| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722376
Identifier: 53722376
GI number: 53722376
Start: 1845044
End: 1846363
Strand: Reverse
Name: 53722376
Synonym: BPSS1351
Alternate gene names: NA
Gene position: 1846363-1845044 (Counterclockwise)
Preceding gene: 53722377
Following gene: 53722375
Centisome position: 58.19
GC content: 75.61
Gene sequence:
>1320_bases ATGGCTAAAGTAATCGTGACGGCGATCGGGTCGGCGGGGGACGTGCACCCGCTGCTGGGGGTGAGCCGGGCGCTGGCCGC GCGCGGCCACGACGTGGTGTTCTGCACGCATGCGCCGTTCGAGGCGGCGGTGCGCGCGAGCGGCTTCGCGTTCGTGCCGG TGGGCACGGCCGAGGCGTATGCGCAGGCGATGGCGGACCCGGCGCTGTGGGATCCGCGCACGTCGTTCCGGACGCTGTGG CGGGTGATCGCGCCGGTGCTGCGGCCGCACTTCGATACGCTGCGCGCGCTGAGCGACGCGGACACGGTGCTGGTGGGCAC GCTGTGGGCGTTCTCGGCGCGGCTGATGCAGGAGCGCTTCGGCGCGCGCTACGTGTCGGTGCAGGTGTCGCCGTCGACGC TGCTGTCGGCGCACGCGCCGCCGACGCACAAGCGGCTGACGATCCCGAAGGGACTGCCGCTGGCGGTGAAGGCGGGGCTG ATGACGCTGATCGAGCGGCAGGTGCTGGACCGGGTGTGCGGCCCGGAGCTGAACGCGGCGCGGCGGGCGCTGGGGCTGGC GCCGGCCCGGCGGATCCTGGGGCGGTGGTTGCATTCGACGGACGGGGTGCTGTGCCTGTTTCCGCCGTGGTTCGCGCCGG CGCAGCCGGACTGGCCGGCGAATCACCTGCAAAGCGGGTTTGCGCTGTTCAACGACGTGGGGCCGGTGCCGGCGGATGCG GAGCTGGACGCGTTCGTCGCGTCGGGCGAGGCGCCGGTGGTGTTCACGGCGGGCTCGACGCTGGTGGACGGGCGCGCGTA CGAGCGGGCGGTGACGCAGGTGCTGCGGGCGACGGGCGTGCGGGGGATCCTGCTCGCGCCGGACGCGCCGGCGGCATCGG ATGGGACGACGGGGCCAAGGGAGAGGGCGGCGGAGACGACGGCGCGGGCGAATGGCGCGGCGCTGCTCAAGCGCCGCTAC GTGCCGCTCGCGGCGCTGCTGCCGCGGTGCCGGGCGCTGGTGCATCACGGCGGGATCGGCACGGCGTCGCTGGCGTACGC GGCGGGCGTGCCGCAGGTGGTGACGCCGTTCGCGCACGATCAGTTCGACAACGCGCAGCGGGTGGCGGCGAGCGGCTGCG GGGTGCGGCTGGACGCGCCGGTGCGCGGCGAGCCGCTGGCACGGGCATTGGCGCGGGTGCTGGGCGACGCGGCGATGGCC GCGCGCTGCGCCGAGGTGCGCGCGCGCATGGCGGCGCAGCCCGACGGCTGCGACGAGGCGGCGCGCTTCATCGAGCGCTT CGCGCCGGGCGTCGCGGCGCGGCAGGCGCAGCCGGCATGA
Upstream 100 bases:
>100_bases CCGGCGGGGCGCATCCCGGCCGGCGATGGACGATCCGGTTCGAACAGGGACTGCGGCGAACGGCGCCGGCGACTGCCGCG CGGAAGGGAATGACGAGGCG
Downstream 100 bases:
>100_bases GCGCGCCGGCGAGACCGGCGGCGGCGGCCGCGAACGGCGCGGGGGCGCGCGAGCCGGCCGCGGCGCGCCCGCTGCGCGGC GCGAAGCTCGCGCTGCTGAC
Product: rhamnosyltransferase protein
Products: NA
Alternate protein names: Glycosyl Transferase Family; Rhamnosyltransferase I Subunit B; Family; Rhamnosyltransferase Chain B; Rhamnosyltransferase Protein; Rhamnosyltransferase Gt1B; Glycosyltransferase; Glycosyltransferase MGT Family; Glucosyltransferase
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MAKVIVTAIGSAGDVHPLLGVSRALAARGHDVVFCTHAPFEAAVRASGFAFVPVGTAEAYAQAMADPALWDPRTSFRTLW RVIAPVLRPHFDTLRALSDADTVLVGTLWAFSARLMQERFGARYVSVQVSPSTLLSAHAPPTHKRLTIPKGLPLAVKAGL MTLIERQVLDRVCGPELNAARRALGLAPARRILGRWLHSTDGVLCLFPPWFAPAQPDWPANHLQSGFALFNDVGPVPADA ELDAFVASGEAPVVFTAGSTLVDGRAYERAVTQVLRATGVRGILLAPDAPAASDGTTGPRERAAETTARANGAALLKRRY VPLAALLPRCRALVHHGGIGTASLAYAAGVPQVVTPFAHDQFDNAQRVAASGCGVRLDAPVRGEPLARALARVLGDAAMA ARCAEVRARMAAQPDGCDEAARFIERFAPGVAARQAQPA
Sequences:
>Translated_439_residues MAKVIVTAIGSAGDVHPLLGVSRALAARGHDVVFCTHAPFEAAVRASGFAFVPVGTAEAYAQAMADPALWDPRTSFRTLW RVIAPVLRPHFDTLRALSDADTVLVGTLWAFSARLMQERFGARYVSVQVSPSTLLSAHAPPTHKRLTIPKGLPLAVKAGL MTLIERQVLDRVCGPELNAARRALGLAPARRILGRWLHSTDGVLCLFPPWFAPAQPDWPANHLQSGFALFNDVGPVPADA ELDAFVASGEAPVVFTAGSTLVDGRAYERAVTQVLRATGVRGILLAPDAPAASDGTTGPRERAAETTARANGAALLKRRY VPLAALLPRCRALVHHGGIGTASLAYAAGVPQVVTPFAHDQFDNAQRVAASGCGVRLDAPVRGEPLARALARVLGDAAMA ARCAEVRARMAAQPDGCDEAARFIERFAPGVAARQAQPA >Mature_438_residues AKVIVTAIGSAGDVHPLLGVSRALAARGHDVVFCTHAPFEAAVRASGFAFVPVGTAEAYAQAMADPALWDPRTSFRTLWR VIAPVLRPHFDTLRALSDADTVLVGTLWAFSARLMQERFGARYVSVQVSPSTLLSAHAPPTHKRLTIPKGLPLAVKAGLM TLIERQVLDRVCGPELNAARRALGLAPARRILGRWLHSTDGVLCLFPPWFAPAQPDWPANHLQSGFALFNDVGPVPADAE LDAFVASGEAPVVFTAGSTLVDGRAYERAVTQVLRATGVRGILLAPDAPAASDGTTGPRERAAETTARANGAALLKRRYV PLAALLPRCRALVHHGGIGTASLAYAAGVPQVVTPFAHDQFDNAQRVAASGCGVRLDAPVRGEPLARALARVLGDAAMAA RCAEVRARMAAQPDGCDEAARFIERFAPGVAARQAQPA
Specific function: Unknown
COG id: COG1819
COG function: function code GC; Glycosyl transferases, related to UDP-glucuronosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46291; Mature: 46159
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKVIVTAIGSAGDVHPLLGVSRALAARGHDVVFCTHAPFEAAVRASGFAFVPVGTAEAY CCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEEEECCCHHHH AQAMADPALWDPRTSFRTLWRVIAPVLRPHFDTLRALSDADTVLVGTLWAFSARLMQERF HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GARYVSVQVSPSTLLSAHAPPTHKRLTIPKGLPLAVKAGLMTLIERQVLDRVCGPELNAA CCEEEEEEECHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH RRALGLAPARRILGRWLHSTDGVLCLFPPWFAPAQPDWPANHLQSGFALFNDVGPVPADA HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ELDAFVASGEAPVVFTAGSTLVDGRAYERAVTQVLRATGVRGILLAPDAPAASDGTTGPR CHHHHHCCCCCCEEEECCCCEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCH ERAAETTARANGAALLKRRYVPLAALLPRCRALVHHGGIGTASLAYAAGVPQVVTPFAHD HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCHHHC QFDNAQRVAASGCGVRLDAPVRGEPLARALARVLGDAAMAARCAEVRARMAAQPDGCDEA CCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ARFIERFAPGVAARQAQPA HHHHHHHCCCHHCCCCCCC >Mature Secondary Structure AKVIVTAIGSAGDVHPLLGVSRALAARGHDVVFCTHAPFEAAVRASGFAFVPVGTAEAY CEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHCCCEEEEECCCHHHH AQAMADPALWDPRTSFRTLWRVIAPVLRPHFDTLRALSDADTVLVGTLWAFSARLMQERF HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH GARYVSVQVSPSTLLSAHAPPTHKRLTIPKGLPLAVKAGLMTLIERQVLDRVCGPELNAA CCEEEEEEECHHHHHCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH RRALGLAPARRILGRWLHSTDGVLCLFPPWFAPAQPDWPANHLQSGFALFNDVGPVPADA HHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC ELDAFVASGEAPVVFTAGSTLVDGRAYERAVTQVLRATGVRGILLAPDAPAASDGTTGPR CHHHHHCCCCCCEEEECCCCEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCH ERAAETTARANGAALLKRRYVPLAALLPRCRALVHHGGIGTASLAYAAGVPQVVTPFAHD HHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHCCHHHC QFDNAQRVAASGCGVRLDAPVRGEPLARALARVLGDAAMAARCAEVRARMAAQPDGCDEA CCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH ARFIERFAPGVAARQAQPA HHHHHHHCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA