Click here to switch to the map view.

The map label for this gene is 53722401

Identifier: 53722401

GI number: 53722401

Start: 1880830

End: 1881387

Strand: Reverse

Name: 53722401

Synonym: BPSS1375

Alternate gene names: NA

Gene position: 1881387-1880830 (Counterclockwise)

Preceding gene: 53722402

Following gene: 53722400

Centisome position: 59.29

GC content: 69.18

Gene sequence:

>558_bases
ATGCGCGAGACGAACGACAAACAGCAGCGCGGGAACGTCACGCAACGGCACGACACGCCGGCTGCGCCGGGCGGCAACCG
GGTCACGCAGGCATTCGAGCGGTTCGCCGCGCGCGTCACGCAGTGGGCCGGCTCGCCCGTCGCGTTCGGCGTCGCGGTCG
CGATCACGATCGGATGGCTCGCGTGCGGGCCGCTCGTCCATTTCTCCGACGCGTGGCAGCTCGTCATCAACACCGGTACG
ACGATCATCACGTTTCTGATGGTGTTCCTGCTCCAGCGCAACCAGAATCGGGACAGCGTCGCGCTGCATCTGAAGCTCGA
CGAGCTGGTCGCGGCGACGAAATCCGCGAGCAACCGGCTGATCGGCATCGAGGATGCGTCGGAGGACGAGCTCAAGCGGC
TTGCGCACGCCTATCTGGAGCTCGCGCTGCGGGCGCGGACGCTGCGCGAGACGAGCGGCGAGCCCGCGCGGCGGGACGCG
GACGCCGACAGTGACGGTGACGGAGACGGAGACGACGCCGCGAGCGAGGCGCAAGAGCGTCCCACGCCCGCCGATTGA

Upstream 100 bases:

>100_bases
TACCGGTTCGCGCATGCGGGGCGGGCGGCGCGCCCCCGCCGGCGACGCGCGAGCGGGCGGCGACGGAGGACCGTTTCGCC
GCTTTCATGGAGAGCGGATC

Downstream 100 bases:

>100_bases
CGCGGGCGCGGCCCGGTGCGGCGCGCGTGGCGGCGGCATTCGCGAACCGAGGCGCGCACCGATGAAGCACGCTTCGATTC
GTCCGTGCCGGTGCGCATTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT
TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA
DADSDGDGDGDDAASEAQERPTPAD

Sequences:

>Translated_185_residues
MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT
TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA
DADSDGDGDGDDAASEAQERPTPAD
>Mature_185_residues
MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWLACGPLVHFSDAWQLVINTGT
TIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRLIGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDA
DADSDGDGDGDDAASEAQERPTPAD

Specific function: Unknown

COG id: COG5478

COG function: function code S; Predicted small integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20109; Mature: 20109

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWL
CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ACGPLVHFSDAWQLVINTGTTIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRL
HHCCHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCE
IGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDADADSDGDGDGDDAASEAQER
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PTPAD
CCCCC
>Mature Secondary Structure
MRETNDKQQRGNVTQRHDTPAAPGGNRVTQAFERFAARVTQWAGSPVAFGVAVAITIGWL
CCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ACGPLVHFSDAWQLVINTGTTIITFLMVFLLQRNQNRDSVALHLKLDELVAATKSASNRL
HHCCHHHHCCHHEEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHCCCCE
IGIEDASEDELKRLAHAYLELALRARTLRETSGEPARRDADADSDGDGDGDDAASEAQER
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHCC
PTPAD
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA