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The map label for this gene is sctL

Identifier: 53722422

GI number: 53722422

Start: 1909854

End: 1910723

Strand: Reverse

Name: sctL

Synonym: BPSS1395

Alternate gene names: NA

Gene position: 1910723-1909854 (Counterclockwise)

Preceding gene: 53722423

Following gene: 53722421

Centisome position: 60.22

GC content: 65.86

Gene sequence:

>870_bases
ATGGCTATTTGGTTGAGACGTCCCCGGATCGCTGAAATGGGGCCGATCACGCCGAACAGCTGCGCTCGACTCGGCTTTTC
CGGCGATGTTGTGCCGCGCGAATGCTTTGGTGAACTGATGACGATCGAGTCCGCCTATGCGGCGCTCGACGCGGACCGCG
ACGCCGTGCTCGCTGCCGCCCGTCAGGAAGCCGACAGAGTGATGGCGGAGGCAGTGGCGAGAACGGAAGAGATGATCGCC
GCCGCACAGAGCGAATACGATGCGGCTGCCGAGCGCGGCTATCGAGACGGCTACGACCAAGCGTTCGGCAAGTGGATGGA
TCGCCTGGCCGATGTCGCGGACGCGCAGAACCGACTGCAACTGCGAATGCGCGAGCGGCTGGCCGACATCGTCGCATCGG
CGGTCGAGCAAATCGTGCGCGCCGAAAGCCGCGAGACGCTATTCAAGCGCGCGTTGGCATCGGTCGAGCGAATCGTGGAC
GGCGCGACATATTTGCGTGTCGTCGTGCACGAGAACGATCTGGATCAGGCGAGAGCGATCTTCGGCACGCTCGAAGCGCG
CTGGCGCGAGTTCGGCCGCCCGATCGCGATGTCGGTGGTGGCGGACAAGCGGCTTGCTCCAGGCAGTTGCGTATGCGAGT
CCGATTTCGGCGCAATCGATGCGAGCCTGGATACGCAGCTGCGCGCGATGCGCGGCGCCGTCGCGCGTGCGCTCAAGCGT
TCGATTGAAGAAGCCGGCGCGAACGAGTGCGATGCGACACGCCGTGACGAATCGATCGGCATCGAGACGGATCGGGACGG
CGAGCGTGACGCACGGAACGCCGAGCAGGATGCGGGGGACGCGGGCGCGAGCGCGGGGGGGCGGGCATGA

Upstream 100 bases:

>100_bases
TGGCCACGCCTCATTGGCTGGCCGAATTGGCCCCACGGCTCGACGCGTTCGGCGGCGAGCATCTCTTCGCTCGACTGCCT
CGATTATTGCCGGAGTACGC

Downstream 100 bases:

>100_bases
GCGCGGACGAGCCCTTGCGCACGGCCGAATTCAGCCACCTGGCGGATGCGATCGAGCGGGAAATTCTCGCGGTGTCGGGT
GTCGTGCGCACGGGCCGGGT

Product: type III secretion system protein HrpB

Products: NA

Alternate protein names: HrpE/YscL Family Type III Secretion Apparatus Protein; Type III Secretion Apparatus Protein HrpE/YscL Family; TypeIII Secretion Cytoplasmic Protein SctL; Flagellar Biosynthesis/Type III Secretory Pathway Protein

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MAIWLRRPRIAEMGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIA
AAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVD
GATYLRVVVHENDLDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKR
SIEEAGANECDATRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA

Sequences:

>Translated_289_residues
MAIWLRRPRIAEMGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIA
AAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVD
GATYLRVVVHENDLDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKR
SIEEAGANECDATRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
>Mature_288_residues
AIWLRRPRIAEMGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAARQEADRVMAEAVARTEEMIAA
AQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQLRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDG
ATYLRVVVHENDLDQARAIFGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKRS
IEEAGANECDATRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA

Specific function: Unknown

COG id: COG1317

COG function: function code NU; Flagellar biosynthesis/type III secretory pathway protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31562; Mature: 31430

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIWLRRPRIAEMGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAA
CCEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RQEADRVMAEAVARTEEMIAAAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHENDLDQARAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHH
FGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
SIEEAGANECDATRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
AIWLRRPRIAEMGPITPNSCARLGFSGDVVPRECFGELMTIESAYAALDADRDAVLAAA
CEECCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHH
RQEADRVMAEAVARTEEMIAAAQSEYDAAAERGYRDGYDQAFGKWMDRLADVADAQNRLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LRMRERLADIVASAVEQIVRAESRETLFKRALASVERIVDGATYLRVVVHENDLDQARAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHH
FGTLEARWREFGRPIAMSVVADKRLAPGSCVCESDFGAIDASLDTQLRAMRGAVARALKR
HHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
SIEEAGANECDATRRDESIGIETDRDGERDARNAEQDAGDAGASAGGRA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA