| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yhjS [H]
Identifier: 53722601
GI number: 53722601
Start: 2143303
End: 2145534
Strand: Reverse
Name: yhjS [H]
Synonym: BPSS1579
Alternate gene names: 53722601
Gene position: 2145534-2143303 (Counterclockwise)
Preceding gene: 53722602
Following gene: 53722600
Centisome position: 67.62
GC content: 76.16
Gene sequence:
>2232_bases GTGAAATCCCCGGACCCGGTGCCCGGCCGGCCCGCGAGCGGCGGGGCCGGTGCGCGCGCGCTCGCCCGCCTGCGCGCGTT GTGGCGCGTGTGCTCGCGCGCGGCGCGGCCGCGCGAGCCCGCGCATGCGGCGAACCGGCTCGCGATCGACGCGCTGCCCG ACGAGTGGGCCGAGCTCGCGCCGGGCGGCCTGTATGCGGTGTACGCGGCGGCGCGCACGAGCGCGTGCGACGCGCTGATC TGGGACAGCGTGCGGGACGCGCGCACGCGCGACGTCACGGTGGTGCTCGCGCGCGAGCGCGCGGAGGTCGCGACGCGGCT GCGCGAGCTCGGCTTCGTCGACGGCATGCACGCGCGCGGCTGGCCGCGGCGGTTGAACGTGCTGGCGATGCCGCCGGGCG ATATCGCGGTGCGCGGCGCGGCGCGTGAGGGCGCACCCGCGCCCGCGCCCGTGCCTGCGCCCGCGTTCTCACGCCTCGTC GGCGGCCTGCGCGCGCTGAGGCGCTACCGCTTCCGTTCGAACGCGCTGTATTTCGTCGAAGGCGCGGAGCGCTGGTTCAG TTGGCACGATCCGGTCGCGCTGACGCACGAGGGGTGGGCGCTGGCCGGCTGGTGCCGTTCGCGTCGGATCGCGCTCGTGC TGCTGATCGATCCGCGGGCGTCGCAAGCGGCCGCGAGCCGCGCCGATGCGCGGCACACGGCCCCGCTGCCCGACGCACCC GATGCACCTGACGCATCCGAGGCGGGTGACGGCGTGCTCGGCGGCGCGCGCGCGGAGCACGGCGCCGACGATCGCACCAC GCTCTTCGTCGCCGATCGCACGCGCGCCGCGCGCGGCGGCTTTCACGGCGCGTGCGCGGGCGTCGCGCAATTGCAGCGCA CGCACGGCGAGCTGCGCTGGCGGGTCGATTTCTGGCGCTCGCGCGGCGCGGTCGCCACGGGCGAGGTGCGCGCGCTGCGC TTCATCGGCGACGGACGGCTCGCGGCCGTGCCGGCGGCCGGCGCGCACGCGGCGGGCGGCGGCGCGCGGCTCGCGTTCGA CGAGGCGCGCGTCGTCGTCAGCCGCCGCGTGGTCGAGCGCGAATCGTGGGTGCCGGGCGATTGGGAAGTCGTCGACGACA ACGACGCGGTGCTCGCCGCGTGCGCCGGCGCGCATGCGGCGAGCGCGGTGCTGGCGTTTACCGGCCGCGCGCAGCTCGAA GCGCTGTGCGCGACGATCCATGCGCTGCGCCTGCGGTGCGGCGGCGCGCTGAAGATCGTCGTCGTCGAGCGCGGCGAGGC GATGCGCCATCAATTCGAGCTGCTCGCGCTGAACCTCGGCGCGAACCAGGTCGTCGCGCGCAACCTGCCGTTCTCGCGCG TGCTCGCGGTGCTGCGCTCGCTGCAGGGCCAGTTGCACGCGCGCCCGGTCGCGGCCGACTATCGGGCCGCGCTCGCCGCG TCGCTCGGCGACACGGCGCTCGGCTATCTGCCCGTCGGCGCGTTCTGCTCGCAGGCGCGCGCGGTGCTCGAGCGCAGCGC GGTGCTCGCGCTGTCGCATACGCTCGTGAAGCTGACCCTGCTGCCCGGCGTCGCGCACGCGCACGCGTTGCGCGCGTGCA CGCCGCGCCGCGCGGGCGACGTGCTGACCGCCGACGCGCAGCACCTGTATCTGTTCCTGTTCGCCTGCGAGCTCGCCGAT GCGAACGACGTGCTCGGCCACCTCTTCGACGTGCCTGTCGAGCGGATCTCGGATCGCGTCGTGCATCTCGCGCAGGACAG CATCGAGCATGAGCTGAATGCGCTCGACGCGGCGAACCGGCGTGCGCCGATCGCGGATTACAGCGATCTCTTTTCGCCGG CGGCGGTGGCGACGCGCGCGGCCGGCGCTCCGGCGGCGGCGCGCGACGGCGAACCGTCCGCCGAGTCTATGTCGCCGCAT GTGCCGCCGCATGCGCCGCATGTGTCGGGCGCGCCGACGCCGCCGGGCACGCGCGCCGCGGCGCACGGACCACCGTGGTG CTCGGCGTTCGCGCTGTCGTCCGCATCGCAGACCTCGCGGACATCGCCCGCCTCGGCGCAGATCGTCGTACCGCCGCCGC AGGCGCCGTCGAACGTATCGCACGCGCCGCTGTCCGCGACGCCGCGCGCGCCGCGACCGCGCCGACCGCACGACGCCGGC GCGGTCGCCGGCGTGCGCACCCGCACCGCCACGCGCGACGCGATGCCGTTGCGCCCCAGGGAGGCTGAATGA
Upstream 100 bases:
>100_bases CGCTATGCGTTCGACGCGCGCAAGGACAGCGGCGGCTTCTCGCCGTCGCCGGTCCGACTCTATTCGAGCTACTGATGGAT GCGACATGAACGACTCATGC
Downstream 100 bases:
>100_bases TTTCGCTGATGATCGCCGGCTTTTTCGCCGGCATCGTGATCGCCGTGGCGATCCGGTTTGCCGCGTCGCGCGGCGGCGCG GGCCGCGGGCTGCCGTTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 743; Mature: 743
Protein sequence:
>743_residues MKSPDPVPGRPASGGAGARALARLRALWRVCSRAARPREPAHAANRLAIDALPDEWAELAPGGLYAVYAAARTSACDALI WDSVRDARTRDVTVVLARERAEVATRLRELGFVDGMHARGWPRRLNVLAMPPGDIAVRGAAREGAPAPAPVPAPAFSRLV GGLRALRRYRFRSNALYFVEGAERWFSWHDPVALTHEGWALAGWCRSRRIALVLLIDPRASQAAASRADARHTAPLPDAP DAPDASEAGDGVLGGARAEHGADDRTTLFVADRTRAARGGFHGACAGVAQLQRTHGELRWRVDFWRSRGAVATGEVRALR FIGDGRLAAVPAAGAHAAGGGARLAFDEARVVVSRRVVERESWVPGDWEVVDDNDAVLAACAGAHAASAVLAFTGRAQLE ALCATIHALRLRCGGALKIVVVERGEAMRHQFELLALNLGANQVVARNLPFSRVLAVLRSLQGQLHARPVAADYRAALAA SLGDTALGYLPVGAFCSQARAVLERSAVLALSHTLVKLTLLPGVAHAHALRACTPRRAGDVLTADAQHLYLFLFACELAD ANDVLGHLFDVPVERISDRVVHLAQDSIEHELNALDAANRRAPIADYSDLFSPAAVATRAAGAPAAARDGEPSAESMSPH VPPHAPHVSGAPTPPGTRAAAHGPPWCSAFALSSASQTSRTSPASAQIVVPPPQAPSNVSHAPLSATPRAPRPRRPHDAG AVAGVRTRTATRDAMPLRPREAE
Sequences:
>Translated_743_residues MKSPDPVPGRPASGGAGARALARLRALWRVCSRAARPREPAHAANRLAIDALPDEWAELAPGGLYAVYAAARTSACDALI WDSVRDARTRDVTVVLARERAEVATRLRELGFVDGMHARGWPRRLNVLAMPPGDIAVRGAAREGAPAPAPVPAPAFSRLV GGLRALRRYRFRSNALYFVEGAERWFSWHDPVALTHEGWALAGWCRSRRIALVLLIDPRASQAAASRADARHTAPLPDAP DAPDASEAGDGVLGGARAEHGADDRTTLFVADRTRAARGGFHGACAGVAQLQRTHGELRWRVDFWRSRGAVATGEVRALR FIGDGRLAAVPAAGAHAAGGGARLAFDEARVVVSRRVVERESWVPGDWEVVDDNDAVLAACAGAHAASAVLAFTGRAQLE ALCATIHALRLRCGGALKIVVVERGEAMRHQFELLALNLGANQVVARNLPFSRVLAVLRSLQGQLHARPVAADYRAALAA SLGDTALGYLPVGAFCSQARAVLERSAVLALSHTLVKLTLLPGVAHAHALRACTPRRAGDVLTADAQHLYLFLFACELAD ANDVLGHLFDVPVERISDRVVHLAQDSIEHELNALDAANRRAPIADYSDLFSPAAVATRAAGAPAAARDGEPSAESMSPH VPPHAPHVSGAPTPPGTRAAAHGPPWCSAFALSSASQTSRTSPASAQIVVPPPQAPSNVSHAPLSATPRAPRPRRPHDAG AVAGVRTRTATRDAMPLRPREAE >Mature_743_residues MKSPDPVPGRPASGGAGARALARLRALWRVCSRAARPREPAHAANRLAIDALPDEWAELAPGGLYAVYAAARTSACDALI WDSVRDARTRDVTVVLARERAEVATRLRELGFVDGMHARGWPRRLNVLAMPPGDIAVRGAAREGAPAPAPVPAPAFSRLV GGLRALRRYRFRSNALYFVEGAERWFSWHDPVALTHEGWALAGWCRSRRIALVLLIDPRASQAAASRADARHTAPLPDAP DAPDASEAGDGVLGGARAEHGADDRTTLFVADRTRAARGGFHGACAGVAQLQRTHGELRWRVDFWRSRGAVATGEVRALR FIGDGRLAAVPAAGAHAAGGGARLAFDEARVVVSRRVVERESWVPGDWEVVDDNDAVLAACAGAHAASAVLAFTGRAQLE ALCATIHALRLRCGGALKIVVVERGEAMRHQFELLALNLGANQVVARNLPFSRVLAVLRSLQGQLHARPVAADYRAALAA SLGDTALGYLPVGAFCSQARAVLERSAVLALSHTLVKLTLLPGVAHAHALRACTPRRAGDVLTADAQHLYLFLFACELAD ANDVLGHLFDVPVERISDRVVHLAQDSIEHELNALDAANRRAPIADYSDLFSPAAVATRAAGAPAAARDGEPSAESMSPH VPPHAPHVSGAPTPPGTRAAAHGPPWCSAFALSSASQTSRTSPASAQIVVPPPQAPSNVSHAPLSATPRAPRPRRPHDAG AVAGVRTRTATRDAMPLRPREAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789958, Length=248, Percent_Identity=32.6612903225806, Blast_Score=128, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017745 [H]
Pfam domain/function: PF10995 DUF2819 [H]
EC number: NA
Molecular weight: Translated: 78537; Mature: 78537
Theoretical pI: Translated: 10.02; Mature: 10.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSPDPVPGRPASGGAGARALARLRALWRVCSRAARPREPAHAANRLAIDALPDEWAELA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHC PGGLYAVYAAARTSACDALIWDSVRDARTRDVTVVLARERAEVATRLRELGFVDGMHARG CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCC WPRRLNVLAMPPGDIAVRGAAREGAPAPAPVPAPAFSRLVGGLRALRRYRFRSNALYFVE CCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE GAERWFSWHDPVALTHEGWALAGWCRSRRIALVLLIDPRASQAAASRADARHTAPLPDAP CHHHHCCCCCCEEEEECCCEEEHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCC DAPDASEAGDGVLGGARAEHGADDRTTLFVADRTRAARGGFHGACAGVAQLQRTHGELRW CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCEEE RVDFWRSRGAVATGEVRALRFIGDGRLAAVPAAGAHAAGGGARLAFDEARVVVSRRVVER EEEHHHCCCCEEECCEEEEEEECCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH ESWVPGDWEVVDDNDAVLAACAGAHAASAVLAFTGRAQLEALCATIHALRLRCGGALKIV CCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE VVERGEAMRHQFELLALNLGANQVVARNLPFSRVLAVLRSLQGQLHARPVAADYRAALAA EEECCHHHHHEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLGDTALGYLPVGAFCSQARAVLERSAVLALSHTLVKLTLLPGVAHAHALRACTPRRAGD HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC VLTADAQHLYLFLFACELADANDVLGHLFDVPVERISDRVVHLAQDSIEHELNALDAANR EEECCHHHHEEEEHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAPIADYSDLFSPAAVATRAAGAPAAARDGEPSAESMSPHVPPHAPHVSGAPTPPGTRAA CCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC AHGPPWCSAFALSSASQTSRTSPASAQIVVPPPQAPSNVSHAPLSATPRAPRPRRPHDAG CCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AVAGVRTRTATRDAMPLRPREAE CCCCCEECCCCCCCCCCCCCCCC >Mature Secondary Structure MKSPDPVPGRPASGGAGARALARLRALWRVCSRAARPREPAHAANRLAIDALPDEWAELA CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCEEEECCCHHHHHHC PGGLYAVYAAARTSACDALIWDSVRDARTRDVTVVLARERAEVATRLRELGFVDGMHARG CCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCCCCCCC WPRRLNVLAMPPGDIAVRGAAREGAPAPAPVPAPAFSRLVGGLRALRRYRFRSNALYFVE CCCCCCEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEE GAERWFSWHDPVALTHEGWALAGWCRSRRIALVLLIDPRASQAAASRADARHTAPLPDAP CHHHHCCCCCCEEEEECCCEEEHHHCCCCEEEEEEECCCCHHHHHHHCCCCCCCCCCCCC DAPDASEAGDGVLGGARAEHGADDRTTLFVADRTRAARGGFHGACAGVAQLQRTHGELRW CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHCCCCCHHHHHHHHHHHHCCCEEE RVDFWRSRGAVATGEVRALRFIGDGRLAAVPAAGAHAAGGGARLAFDEARVVVSRRVVER EEEHHHCCCCEEECCEEEEEEECCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHH ESWVPGDWEVVDDNDAVLAACAGAHAASAVLAFTGRAQLEALCATIHALRLRCGGALKIV CCCCCCCCEEECCCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEEE VVERGEAMRHQFELLALNLGANQVVARNLPFSRVLAVLRSLQGQLHARPVAADYRAALAA EEECCHHHHHEEEEEEEECCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH SLGDTALGYLPVGAFCSQARAVLERSAVLALSHTLVKLTLLPGVAHAHALRACTPRRAGD HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCC VLTADAQHLYLFLFACELADANDVLGHLFDVPVERISDRVVHLAQDSIEHELNALDAANR EEECCHHHHEEEEHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC RAPIADYSDLFSPAAVATRAAGAPAAARDGEPSAESMSPHVPPHAPHVSGAPTPPGTRAA CCCCCCHHHHCCHHHHHHHCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC AHGPPWCSAFALSSASQTSRTSPASAQIVVPPPQAPSNVSHAPLSATPRAPRPRRPHDAG CCCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC AVAGVRTRTATRDAMPLRPREAE CCCCCEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]