| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722674
Identifier: 53722674
GI number: 53722674
Start: 2272044
End: 2272613
Strand: Reverse
Name: 53722674
Synonym: BPSS1653
Alternate gene names: NA
Gene position: 2272613-2272044 (Counterclockwise)
Preceding gene: 53722675
Following gene: 53722673
Centisome position: 71.62
GC content: 71.75
Gene sequence:
>570_bases ATGACGGCGCGAGTGGACGTGCGCGCGAGGCTCGACGACAGCCGCTTCGATGCATATCACTGGCGGATCGTCGCGCCGTG CGCGGCGTACCGCGTGATGGACGGCTTCGACGTGCAGGCGACGGGCGGCATCGCGCCCGCCGTGATCCGCGAATGGGGGA TCGCGAAGGAGGCGCTGTCGCCCGCGTTCCGCGCCGGATGGTTCGGGATGCTGATCGGCTCGCTCGTGTTCAGCGCGCTC GCCGCCGTGTTCGCGGCGATTTTCATGACCGGTTTTCCGATCGTCGGCGGACAGCCCGCGCTCAACGTGCTCGCGGCGGT CTACTATCCGGCGCCGCTGCGCTCGACGGGCATCGGCTGGCGTTCCGGCGTCGGCTGGATCGGCTCCGTCGTCGGGCCGG CGCGCGGCGGCGTGCTGATGTATCGGCAATGGTTGTTGTCGTTGCTGTTTCTCGCGGCGGCGGTGCCCGCGTGCGTGTCG ATGGCGGGGATCGGCTTGACCGCGCGTCCGGGCTTCGCCGGCGCGGGCGAGGCGATCGGCGCGCGTGGCGCGGCCGCGGC GGGCGAATGA
Upstream 100 bases:
>100_bases GCGAGGCGCGGACGGCTCGTGCTCGAACTGTAGCTGTAGCGTGAGGCTCGTCGCCCCGGCGCGGGACGGACGAAGACAAC GGCATGGCGGGAGGCGACGT
Downstream 100 bases:
>100_bases TGTCGGCGCGGCGATGACGCAGGGGCGGGCGGCTCGCGCGGCACAGGCGGCTCCCGGGCGAGGCCGGCTTCGGCTCCGAT GCGCATTCGCGGTGTGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: 4-Hydroxybenzoate Transporter; Facilitator Superfamily Protein; Protocatechuate Transmembrane Transporter; 4-Hydroxybenzoate Transporter Transmembrane Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGIAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSAL AAVFAAIFMTGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLLSLLFLAAAVPACVS MAGIGLTARPGFAGAGEAIGARGAAAAGE
Sequences:
>Translated_189_residues MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGIAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSAL AAVFAAIFMTGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLLSLLFLAAAVPACVS MAGIGLTARPGFAGAGEAIGARGAAAAGE >Mature_188_residues TARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGIAPAVIREWGIAKEALSPAFRAGWFGMLIGSLVFSALA AVFAAIFMTGFPIVGGQPALNVLAAVYYPAPLRSTGIGWRSGVGWIGSVVGPARGGVLMYRQWLLSLLFLAAAVPACVSM AGIGLTARPGFAGAGEAIGARGAAAAGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19575; Mature: 19444
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGIAPAVIREWGIAKEALS CCCCEEEHCCCCCCCCCHHHEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHC PAFRAGWFGMLIGSLVFSALAAVFAAIFMTGFPIVGGQPALNVLAAVYYPAPLRSTGIGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC RSGVGWIGSVVGPARGGVLMYRQWLLSLLFLAAAVPACVSMAGIGLTARPGFAGAGEAIG CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC ARGAAAAGE CCCCCCCCC >Mature Secondary Structure TARVDVRARLDDSRFDAYHWRIVAPCAAYRVMDGFDVQATGGIAPAVIREWGIAKEALS CCCEEEHCCCCCCCCCHHHEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHCHHHHHHC PAFRAGWFGMLIGSLVFSALAAVFAAIFMTGFPIVGGQPALNVLAAVYYPAPLRSTGIGW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC RSGVGWIGSVVGPARGGVLMYRQWLLSLLFLAAAVPACVSMAGIGLTARPGFAGAGEAIG CCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHC ARGAAAAGE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA