| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722426
Identifier: 53722426
GI number: 53722426
Start: 1912775
End: 1913344
Strand: Reverse
Name: 53722426
Synonym: BPSS1399
Alternate gene names: NA
Gene position: 1913344-1912775 (Counterclockwise)
Preceding gene: 53722439
Following gene: 53722425
Centisome position: 60.3
GC content: 62.28
Gene sequence:
>570_bases ATGAAAGCCGATACGCCGGATTACATGCAATGCCGTCCCGAGATCGTCGGTGGGTTGATCGAGACGGTATCCACTGCGCT TCTGCGGACATTTCCGAAAGTGACGGCGGACCCGTACGACATTGAACTGATTCTCGATGCGCTACGGGTGATGCGTCCGA ACGTGGTCGAGATTCAGATGCTCGACGGTGTGTTGTACATGGCGTGCGGGCGTTGGGACGATGCGATTCGCATCCTGTCC GAGGTTTGTGCGACCGCGCCGCACTTCGGCTATGGGAAGGCCCTGCTCGCATTCTGTCTGTCGACGAAGGGCGACGACGC ATGGAAACAGCACGCCGCCGAGGCGCTGGAAAGCAGTCCGAACGACGACACGTTAGTGCTCGTAAAGGCGCTTCAGGCGC GCGAGGATATGGTGAAGGCGGTACAGGCAAACCGCAACGGCGGCCCGTTCGTGCCGCCGCAGTCGGTCTGCGAACTGAAT GCCGAGCTCGAGCGCTCGGCGCCGCAGGCCGAGCAGCCGATCGCCGAGCGGGTCGAAGTGGCGCAGTACGGCGCCACGTT GCGTGCATGA
Upstream 100 bases:
>100_bases GGATGCCGCGCATCGAAGATTGCTAAGGTTCAGCCGTGTATAGCGGCATGCGGGGCGCGCCGCGTGGATCGAATGACCTT CAGGTTCAGGAGAGTAAGAA
Downstream 100 bases:
>100_bases GCGGCGTCTCGCCTTCCGCTTTTTTCGAGATCGGACATGAACATGGATGTCAGCCGTACCGCGCTGCAGTTGTCGCTTGA GCAACTCACGAACGGGACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 189
Protein sequence:
>189_residues MKADTPDYMQCRPEIVGGLIETVSTALLRTFPKVTADPYDIELILDALRVMRPNVVEIQMLDGVLYMACGRWDDAIRILS EVCATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSPNDDTLVLVKALQAREDMVKAVQANRNGGPFVPPQSVCELN AELERSAPQAEQPIAERVEVAQYGATLRA
Sequences:
>Translated_189_residues MKADTPDYMQCRPEIVGGLIETVSTALLRTFPKVTADPYDIELILDALRVMRPNVVEIQMLDGVLYMACGRWDDAIRILS EVCATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSPNDDTLVLVKALQAREDMVKAVQANRNGGPFVPPQSVCELN AELERSAPQAEQPIAERVEVAQYGATLRA >Mature_189_residues MKADTPDYMQCRPEIVGGLIETVSTALLRTFPKVTADPYDIELILDALRVMRPNVVEIQMLDGVLYMACGRWDDAIRILS EVCATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSPNDDTLVLVKALQAREDMVKAVQANRNGGPFVPPQSVCELN AELERSAPQAEQPIAERVEVAQYGATLRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20689; Mature: 20689
Theoretical pI: Translated: 4.47; Mature: 4.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKADTPDYMQCRPEIVGGLIETVSTALLRTFPKVTADPYDIELILDALRVMRPNVVEIQM CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHH LDGVLYMACGRWDDAIRILSEVCATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC NDDTLVLVKALQAREDMVKAVQANRNGGPFVPPQSVCELNAELERSAPQAEQPIAERVEV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH AQYGATLRA HHHHHHHCC >Mature Secondary Structure MKADTPDYMQCRPEIVGGLIETVSTALLRTFPKVTADPYDIELILDALRVMRPNVVEIQM CCCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEHHH LDGVLYMACGRWDDAIRILSEVCATAPHFGYGKALLAFCLSTKGDDAWKQHAAEALESSP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC NDDTLVLVKALQAREDMVKAVQANRNGGPFVPPQSVCELNAELERSAPQAEQPIAERVEV CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHH AQYGATLRA HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA