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The map label for this gene is rfbF [H]

Identifier: 53722374

GI number: 53722374

Start: 1842237

End: 1843232

Strand: Reverse

Name: rfbF [H]

Synonym: BPSS1349

Alternate gene names: 53722374

Gene position: 1843232-1842237 (Counterclockwise)

Preceding gene: 53722375

Following gene: 53722373

Centisome position: 58.09

GC content: 73.09

Gene sequence:

>996_bases
ATGACGACCTTGGGCGCGCTGGTGATTCTGTATTACCCGACCGACGAGCAACTGTCGGGCCTGGAGGCGCTCGCGCGCGA
CAGCGACGCGCTCGCGGTGATCGACAACACGCCGCACGAGCACGCGGCGGCGCGCGAGCGGGTGCGCGCGCTGGCGGCGC
GGGCGCACGGCGAAGCGCGCGTCGTGTGGCGGCACCACGGCAACCGCGGCGGGGTGGCGGGCGCGTACAACGCGGGGCTG
TCGGCGCTGTTCGCGCAGGGCATGGAGGCGGTCGCGCTGTTCGACCAGGACTCGACGGTGCCGGCCGCGTACTTCGCGCG
GATGCGCGACGCGTGCGCGCAACTGGGTACGCAACCGGGCGCGCACGCGGGCGCGTTCATCGCGGGCCCGCGGATCTACG
ACGCGAACGAGCAGCGCTTCCTGCCGGAGCTGATGACGAGCGGGGTGGCGGTGCGCCGCGTGCGGGTGGAAGGCGAGCGC
GCGCCGCAGCGCTGCGCGTTCCTGATCTCGTCGGGCAGCGTGATCTCGCGGGGCGCGTACGCGCGGCTCGGCCGCTTCGA
CGAGGCGCTGTTCATCGACCATGTCGACACCGAGTACTGCCTGCGCGCGCTGGCGCACAACGTGCCGCTGTACGTGGTGC
CGTCGCTGGTGCTGACGCACCGGATCGGCGCGCGGCGCCGGCACAAGGTGGGGCCGTTCGAGCTGACGGCGATGCACCAT
GGGGGGCTGCGCCGATACTACGGCGCGCGCAACGCGATGCAGCTGGGGCTGCAGTACGGGTTGCGGTTTCCGGTGGCGCT
GGTGCCGAATCTGCTGACGATCTGGCAGGTGGTCCAGGTGGTGCTGTGCGAGCGGGAGAAGGGCGCGAAGCTGCGCGGGA
TCGCGCTGGGCGTGCTCGACGGGGTGTTCGGGCGCCTGGGGTCGTTCGAGGCGGCGCGCGCGGGCCACCGCACGGCACGC
GAGGAGGCGATGCGCGAAGCGCGGCAGCAGTCGTGA

Upstream 100 bases:

>100_bases
GACGAAGCCGAACGGAGAAGCATCGAAGTCCTGACGATGCGGTGCGTCGCCGCGACGGCGAAGCGGGCATGCCGGACCTC
GAACCACCGAAGGAAGAGCG

Downstream 100 bases:

>100_bases
GACGCGGCGCGCGGACCCCAGCGTCAGCACGACGCGATGAGCGCGGTGAAGGGACAACGGCTCGACCGGGCGCGCATGGC
ATCCCCGCCGCCGTATCGAT

Product: dTDP-rhamnosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 330

Protein sequence:

>331_residues
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALAARAHGEARVVWRHHGNRGGVAGAYNAGL
SALFAQGMEAVALFDQDSTVPAAYFARMRDACAQLGTQPGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGER
APQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTAMHH
GGLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGHRTAR
EEAMREARQQS

Sequences:

>Translated_331_residues
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALAARAHGEARVVWRHHGNRGGVAGAYNAGL
SALFAQGMEAVALFDQDSTVPAAYFARMRDACAQLGTQPGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGER
APQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTAMHH
GGLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGHRTAR
EEAMREARQQS
>Mature_330_residues
TTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALAARAHGEARVVWRHHGNRGGVAGAYNAGLS
ALFAQGMEAVALFDQDSTVPAAYFARMRDACAQLGTQPGAHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGERA
PQRCAFLISSGSVISRGAYARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTAMHHG
GLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLDGVFGRLGSFEAARAGHRTARE
EAMREARQQS

Specific function: Unknown

COG id: COG1216

COG function: function code R; Predicted glycosyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173
- InterPro:   IPR006446 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 36171; Mature: 36040

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALAARAHGEAR
CCCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
VVWRHHGNRGGVAGAYNAGLSALFAQGMEAVALFDQDSTVPAAYFARMRDACAQLGTQPG
EEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
AHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGERAPQRCAFLISSGSVISRGAY
CCCCCEEECCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEECCCCHHCCHH
ARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTAMHH
HHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
GGLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLD
CCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVFGRLGSFEAARAGHRTAREEAMREARQQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTLGALVILYYPTDEQLSGLEALARDSDALAVIDNTPHEHAAARERVRALAARAHGEAR
CCCEEEEEEEECCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCEE
VVWRHHGNRGGVAGAYNAGLSALFAQGMEAVALFDQDSTVPAAYFARMRDACAQLGTQPG
EEEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCC
AHAGAFIAGPRIYDANEQRFLPELMTSGVAVRRVRVEGERAPQRCAFLISSGSVISRGAY
CCCCCEEECCEEECCCHHHHHHHHHHCCCEEEEEEECCCCCHHHHEEEEECCCCHHCCHH
ARLGRFDEALFIDHVDTEYCLRALAHNVPLYVVPSLVLTHRIGARRRHKVGPFELTAMHH
HHHCCCCCCCEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECC
GGLRRYYGARNAMQLGLQYGLRFPVALVPNLLTIWQVVQVVLCEREKGAKLRGIALGVLD
CCHHHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH
GVFGRLGSFEAARAGHRTAREEAMREARQQS
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7507920; 12384590; 12704152 [H]