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The map label for this gene is kinB [H]

Identifier: 53722628

GI number: 53722628

Start: 2181394

End: 2182479

Strand: Reverse

Name: kinB [H]

Synonym: BPSS1605

Alternate gene names: 53722628

Gene position: 2182479-2181394 (Counterclockwise)

Preceding gene: 53722629

Following gene: 53722627

Centisome position: 68.78

GC content: 72.65

Gene sequence:

>1086_bases
TTGAGCGTGCCGCAACGGGCCGATGCCCGAATCTTCGAGGTGATGCAGGCGAGGCAGCCGTGGGGCACGCTCGCGCTCGA
TCGCGACGGCGCGATCGTCGCCGCCACGCGGCGCGCGTACGCGCTGCTCGGCCGCGCGCTGCCGGCCGGGCTGCCGCTCG
CCGCCGTGCTCGGCGAAGCGGTGGGGACGGATTTCGCCGCGCTCGTCGAGGCGCTCGAACCAGGATTCGAATTCGAAACC
GACGACGCGATCCTGTGGCTCACGCTGCAGCCGGTCGAGCACGATCCGGCGATTGCGGCGACGGTCACGGTGGCCGATGT
CACGCCGCTGCGCCGCGCGCTCGACGAACGCGTCGCGTCGCTGCGCTTTCTTGCGCACGATCTGCGTTCGCCGCAGAATT
CGATTCTCGCGCTGACCCAACTGCACGACGCCGATCCCGACGCGTTCGCCGCATGCGGCGGGCTCGAACGGATCGCGCAG
CTCGCGCGGCACGCGCTGCTGCTCGGCCAGGACTATCTCGTCGCGTCGGCGGCGGACGATCTGCGGCAGCGCCACTTCGT
GCGCTTCGACCTGCGCAAGATGCTGCGCGAGCTCGTGCCGAAGCTCGAGGTGAGCGCGGTCTATCGCGGCGTCGCGCTGC
AACTATGGCTCGACGACGCCGCGCCGCTGTGGCTGCGCGGCGCGCGCGTGTTCGTCGCCCGTGCGCTGCAGAATCTGATC
GACAATGCGGTGCAGGCGTCGCGGCAGGGCGCGCGCGTCGAGATCCGGCTGCACGTGCGCGACGTGCACGCGGAAGTGGC
GATCCGCGATTGGGCGGGCGGCCTGCCGGGCCTCGCGACGGATGCGCGGATGACCGATTTCGCGCCGCTCGCCAAGCGCG
GCTCGATGGGCTTCGGCCTCGGGCTGCAGCTCGCCGCGCAGGTGGTGGCCGCGCATGCGGGCACGCTGCACGCCGAATCG
AATCGCGGCGTCGGCACGACGTTCGTGATGCGCTTGCCGATGCTCGCGCCGGCGCCGGGCGCCGTGCCGCCGGCCGTGCC
GGACGGCATCGCGCGCTGGCGCGCGAGCGTCGCGCCGGACGGCTGA

Upstream 100 bases:

>100_bases
CTGGACAAGCGCTTTCGAATCGGGTCACACTGCGCGCTCGCGCCGCCGCGCCGCGGCCTGTCCAATCATTCGCGGATGCC
GAGCTCCGCCGGAGTCGAAC

Downstream 100 bases:

>100_bases
GCGCGCGGGTGCGCGTATTTCCTTTTTCGCTTGAAGATTCTTTTCTTACGATGTCCGAACCGAACATGCAGCGCACCGTG
CAGCAGCCCAAGCAGATCGT

Product: two-component system sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 361; Mature: 360

Protein sequence:

>361_residues
MSVPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAYALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFET
DDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQ
LARHALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLI
DNAVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAES
NRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG

Sequences:

>Translated_361_residues
MSVPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAYALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFET
DDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQ
LARHALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLI
DNAVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAES
NRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG
>Mature_360_residues
SVPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAYALLGRALPAGLPLAAVLGEAVGTDFAALVEALEPGFEFETD
DAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVASLRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQL
ARHALLLGQDYLVASAADDLRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLID
NAVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGLGLQLAAQVVAAHAGTLHAESN
RGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPDG

Specific function: Member of the two-component regulatory system AlgB/KinB involved in regulation of alginate biosynthesis genes. KinB functions as a membrane-associated protein kinase that phosphorylates AlgB, probably in response to environmental signals [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR013656
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF08448 PAS_4 [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 38770; Mature: 38639

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAYALLGRALPAGLPLAAVLGEA
CCCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHH
VGTDFAALVEALEPGFEFETDDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVAS
HCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
LRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLARHALLLGQDYLVASAADD
HHHHHHHHCCCHHHEEEEEHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
LRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DNAVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGL
HHHHHHHCCCCEEEEEEEEEEHHHHHEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
GLQLAAQVVAAHAGTLHAESNRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPD
HHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
G
C
>Mature Secondary Structure 
SVPQRADARIFEVMQARQPWGTLALDRDGAIVAATRRAYALLGRALPAGLPLAAVLGEA
CCCCCHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHCCCCCCHHHHHHHH
VGTDFAALVEALEPGFEFETDDAILWLTLQPVEHDPAIAATVTVADVTPLRRALDERVAS
HCCCHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHH
LRFLAHDLRSPQNSILALTQLHDADPDAFAACGGLERIAQLARHALLLGQDYLVASAADD
HHHHHHHHCCCHHHEEEEEHHCCCCCHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHH
LRQRHFVRFDLRKMLRELVPKLEVSAVYRGVALQLWLDDAAPLWLRGARVFVARALQNLI
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHHHHHHHHH
DNAVQASRQGARVEIRLHVRDVHAEVAIRDWAGGLPGLATDARMTDFAPLAKRGSMGFGL
HHHHHHHCCCCEEEEEEEEEEHHHHHEEHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCH
GLQLAAQVVAAHAGTLHAESNRGVGTTFVMRLPMLAPAPGAVPPAVPDGIARWRASVAPD
HHHHHHHHHHHHCCCEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCC
G
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9218420 [H]