| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is bcsA
Identifier: 53722598
GI number: 53722598
Start: 2139697
End: 2142237
Strand: Reverse
Name: bcsA
Synonym: BPSS1577
Alternate gene names: 53722598
Gene position: 2142237-2139697 (Counterclockwise)
Preceding gene: 53722599
Following gene: 53722597
Centisome position: 67.51
GC content: 71.31
Gene sequence:
>2541_bases ATGACGGCGCGCGCGGCATGGGGCCGGCGAATCGGCGGCGCGGCGGCGCGCGTGCGCGGCTGGATCGCGCGCGGTCTCGG CGTGCCCGCCAAGGGTTCGTCGTTCGACTGGCTCGTGCGCGTGTTCTTTCACGCGCCCGCGCCGGGCAGGCGCGATGTCG TGCGCGACGGGCTGCGCGCGGCGATTCTGTGGGCCGCCGCGCAATGGGGCGTGACGCAGCCGCGCCGCGCGCGCGATTGG CTCTGGCGCGCGTTCGTGCGCGCGCCGCATGAAAGGCGATCGCGCGCGCGCGATCCGTTCGCATGGATCGACGCGACGCT CGTGCCGGCGTTCATGTTCGCGCGCCGCGCGCGGCGGCGCGTCGACGCCTGGCTCGCCCGTCTGCCGTGGCACCGCTGGG GCGCGCGCCTCGAGCACGGCGCGCAGCGGGCCGTCGCACGCCGCTGGCTGTTGCCGGCGAGCGCGGCGGCGGGCGTTGCG CTGTGGCTCGCGGCCGGCACGTCGCCGCTCGCGCCCGCCGGCCAGTTCGCGTTCTTCGCGACGCTCGCCGCGCTCGCGCT CGCGCTGCGCCGCGTGCCCGGCCGCTTGCCGACGCTCGCGCTCGCGACGTTCGCGCTGCTCGCGATGGCCCGCTACATCT GGTGGCGCAGCACCGAGACGCTCGATTTGCGCACACCGGTCGAGGCGTGCGTCGGCTATCTGCTGTACGCGGCCGAGGCG TACACGTGGCTCATCCTCGTGCTCGGCTTCGTGCAGACCGCGTGGCCGCTCGAGCGCCCGGTCGCGCGCCTGCCGGACGA TCCCGCCGGCTGGCCGAGCGTCGACGTCTACATTCCGACGTACAACGAGCCGCTCGCGGTCGTGAAACCGACGATCTTCG CCGCGCAAAGCCTCGATTGGCCGGCGGACAAGCTCAACGTCTATCTGCTCGACGACGGCCGCCGCCCGGAGTTCGAGGCG TTCGCGCGCGACGCGGGCATCGGCTATCTGACGCGCGACGACAATCGCCACGCGAAGGCCGGCAACATCAATAGCGCGCT TGCGCGCACGCACGGCGAATACATCGCGATCTTCGACTGCGATCACGTGCCGACGCGCTCGTTCCTGCAGACGACGATGG GCGCGTTCCTTCGCGATCCGAACTGTGCGCTCGTGCAGACGCCGCATCATTTCTTCTCGCCGGACCCGTTCGAGCGCAAC CTCGGCACGTTCCGCCGCGTGCCGAACGAGGGCAGCCTGTTCTATGGCCTCGTGCAGGCGGGCAACGATCTGTGGAACGC CGCGTTCTTCTGCGGTTCGTGCGCGGTGCTCAAGCGCGGCCCGCTCGAAGCAATCGGCGGCGTCGCGATCGAGACCGTCA CCGAGGATGCGCACACCGCGCTCAAGCTGCACCGCCGCGGCTACACGAGCGCCTATCTGCCGACCGTGCAGGCCGCCGGC CTCGCGACCGAAAGCCTCGCGGGCCACATCCGGCAGCGCGCGCGCTGGGCGCGCGGGATGGCGCAGATCTTCCGGATCGA CAACCCGTTCGTCGGCCGCGGCCTCGGCTTCTTCCAGCGCGTGTGCTACGGCAACGCGATGCTGCATTTCTTCTACGGCA TCCCGCGGCTCGTGTTCCTGACGATGCCGATCGCGTATCTGTTCTTCCATTTGTATTTCATCAACGCGTCGGCGCTCGCG CTCGCGAGCTACGTGCTGCCGTACATGGCGCTCGCGCACGTCGCGAACGCGCGGATGCAGGGGCGCTTTCGGCATTCGTT CTGGGCCGAGGTGTACGAATCGGTGCTCGCGTGGTACATCGCGCTGCCGACGACGCTCGCGTTCCTGAGCCCGAGGCACG GCCGCTTCAACGTGACCGCGAAGGGCGGGCGCATCGACGAAGGCTACGTCGACTGGGCGACGTCCAGGCCCTATCTCGCG CTGTTCGTGCTGAACGTCGCGGCGATCGCGGCGGGCGGCGTGCGTCTCGCCGCGAGCGGCGGCGACGAAGCGTCGACGAT CCTGATGAACGTCGCGTGGGCGTTGTACAACCTCGCGATGCTCGGCGCGGCGCTCGCGGTCGCGCGCGAGGCGAAACAGG TGCGCGTCACGCACCGGGTCGCGATGCGGGTGCCGGCGACGCTGTTGCTCGCCGACGGCACGACGGCCGCGTGCCACACG AAGGATTATTCGGCGGGCGGCTTGGGGCTCGACGCGGTGCCGCTCGCGCGCATCGCGCTCGGCGATACGCTCGACGTATG CGTGAGCCGCGGCGATCGCCCGTTCCATTTTCCGGTGCGCGTGACCCGCGTCGACGCCGCGCATCTCGGCGTGCAGTTCG AGCCATTGACGCTCGAGCAGGAGCGGCAGCTCGTGCAGTGCACGTTCGGCCGCGCGGATGCGTGGCTCGACTGGCGCGAC GCGCGCGCCGAGCACGACGATGCGCCGCTGCGCGGGCTGAAGGAGGTGCTGTCGATGGGGTTCGAAGGCTACGCACGGAT GCTGCGGGCCGCGACGAGCGCGGTGCGGGCGCGGCGCGCGGCCGACCGGACGCGTCATTGA
Upstream 100 bases:
>100_bases CGCCGCATTCGCAGGCGTCGCACGATCTGCATGGCGTCGCGGGCTGGGTCGGCGCGTGGCTCGACACGCAGGCCGCGCGC AACGCGGCGGGCGCGCGCGC
Downstream 100 bases:
>100_bases CGCGCGGATTCAACTGATGACGGAGTCGCGTCGATGACGTTCTGGAATCTGTATTTCGTTCTGAAGCTCTATCTGTTCGC GGCGGGCCACTTGAAGCCGT
Product: cellulose synthase catalytic subunit (UDP-forming)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 846; Mature: 845
Protein sequence:
>846_residues MTARAAWGRRIGGAAARVRGWIARGLGVPAKGSSFDWLVRVFFHAPAPGRRDVVRDGLRAAILWAAAQWGVTQPRRARDW LWRAFVRAPHERRSRARDPFAWIDATLVPAFMFARRARRRVDAWLARLPWHRWGARLEHGAQRAVARRWLLPASAAAGVA LWLAAGTSPLAPAGQFAFFATLAALALALRRVPGRLPTLALATFALLAMARYIWWRSTETLDLRTPVEACVGYLLYAAEA YTWLILVLGFVQTAWPLERPVARLPDDPAGWPSVDVYIPTYNEPLAVVKPTIFAAQSLDWPADKLNVYLLDDGRRPEFEA FARDAGIGYLTRDDNRHAKAGNINSALARTHGEYIAIFDCDHVPTRSFLQTTMGAFLRDPNCALVQTPHHFFSPDPFERN LGTFRRVPNEGSLFYGLVQAGNDLWNAAFFCGSCAVLKRGPLEAIGGVAIETVTEDAHTALKLHRRGYTSAYLPTVQAAG LATESLAGHIRQRARWARGMAQIFRIDNPFVGRGLGFFQRVCYGNAMLHFFYGIPRLVFLTMPIAYLFFHLYFINASALA LASYVLPYMALAHVANARMQGRFRHSFWAEVYESVLAWYIALPTTLAFLSPRHGRFNVTAKGGRIDEGYVDWATSRPYLA LFVLNVAAIAAGGVRLAASGGDEASTILMNVAWALYNLAMLGAALAVAREAKQVRVTHRVAMRVPATLLLADGTTAACHT KDYSAGGLGLDAVPLARIALGDTLDVCVSRGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRD ARAEHDDAPLRGLKEVLSMGFEGYARMLRAATSAVRARRAADRTRH
Sequences:
>Translated_846_residues MTARAAWGRRIGGAAARVRGWIARGLGVPAKGSSFDWLVRVFFHAPAPGRRDVVRDGLRAAILWAAAQWGVTQPRRARDW LWRAFVRAPHERRSRARDPFAWIDATLVPAFMFARRARRRVDAWLARLPWHRWGARLEHGAQRAVARRWLLPASAAAGVA LWLAAGTSPLAPAGQFAFFATLAALALALRRVPGRLPTLALATFALLAMARYIWWRSTETLDLRTPVEACVGYLLYAAEA YTWLILVLGFVQTAWPLERPVARLPDDPAGWPSVDVYIPTYNEPLAVVKPTIFAAQSLDWPADKLNVYLLDDGRRPEFEA FARDAGIGYLTRDDNRHAKAGNINSALARTHGEYIAIFDCDHVPTRSFLQTTMGAFLRDPNCALVQTPHHFFSPDPFERN LGTFRRVPNEGSLFYGLVQAGNDLWNAAFFCGSCAVLKRGPLEAIGGVAIETVTEDAHTALKLHRRGYTSAYLPTVQAAG LATESLAGHIRQRARWARGMAQIFRIDNPFVGRGLGFFQRVCYGNAMLHFFYGIPRLVFLTMPIAYLFFHLYFINASALA LASYVLPYMALAHVANARMQGRFRHSFWAEVYESVLAWYIALPTTLAFLSPRHGRFNVTAKGGRIDEGYVDWATSRPYLA LFVLNVAAIAAGGVRLAASGGDEASTILMNVAWALYNLAMLGAALAVAREAKQVRVTHRVAMRVPATLLLADGTTAACHT KDYSAGGLGLDAVPLARIALGDTLDVCVSRGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRD ARAEHDDAPLRGLKEVLSMGFEGYARMLRAATSAVRARRAADRTRH >Mature_845_residues TARAAWGRRIGGAAARVRGWIARGLGVPAKGSSFDWLVRVFFHAPAPGRRDVVRDGLRAAILWAAAQWGVTQPRRARDWL WRAFVRAPHERRSRARDPFAWIDATLVPAFMFARRARRRVDAWLARLPWHRWGARLEHGAQRAVARRWLLPASAAAGVAL WLAAGTSPLAPAGQFAFFATLAALALALRRVPGRLPTLALATFALLAMARYIWWRSTETLDLRTPVEACVGYLLYAAEAY TWLILVLGFVQTAWPLERPVARLPDDPAGWPSVDVYIPTYNEPLAVVKPTIFAAQSLDWPADKLNVYLLDDGRRPEFEAF ARDAGIGYLTRDDNRHAKAGNINSALARTHGEYIAIFDCDHVPTRSFLQTTMGAFLRDPNCALVQTPHHFFSPDPFERNL GTFRRVPNEGSLFYGLVQAGNDLWNAAFFCGSCAVLKRGPLEAIGGVAIETVTEDAHTALKLHRRGYTSAYLPTVQAAGL ATESLAGHIRQRARWARGMAQIFRIDNPFVGRGLGFFQRVCYGNAMLHFFYGIPRLVFLTMPIAYLFFHLYFINASALAL ASYVLPYMALAHVANARMQGRFRHSFWAEVYESVLAWYIALPTTLAFLSPRHGRFNVTAKGGRIDEGYVDWATSRPYLAL FVLNVAAIAAGGVRLAASGGDEASTILMNVAWALYNLAMLGAALAVAREAKQVRVTHRVAMRVPATLLLADGTTAACHTK DYSAGGLGLDAVPLARIALGDTLDVCVSRGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQERQLVQCTFGRADAWLDWRDA RAEHDDAPLRGLKEVLSMGFEGYARMLRAATSAVRARRAADRTRH
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multic
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=735, Percent_Identity=51.7006802721088, Blast_Score=794, Evalue=0.0, Organism=Escherichia coli, GI1787259, Length=384, Percent_Identity=22.9166666666667, Blast_Score=69, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 93759; Mature: 93628
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTARAAWGRRIGGAAARVRGWIARGLGVPAKGSSFDWLVRVFFHAPAPGRRDVVRDGLRA CCCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AILWAAAQWGVTQPRRARDWLWRAFVRAPHERRSRARDPFAWIDATLVPAFMFARRARRR HHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VDAWLARLPWHRWGARLEHGAQRAVARRWLLPASAAAGVALWLAAGTSPLAPAGQFAFFA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCHHHHHHH TLAALALALRRVPGRLPTLALATFALLAMARYIWWRSTETLDLRTPVEACVGYLLYAAEA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH YTWLILVLGFVQTAWPLERPVARLPDDPAGWPSVDVYIPTYNEPLAVVKPTIFAAQSLDW HHHHHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCC PADKLNVYLLDDGRRPEFEAFARDAGIGYLTRDDNRHAKAGNINSALARTHGEYIAIFDC CHHHEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC DHVPTRSFLQTTMGAFLRDPNCALVQTPHHFFSPDPFERNLGTFRRVPNEGSLFYGLVQA CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHCCHHHHCCCCCCCEEEHHHHC GNDLWNAAFFCGSCAVLKRGPLEAIGGVAIETVTEDAHTALKLHRRGYTSAYLPTVQAAG CCHHHHHHHHHCCHHHHCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCCCHHCCHHHHHC LATESLAGHIRQRARWARGMAQIFRIDNPFVGRGLGFFQRVCYGNAMLHFFYGIPRLVFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TMPIAYLFFHLYFINASALALASYVLPYMALAHVANARMQGRFRHSFWAEVYESVLAWYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPTTLAFLSPRHGRFNVTAKGGRIDEGYVDWATSRPYLALFVLNVAAIAAGGVRLAASG HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC GDEASTILMNVAWALYNLAMLGAALAVAREAKQVRVTHRVAMRVPATLLLADGTTAACHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEC KDYSAGGLGLDAVPLARIALGDTLDVCVSRGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQ CCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCEECCEEEEEECHHHCCEEECCCCHHH ERQLVQCTFGRADAWLDWRDARAEHDDAPLRGLKEVLSMGFEGYARMLRAATSAVRARRA HHHHHHHHCCCCCCEECHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ADRTRH HHHCCC >Mature Secondary Structure TARAAWGRRIGGAAARVRGWIARGLGVPAKGSSFDWLVRVFFHAPAPGRRDVVRDGLRA CCCCHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH AILWAAAQWGVTQPRRARDWLWRAFVRAPHERRSRARDPFAWIDATLVPAFMFARRARRR HHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH VDAWLARLPWHRWGARLEHGAQRAVARRWLLPASAAAGVALWLAAGTSPLAPAGQFAFFA HHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEECCCCCCCCCHHHHHHH TLAALALALRRVPGRLPTLALATFALLAMARYIWWRSTETLDLRTPVEACVGYLLYAAEA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHHHH YTWLILVLGFVQTAWPLERPVARLPDDPAGWPSVDVYIPTYNEPLAVVKPTIFAAQSLDW HHHHHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEEECCCCCCHHHHCCHHHHHCCCCC PADKLNVYLLDDGRRPEFEAFARDAGIGYLTRDDNRHAKAGNINSALARTHGEYIAIFDC CHHHEEEEEEECCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHCCCCEEEEEEC DHVPTRSFLQTTMGAFLRDPNCALVQTPHHFFSPDPFERNLGTFRRVPNEGSLFYGLVQA CCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHCCHHHHCCCCCCCEEEHHHHC GNDLWNAAFFCGSCAVLKRGPLEAIGGVAIETVTEDAHTALKLHRRGYTSAYLPTVQAAG CCHHHHHHHHHCCHHHHCCCCHHHHCCEEEEEEHHHHHHHHHHHHCCCCCHHCCHHHHHC LATESLAGHIRQRARWARGMAQIFRIDNPFVGRGLGFFQRVCYGNAMLHFFYGIPRLVFL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TMPIAYLFFHLYFINASALALASYVLPYMALAHVANARMQGRFRHSFWAEVYESVLAWYI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALPTTLAFLSPRHGRFNVTAKGGRIDEGYVDWATSRPYLALFVLNVAAIAAGGVRLAASG HHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECC GDEASTILMNVAWALYNLAMLGAALAVAREAKQVRVTHRVAMRVPATLLLADGTTAACHT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEEEC KDYSAGGLGLDAVPLARIALGDTLDVCVSRGDRPFHFPVRVTRVDAAHLGVQFEPLTLEQ CCCCCCCCCCCHHHHHHHHHCCHHHHHHCCCCCCEECCEEEEEECHHHCCEEECCCCHHH ERQLVQCTFGRADAWLDWRDARAEHDDAPLRGLKEVLSMGFEGYARMLRAATSAVRARRA HHHHHHHHCCCCCCEECHHHCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH ADRTRH HHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]