| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
Click here to switch to the map view.
The map label for this gene is 53722411
Identifier: 53722411
GI number: 53722411
Start: 1891215
End: 1892744
Strand: Reverse
Name: 53722411
Synonym: BPSS1384
Alternate gene names: NA
Gene position: 1892744-1891215 (Counterclockwise)
Preceding gene: 53722412
Following gene: 53722410
Centisome position: 59.65
GC content: 60.65
Gene sequence:
>1530_bases ATGAAGACAAATTCGATAACCGGTTCGTCGCGAGTGGGGCTTCGGGATAATGATGCGTCTGCATCGGAATCGCTGTTGGG CAATAACGAGCACCAACCTACTAAACTGAACAGATCGGAAATGTTCAGCAGCCTGCGCGACTTGTCGAAGCCATGCGGTG ACGGTCGGGAGATCAAAGTTCAATTCAAGGCCAAGTCGGCGCCGGAATTGAACGCTGACTCAACGGCGGATGTGCATCTC CCGTCGACGCGAAATGCCGAACATGTGCCCGAGGGGCGTTTGGAGAATACCGGATCCTTGCAGGAAGGAGGCTCGGCCGA CCGGGTGGAACCCGAGGCGAGCAATGCGCCGTCCCGCACGAGCCATGGTGTCGAACCAGGAGGCGAAGGCGAACGGGTAA GCCGGGCGAGCGCCAATGAGGGCGTCGGGCATGCAGCCTTGAGCATGCTGAAAAATGGGATGAGAAATGTCGGCGCGGTG GCGGCGCGCAATTTGGTGAGCGTTTTACCCCAGACTGCCGCTCGTGAAGCGGTGCGCGCGTATTTGACGCCGGCTTTAGC CGCCGCACCCGCAGGAGTCGCCACTGCTGCGGGTGCGGTGGCGGCGGCGGCGCCGATCGTCCAGAACTTTGTCGGACTGG TCAGGGACATTCAAAATGGCACGTCCAGTCGCACCCGCGTCATTTCTCGAACCGCGATGATGGTCACCACTGGCGGTTTC CTCGCCGCGTCGGCGGCAACCGGTACCCTCGCCGCCGCGGCGCCGGCCCTGGTTGCCGCCAATGCGATCTATACGCCGCT TAGAGATTTGGTCCAATACAACGTACAACTGAAGGATAATAATCAGCAGCCGGCAAATATGAAACGGGTCCTTGGATCGG CGGCTGCATATGGCGTGAATCAGGGGCTCGTCAATGAAGCCATGGATCGGGTGGCGGGCGCGGCGCGTGGAAGGTTCGAA GCGGAAACGTCCGTCCAGTCCGGTGTGACGACCGACGGGACACCGCAGGTCAGCACCGCTGCTCTCGAAACACACACGAA CCCATCCGCGAGCCTTGGCGTGGATGTGCCGAGCAGTGGGTATGTACTCGCTCGATCAGCGGGTTTCGCCGCGGCGAATT TTGCCGGCGAAACATTGGATGAGCTGACGCTTCGCGGCGCAACTGCATTACAGCAGGGCAATCTGTCCAACCTTCAAATA AGCGTCGGGTGGCGGCCTCAAGACGAGCGGACCTGGAGTGCGGTAGCGGATCAGGCGTTCACGACCAATGCGGCGCGCAG CACCCTCTTCGCCAACGCCTATATGGGTGCCTACGCTATTCCTTCGCCTCCCGGTGCCGCAAGCGATGCTGTTGTCGGCT CGATTCTCGGCGGGTTGTACACGGCATTTATAAAAGTACATGACACGCCACAGCGAGCCCTGCCAGACGAAGAGCGCGGA ATCGACGAGCTGGCGTCGACGGGGCGCGGTCGGGAAAATGCCGCGGTATTGACCATTGAAGACGAAACCAGATCGACGAG CGGAGTCTGA
Upstream 100 bases:
>100_bases GTCTCGGCGCCGAATTTAAGTAAGCAAAAGCGCCGATTTCGCAAGTGGTTTGCCAGGTTTCCTGGACATGTAGTGTTCGC CAATTGAAACGGAATAAATC
Downstream 100 bases:
>100_bases CTTGCGCATTGAACGGCGAATGGCCCGCTTGCGCTGCGGTTTCAGGCGGGTTTTGGCTGAGGTAATCGCCTTGTATATCG GGTTGATTGTATTTTCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MKTNSITGSSRVGLRDNDASASESLLGNNEHQPTKLNRSEMFSSLRDLSKPCGDGREIKVQFKAKSAPELNADSTADVHL PSTRNAEHVPEGRLENTGSLQEGGSADRVEPEASNAPSRTSHGVEPGGEGERVSRASANEGVGHAALSMLKNGMRNVGAV AARNLVSVLPQTAAREAVRAYLTPALAAAPAGVATAAGAVAAAAPIVQNFVGLVRDIQNGTSSRTRVISRTAMMVTTGGF LAASAATGTLAAAAPALVAANAIYTPLRDLVQYNVQLKDNNQQPANMKRVLGSAAAYGVNQGLVNEAMDRVAGAARGRFE AETSVQSGVTTDGTPQVSTAALETHTNPSASLGVDVPSSGYVLARSAGFAAANFAGETLDELTLRGATALQQGNLSNLQI SVGWRPQDERTWSAVADQAFTTNAARSTLFANAYMGAYAIPSPPGAASDAVVGSILGGLYTAFIKVHDTPQRALPDEERG IDELASTGRGRENAAVLTIEDETRSTSGV
Sequences:
>Translated_509_residues MKTNSITGSSRVGLRDNDASASESLLGNNEHQPTKLNRSEMFSSLRDLSKPCGDGREIKVQFKAKSAPELNADSTADVHL PSTRNAEHVPEGRLENTGSLQEGGSADRVEPEASNAPSRTSHGVEPGGEGERVSRASANEGVGHAALSMLKNGMRNVGAV AARNLVSVLPQTAAREAVRAYLTPALAAAPAGVATAAGAVAAAAPIVQNFVGLVRDIQNGTSSRTRVISRTAMMVTTGGF LAASAATGTLAAAAPALVAANAIYTPLRDLVQYNVQLKDNNQQPANMKRVLGSAAAYGVNQGLVNEAMDRVAGAARGRFE AETSVQSGVTTDGTPQVSTAALETHTNPSASLGVDVPSSGYVLARSAGFAAANFAGETLDELTLRGATALQQGNLSNLQI SVGWRPQDERTWSAVADQAFTTNAARSTLFANAYMGAYAIPSPPGAASDAVVGSILGGLYTAFIKVHDTPQRALPDEERG IDELASTGRGRENAAVLTIEDETRSTSGV >Mature_509_residues MKTNSITGSSRVGLRDNDASASESLLGNNEHQPTKLNRSEMFSSLRDLSKPCGDGREIKVQFKAKSAPELNADSTADVHL PSTRNAEHVPEGRLENTGSLQEGGSADRVEPEASNAPSRTSHGVEPGGEGERVSRASANEGVGHAALSMLKNGMRNVGAV AARNLVSVLPQTAAREAVRAYLTPALAAAPAGVATAAGAVAAAAPIVQNFVGLVRDIQNGTSSRTRVISRTAMMVTTGGF LAASAATGTLAAAAPALVAANAIYTPLRDLVQYNVQLKDNNQQPANMKRVLGSAAAYGVNQGLVNEAMDRVAGAARGRFE AETSVQSGVTTDGTPQVSTAALETHTNPSASLGVDVPSSGYVLARSAGFAAANFAGETLDELTLRGATALQQGNLSNLQI SVGWRPQDERTWSAVADQAFTTNAARSTLFANAYMGAYAIPSPPGAASDAVVGSILGGLYTAFIKVHDTPQRALPDEERG IDELASTGRGRENAAVLTIEDETRSTSGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52502; Mature: 52502
Theoretical pI: Translated: 5.96; Mature: 5.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNSITGSSRVGLRDNDASASESLLGNNEHQPTKLNRSEMFSSLRDLSKPCGDGREIKV CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE QFKAKSAPELNADSTADVHLPSTRNAEHVPEGRLENTGSLQEGGSADRVEPEASNAPSRT EEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SHGVEPGGEGERVSRASANEGVGHAALSMLKNGMRNVGAVAARNLVSVLPQTAAREAVRA CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLTPALAAAPAGVATAAGAVAAAAPIVQNFVGLVRDIQNGTSSRTRVISRTAMMVTTGGF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCH LAASAATGTLAAAAPALVAANAIYTPLRDLVQYNVQLKDNNQQPANMKRVLGSAAAYGVN HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCH QGLVNEAMDRVAGAARGRFEAETSVQSGVTTDGTPQVSTAALETHTNPSASLGVDVPSSG HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC YVLARSAGFAAANFAGETLDELTLRGATALQQGNLSNLQISVGWRPQDERTWSAVADQAF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH TTNAARSTLFANAYMGAYAIPSPPGAASDAVVGSILGGLYTAFIKVHDTPQRALPDEERG HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHCCCCHHCC IDELASTGRGRENAAVLTIEDETRSTSGV HHHHHHCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MKTNSITGSSRVGLRDNDASASESLLGNNEHQPTKLNRSEMFSSLRDLSKPCGDGREIKV CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE QFKAKSAPELNADSTADVHLPSTRNAEHVPEGRLENTGSLQEGGSADRVEPEASNAPSRT EEEECCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC SHGVEPGGEGERVSRASANEGVGHAALSMLKNGMRNVGAVAARNLVSVLPQTAAREAVRA CCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLTPALAAAPAGVATAAGAVAAAAPIVQNFVGLVRDIQNGTSSRTRVISRTAMMVTTGGF HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEECCCH LAASAATGTLAAAAPALVAANAIYTPLRDLVQYNVQLKDNNQQPANMKRVLGSAAAYGVN HEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHCCH QGLVNEAMDRVAGAARGRFEAETSVQSGVTTDGTPQVSTAALETHTNPSASLGVDVPSSG HHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCC YVLARSAGFAAANFAGETLDELTLRGATALQQGNLSNLQISVGWRPQDERTWSAVADQAF EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHH TTNAARSTLFANAYMGAYAIPSPPGAASDAVVGSILGGLYTAFIKVHDTPQRALPDEERG HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCHHHCCCCHHCC IDELASTGRGRENAAVLTIEDETRSTSGV HHHHHHCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA