| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yihX [C]
Identifier: 53722440
GI number: 53722440
Start: 1925626
End: 1926240
Strand: Reverse
Name: yihX [C]
Synonym: BPSS1413
Alternate gene names: 53722440
Gene position: 1926240-1925626 (Counterclockwise)
Preceding gene: 53722449
Following gene: 53722439
Centisome position: 60.71
GC content: 70.73
Gene sequence:
>615_bases ATGACGCAGCCGATCAAGCTGGTGCTGTTCGACATGGAGGGCGTGCTGTCGGATTACGACCGCGCCGCGCGCACCGCGCG CCTGGCCGACCTGACGGGGCGGCCGCCCGAGGCGGTGCGTCACGCGATCTGGGAGTCGGGGCTCGAAGCGCGCGCCGACG CGGGGCGCATCGGCGTCGACCAATACCTGCGCGAGCTGGCGCAATTGCTCGGCGCGCCGGTGAGCCGCGACGATTGGCTG ATCGCGCGCAAGGCGTCGATCACGCCGAATCTGGAGGTCGTCGCGCTGGCGGAGCGCGTCGCGCGGTGCAGCCGGATCGC GGTGCTGACGAACAATTGCCGGCTCGTCACCGATTACATCGATTATCTGAATCCGCCCGTTGCGCGCGTGTTCGGTGCGC ACGTCTATCCGTCCGCGACGTTCGGCGCGGCGAAGCCGGACGCGCAGGCTTACCTCGGCTGCGTCGGCTGGCTCGGCGTG ACGGCACAGGAGACGCTCTTCATCGACGACGCCGATGCGAACGTCGCGGGCGCGGTGAGCGCGGGGCTGCTCGGATGCAA GTTCGTGGGCGCGGGCGCCTTGGCGCAAGAGCTGGCGCGGCGGCGGCTCGCGTAG
Upstream 100 bases:
>100_bases ACGGCTCCGGGGCGGCCAGAATAGAAGTTTTCCGTCGTCCGGAACGGGCCGCCCGCTGGCGGTGCGGCGCTTGCCGGGCG CTTCACGCGAGGCCGAGCGC
Downstream 100 bases:
>100_bases ACGGGCGGCGGCGACGGTTGCGGCCCGGGTGGGCCGGGCCGCGGCGCGGTTGTGTTATTCGAATCGGATTATCCCCATTG GAGCGAGAGGAATCATGTCG
Product: hydrolase protein
Products: NA
Alternate protein names: HAD-Superfamily Hydrolase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase Hydrolase Protein; HAD Family Phosphatase
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTQPIKLVLFDMEGVLSDYDRAARTARLADLTGRPPEAVRHAIWESGLEARADAGRIGVDQYLRELAQLLGAPVSRDDWL IARKASITPNLEVVALAERVARCSRIAVLTNNCRLVTDYIDYLNPPVARVFGAHVYPSATFGAAKPDAQAYLGCVGWLGV TAQETLFIDDADANVAGAVSAGLLGCKFVGAGALAQELARRRLA
Sequences:
>Translated_204_residues MTQPIKLVLFDMEGVLSDYDRAARTARLADLTGRPPEAVRHAIWESGLEARADAGRIGVDQYLRELAQLLGAPVSRDDWL IARKASITPNLEVVALAERVARCSRIAVLTNNCRLVTDYIDYLNPPVARVFGAHVYPSATFGAAKPDAQAYLGCVGWLGV TAQETLFIDDADANVAGAVSAGLLGCKFVGAGALAQELARRRLA >Mature_203_residues TQPIKLVLFDMEGVLSDYDRAARTARLADLTGRPPEAVRHAIWESGLEARADAGRIGVDQYLRELAQLLGAPVSRDDWLI ARKASITPNLEVVALAERVARCSRIAVLTNNCRLVTDYIDYLNPPVARVFGAHVYPSATFGAAKPDAQAYLGCVGWLGVT AQETLFIDDADANVAGAVSAGLLGCKFVGAGALAQELARRRLA
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21877; Mature: 21746
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPIKLVLFDMEGVLSDYDRAARTARLADLTGRPPEAVRHAIWESGLEARADAGRIGVD CCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHH QYLRELAQLLGAPVSRDDWLIARKASITPNLEVVALAERVARCSRIAVLTNNCRLVTDYI HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCEEHHHHH DYLNPPVARVFGAHVYPSATFGAAKPDAQAYLGCVGWLGVTAQETLFIDDADANVAGAVS HHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH AGLLGCKFVGAGALAQELARRRLA HHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure TQPIKLVLFDMEGVLSDYDRAARTARLADLTGRPPEAVRHAIWESGLEARADAGRIGVD CCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCCCCCCHH QYLRELAQLLGAPVSRDDWLIARKASITPNLEVVALAERVARCSRIAVLTNNCRLVTDYI HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHEEEECCCEEHHHHH DYLNPPVARVFGAHVYPSATFGAAKPDAQAYLGCVGWLGVTAQETLFIDDADANVAGAVS HHCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHH AGLLGCKFVGAGALAQELARRRLA HHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA