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722696
Identifier: 53722696
GI number: 53722696
Start: 2302418
End: 2303440
Strand: Reverse
Name: 53722696
Synonym: BPSS1676
Alternate gene names: NA
Gene position: 2303440-2302418 (Counterclockwise)
Preceding gene: 53722700
Following gene: 53722695
Centisome position: 72.59
GC content: 69.31
Gene sequence:
>1023_bases ATGACCGACACTCCACGCTTTCGAAATCCGATCCGCAGCGAAGTCGATCTCGACGCGAACGGCAAGCATGCCGGCTATCT GCGCGTGCCGCACTCGGTCCATCGTTCGGCGTACGGATGGATTCCGGTTCCGATCGTATCGATCCGCAACGGCAGCGGCC CCGTCGTGCTCGTCATGGCGGGCAACCACGGCGACGAGTACGAAGGGCAGATCGTCGTCTCGCGAATCGTGCGGGAGATC GACGCGCCCCATGTCCGCGGGCAACTGATTTTCCTGCCGATGGCGAATTTCCCGGCGGCGGACGCGGGCACGCGCGTGTC GCCGATCGATGGCGGCAACCTGAACCGCAGCTTTCCCGGCGATCCCGCCGGCGTGCCGACCGCCGTGATCGCCGACTACA TCGAGCACACGCTGCTGCCGCGCGCGCAGTATCTGATCGATCTGCATTCGGGCGGCAGCTCGCTGCTCTATCAGGGCGGC AACCTGCTCGCGCTCGAGCCCCGTGACGCAGCCGAGCGCGCGCGCGTGCGCGCGCTGCTCGCCGCGTTCGGCTTGCCGCG CGCGTTCCTGCATGCGCCGAATCCGGTGCATGCGTCATCGGCCGCGCGTCGGCAGGGCGCGCTCTCGATCCTGACCGAGT TGGGCGGCGGCGGCATGTCGGACCCGGCGCTGATTCGCGACGCCCGTCGCGGCCTGCTGCATTTCCTCGGCTTCGTCGGC GCGCTGCGCGGCCCGCTCGTGCCGGACAGCCCGCCCGCGACGACGCGCTTCATGCGGGTGAGCGGCGCGCATCATTATGT GTACGCCTACGACAAGGGGCTCTACGAGCCGCTCGTCGAGCTGGGCGCACGCGTGCGTGCGGGGCAGCCGGCCGCGCTGA TCCATTTTCCCGATACGCCGCTGCGCGAACCCGTCACGCAGTGCTTCGCGAGCGACGGCGAAGTCGTGTGCAAGCGGGTG CCCGCGCAGGTGCAACGCGGCGATTGCCTGTTCCAGCTCGCGGAAGACGACGCGCCGGCCTGA
Upstream 100 bases:
>100_bases GCGCTCCGCTCCGAGCGACCGCCGACGGTTGCCGACGATTACCGGTAAGCTTCTTTTCACCGCCTTGTTACGCTCCGGCC GCCGCAGGCCGATGCCGACC
Downstream 100 bases:
>100_bases CGGCGCGCTTGCGCGGCCAAGCTGTGCGAAAGTGGGGCGGCCGGACGAGAGAGGCGGCGGGCGGCTTGCCGCGAGCGGAA CGCGCGTCGGCACATCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: Ectoine Utilization Protein EutE; Succinylglutamate Desuccinylase/Aspartoacylase Family; Succinylglutamate Desuccinylase / Aspartoacylase Family; Deacylase; Succinylglutamatedesuccinylase/Aspartoacylase; Succinylglutamate Desuccinylase; AstE/AspA Family Protein; N-Acetyl Diamonbutyric Acid Acylase; Succinate Dehydrogenase Subunit
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MTDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREI DAPHVRGQLIFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGVPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGG NLLALEPRDAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVG ALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRV PAQVQRGDCLFQLAEDDAPA
Sequences:
>Translated_340_residues MTDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREI DAPHVRGQLIFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGVPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGG NLLALEPRDAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVG ALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRV PAQVQRGDCLFQLAEDDAPA >Mature_339_residues TDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMAGNHGDEYEGQIVVSRIVREID APHVRGQLIFLPMANFPAADAGTRVSPIDGGNLNRSFPGDPAGVPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGN LLALEPRDAAERARVRALLAAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVGA LRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTPLREPVTQCFASDGEVVCKRVP AQVQRGDCLFQLAEDDAPA
Specific function: Unknown
COG id: COG3608
COG function: function code R; Predicted deacylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36489; Mature: 36358
Theoretical pI: Translated: 7.78; Mature: 7.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCEEEEEEECCCCCEEEEEE GNHGDEYEGQIVVSRIVREIDAPHVRGQLIFLPMANFPAADAGTRVSPIDGGNLNRSFPG CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCC DPAGVPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPRDAAERARVRALL CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHH AAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVG HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTP HHCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCC LREPVTQCFASDGEVVCKRVPAQVQRGDCLFQLAEDDAPA HHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCC >Mature Secondary Structure TDTPRFRNPIRSEVDLDANGKHAGYLRVPHSVHRSAYGWIPVPIVSIRNGSGPVVLVMA CCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHCCCCCCCEEEEEEECCCCCEEEEEE GNHGDEYEGQIVVSRIVREIDAPHVRGQLIFLPMANFPAADAGTRVSPIDGGNLNRSFPG CCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCC DPAGVPTAVIADYIEHTLLPRAQYLIDLHSGGSSLLYQGGNLLALEPRDAAERARVRALL CCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCEEEECCCCHHHHHHHHHHH AAFGLPRAFLHAPNPVHASSAARRQGALSILTELGGGGMSDPALIRDARRGLLHFLGFVG HHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH ALRGPLVPDSPPATTRFMRVSGAHHYVYAYDKGLYEPLVELGARVRAGQPAALIHFPDTP HHCCCCCCCCCCCCEEEEEECCCEEEEEEECCCHHHHHHHHCCCCCCCCCEEEEECCCCC LREPVTQCFASDGEVVCKRVPAQVQRGDCLFQLAEDDAPA HHHHHHHHHCCCCHHHHHHCCHHHCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA