| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722537
Identifier: 53722537
GI number: 53722537
Start: 2068764
End: 2070173
Strand: Reverse
Name: 53722537
Synonym: BPSS1516
Alternate gene names: NA
Gene position: 2070173-2068764 (Counterclockwise)
Preceding gene: 53722538
Following gene: 53722517
Centisome position: 65.24
GC content: 52.34
Gene sequence:
>1410_bases TTGAGTACCGACGATCTCGTCAAAGCGCCACCTGAGCATCGCGCCAAGATGGCTGGCGTGAGGCTAGGCATTGGTTCGGC GGGAGATCGGCTTAACTTCCTTGAACGCAATGGCGTGATGCCGGCAGAAGACAAGGTACTGACAGCCGCTCGCTATGCCC ACAACGTTAAAATCGACCATAAGAACGCTTCAAACCTCGAATTCCAGTTAAATCGCATGAGAATCGGTGAAGTTTCCTTG CCGAAACAGGCAAAGCCTGATTCCATGGAAATACGCAATGCGTTAGATGTAATCCCGTTGGCGCTTCCCGATAGGAACGA AAAGCATACGATACCGACCGATAAATACTTGATGAATCGGCTGTCGTCCGGCGCCGTGGAACAAGCGAGGCATCACGGCT GTGAATTTTTCTGTGGCAGCGGCCGAGATGAGATGCTCAATCACTACGCTCATCGTGGGTTCGATCGTGCCATCAGCATT TCCAGCAACACCTCGACAAAATTCGATTTGCTTTCTAACTCTTCGAATGGTAAATCGCTGCTCGTTCTCAGTGGCATGAG CAGCACCACGCGAATCAAGCATCAACTGTTACAGTTGCATTTTGCCGATGTCGATTTGAATCGAGTCAAACTCGTAGGCG ACATCAATTTGCTAAAGGCAAAAAGCGGAGACGATCTCCGTAAAGAGTTGTCGCAGCTTCCACCGATCCCAAGCAAGACG CTTTTCATCGGCGCCCGTTGGCAAATCATGGAATCTCTCGGGAAACAACTTTTCCATGTCGGCGATTCGGCGAAAGAAGG TACGGGGTATGGCAAGCTCGGCGTGAAAGAACACAAAGTTGCCGATTTTGTATTCGATACCGCAACACTGAATCTCGATG GACGTCAGCATCTCGTTGCCGCGCTGCGTATGCCAAATGGCGATTTGGCTTACGATGCAATGAAAGGATTCCTTGATCAC GGGTTCAATCAGGTCATCATGTGCGGCGCCGGAGGTCGATTGGCAGGCGATGCGCAGGTCGGCGACTACATGCTGCTGGA GCGCAGTCAATATGGAGATCAAAGCATTTCACTCGCACGGGAATGCATCCACGTGCCGGGCGCCAAACTCTTCGAGAATG CTAAACCAACGAGCAATGTCACGGTCGATTCGCCATTGCAAGAAACACAGCGGTGGCTCGACGAGAATCAGGAGACAGGC AATGTCGATGTTGAAACCGCGCATATCCTTCGCGCACTCACGGAAGCTGGACCTGACGTCAAAGTCCTCCCCGGATTGTT CGTATCGGATGTGGTCGGCGAACATCCGCTAGAGGGGAAGATTAGCAGCGACGATGCGTATCGGCGATTGCCGGAATTTG TCACCGCCTCGCTGGGAATGATCCGGGAACAGGACACCCCACTCGCATGA
Upstream 100 bases:
>100_bases GCGGACTACTTCGCAGGAGCAATACGTTCCCGCCGCAGGACCTACAACGCCCAGCACGAGCAATGTCGACGGACGAACGC TCACCGTTCGGCCGTCGACA
Downstream 100 bases:
>100_bases CGTTCGCGACCGAGCACACTGGGGTCGGTTTACATACGGGCGTTTTCGGACATTTCCCCGGAACGAATTTTTTAGTTTGG GGTTGCCACGGGAGGGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSTDDLVKAPPEHRAKMAGVRLGIGSAGDRLNFLERNGVMPAEDKVLTAARYAHNVKIDHKNASNLEFQLNRMRIGEVSL PKQAKPDSMEIRNALDVIPLALPDRNEKHTIPTDKYLMNRLSSGAVEQARHHGCEFFCGSGRDEMLNHYAHRGFDRAISI SSNTSTKFDLLSNSSNGKSLLVLSGMSSTTRIKHQLLQLHFADVDLNRVKLVGDINLLKAKSGDDLRKELSQLPPIPSKT LFIGARWQIMESLGKQLFHVGDSAKEGTGYGKLGVKEHKVADFVFDTATLNLDGRQHLVAALRMPNGDLAYDAMKGFLDH GFNQVIMCGAGGRLAGDAQVGDYMLLERSQYGDQSISLARECIHVPGAKLFENAKPTSNVTVDSPLQETQRWLDENQETG NVDVETAHILRALTEAGPDVKVLPGLFVSDVVGEHPLEGKISSDDAYRRLPEFVTASLGMIREQDTPLA
Sequences:
>Translated_469_residues MSTDDLVKAPPEHRAKMAGVRLGIGSAGDRLNFLERNGVMPAEDKVLTAARYAHNVKIDHKNASNLEFQLNRMRIGEVSL PKQAKPDSMEIRNALDVIPLALPDRNEKHTIPTDKYLMNRLSSGAVEQARHHGCEFFCGSGRDEMLNHYAHRGFDRAISI SSNTSTKFDLLSNSSNGKSLLVLSGMSSTTRIKHQLLQLHFADVDLNRVKLVGDINLLKAKSGDDLRKELSQLPPIPSKT LFIGARWQIMESLGKQLFHVGDSAKEGTGYGKLGVKEHKVADFVFDTATLNLDGRQHLVAALRMPNGDLAYDAMKGFLDH GFNQVIMCGAGGRLAGDAQVGDYMLLERSQYGDQSISLARECIHVPGAKLFENAKPTSNVTVDSPLQETQRWLDENQETG NVDVETAHILRALTEAGPDVKVLPGLFVSDVVGEHPLEGKISSDDAYRRLPEFVTASLGMIREQDTPLA >Mature_468_residues STDDLVKAPPEHRAKMAGVRLGIGSAGDRLNFLERNGVMPAEDKVLTAARYAHNVKIDHKNASNLEFQLNRMRIGEVSLP KQAKPDSMEIRNALDVIPLALPDRNEKHTIPTDKYLMNRLSSGAVEQARHHGCEFFCGSGRDEMLNHYAHRGFDRAISIS SNTSTKFDLLSNSSNGKSLLVLSGMSSTTRIKHQLLQLHFADVDLNRVKLVGDINLLKAKSGDDLRKELSQLPPIPSKTL FIGARWQIMESLGKQLFHVGDSAKEGTGYGKLGVKEHKVADFVFDTATLNLDGRQHLVAALRMPNGDLAYDAMKGFLDHG FNQVIMCGAGGRLAGDAQVGDYMLLERSQYGDQSISLARECIHVPGAKLFENAKPTSNVTVDSPLQETQRWLDENQETGN VDVETAHILRALTEAGPDVKVLPGLFVSDVVGEHPLEGKISSDDAYRRLPEFVTASLGMIREQDTPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51538; Mature: 51407
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDDLVKAPPEHRAKMAGVRLGIGSAGDRLNFLERNGVMPAEDKVLTAARYAHNVKIDH CCCCCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEC KNASNLEFQLNRMRIGEVSLPKQAKPDSMEIRNALDVIPLALPDRNEKHTIPTDKYLMNR CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHH LSSGAVEQARHHGCEFFCGSGRDEMLNHYAHRGFDRAISISSNTSTKFDLLSNSSNGKSL HCCCHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCEE LVLSGMSSTTRIKHQLLQLHFADVDLNRVKLVGDINLLKAKSGDDLRKELSQLPPIPSKT EEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCE LFIGARWQIMESLGKQLFHVGDSAKEGTGYGKLGVKEHKVADFVFDTATLNLDGRQHLVA EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEEECCCHHHHHH ALRMPNGDLAYDAMKGFLDHGFNQVIMCGAGGRLAGDAQVGDYMLLERSQYGDQSISLAR HEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH ECIHVPGAKLFENAKPTSNVTVDSPLQETQRWLDENQETGNVDVETAHILRALTEAGPDV HHHHCCCHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE KVLPGLFVSDVVGEHPLEGKISSDDAYRRLPEFVTASLGMIREQDTPLA EECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure STDDLVKAPPEHRAKMAGVRLGIGSAGDRLNFLERNGVMPAEDKVLTAARYAHNVKIDH CCCCCCCCCCHHHHHHHHEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHEEEEEC KNASNLEFQLNRMRIGEVSLPKQAKPDSMEIRNALDVIPLALPDRNEKHTIPTDKYLMNR CCCCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEEECCCCCCCCCCCHHHHHHHH LSSGAVEQARHHGCEFFCGSGRDEMLNHYAHRGFDRAISISSNTSTKFDLLSNSSNGKSL HCCCHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCCCCCEE LVLSGMSSTTRIKHQLLQLHFADVDLNRVKLVGDINLLKAKSGDDLRKELSQLPPIPSKT EEEECCCHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCHHHHHHHHCCCCCCCE LFIGARWQIMESLGKQLFHVGDSAKEGTGYGKLGVKEHKVADFVFDTATLNLDGRQHLVA EEEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHEEEEEEEEECCCHHHHHH ALRMPNGDLAYDAMKGFLDHGFNQVIMCGAGGRLAGDAQVGDYMLLERSQYGDQSISLAR HEECCCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCCCHHHHHHH ECIHVPGAKLFENAKPTSNVTVDSPLQETQRWLDENQETGNVDVETAHILRALTEAGPDV HHHHCCCHHHHCCCCCCCCCEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCE KVLPGLFVSDVVGEHPLEGKISSDDAYRRLPEFVTASLGMIREQDTPLA EECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA