| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is srpH [H]
Identifier: 53722369
GI number: 53722369
Start: 1834030
End: 1835019
Strand: Reverse
Name: srpH [H]
Synonym: BPSS1344
Alternate gene names: 53722369
Gene position: 1835019-1834030 (Counterclockwise)
Preceding gene: 53722370
Following gene: 53722368
Centisome position: 57.83
GC content: 69.6
Gene sequence:
>990_bases GTGGCGGTATTCGACATCGACGACATCGTTCAATCGCTTCAAACCGTGCGCCAGCGTTGGCGCGAAGTGCAGCGCCGCTC GCTCGAGCCGGGCGGGCGCGAATTGCCGGCGCGCGAGGCGCTTGCCGGCATCGTCGAGACGTTCAAGGGCGTGCTGTTTC CGATGCGCCTCGGGCCGCCCGATCTTCGGCAGGAGAGTGAAAATTTCTATGTGAGCCACGCGCTCGACGACGCATTGCAT GCGCTTCTCGCGCAGGCTCGGCTCGAATTGCGCTACAAGGGCCGACACGATGCCGACGCGCCCGCCGAAGCCGCGATCGA CGCGAAAGCCGATGCGGCGGTGCGCGCGTTCGCCGCGCGCCTGCCCGATATCCGCGCGCTGCTCGACAGCGACGTGCTGG CCGCGTTTCACGGCGATCCGGCCGCGGGCAGCGTCGACGAGGTGCTGCTTTGCTACCCCGGCGTGCTGGCGATGATCCAT CACCGGCTCGCGCACGCGCTGTATCGCCTCGAATTGCCGCTGCTCGCGCGCATCGTCGCCGAGCATGCGCACGCGCAGAC GGGGATCGACATTCATCCCGGCGCGCAGATCGGCGGCGGATTCTTCATCGATCACGGCACGGGCGTCGTGATCGGCGAGA CCGCGGTGATCGGCGAGCGCGTGCGCGTCTATCAGGCGGTCACGCTCGGCGCGAAGCGCTTTCCGAGGGACGCGTCCGGG CATCTCGAAAAGGGACTCGCGCGCCACCCGATCGTCGAGGACGATGTCGTCGTCTATGCGGGCGCGACGATTCTCGGCCG CGTGACGATCGGCAAGGGCGCGGTGATCGGCGGCAACGTGTGGATCACGCAGGACGTCCCGCCCGGCAGCCATGTCACGC AAGCCGTCACGCGCAGCGATCCGGCGCGGCCGGCCGACGCGGCCGCCTCGTCGCCGCGGCCGGCCGGCGCGCACGACGCG ACGCTTTCTGCCGCGCAGGCGCTGCGATGA
Upstream 100 bases:
>100_bases GCGCCGGGATCGCCGGCGCGCGGGCCGGGGCCGACGGGCGGCGGGAAACAGGTGGCGGGAAGCATCCGGCAACAGCGGAA AGCAACAAGGAGCGGCAGCC
Downstream 100 bases:
>100_bases CGGCGCTCGTCCAGCGCTTCGGCGCGGCGATCCGCCAGTTGCGCGAGGCGCGCGCGTGGTCGCAGGAGCAGCTCGCGGAA CACGCGGGGTTGAACCGCTC
Product: serine acetyltransferase
Products: NA
Alternate protein names: SAT [H]
Number of amino acids: Translated: 329; Mature: 328
Protein sequence:
>329_residues MAVFDIDDIVQSLQTVRQRWREVQRRSLEPGGRELPAREALAGIVETFKGVLFPMRLGPPDLRQESENFYVSHALDDALH ALLAQARLELRYKGRHDADAPAEAAIDAKADAAVRAFAARLPDIRALLDSDVLAAFHGDPAAGSVDEVLLCYPGVLAMIH HRLAHALYRLELPLLARIVAEHAHAQTGIDIHPGAQIGGGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPRDASG HLEKGLARHPIVEDDVVVYAGATILGRVTIGKGAVIGGNVWITQDVPPGSHVTQAVTRSDPARPADAAASSPRPAGAHDA TLSAAQALR
Sequences:
>Translated_329_residues MAVFDIDDIVQSLQTVRQRWREVQRRSLEPGGRELPAREALAGIVETFKGVLFPMRLGPPDLRQESENFYVSHALDDALH ALLAQARLELRYKGRHDADAPAEAAIDAKADAAVRAFAARLPDIRALLDSDVLAAFHGDPAAGSVDEVLLCYPGVLAMIH HRLAHALYRLELPLLARIVAEHAHAQTGIDIHPGAQIGGGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPRDASG HLEKGLARHPIVEDDVVVYAGATILGRVTIGKGAVIGGNVWITQDVPPGSHVTQAVTRSDPARPADAAASSPRPAGAHDA TLSAAQALR >Mature_328_residues AVFDIDDIVQSLQTVRQRWREVQRRSLEPGGRELPAREALAGIVETFKGVLFPMRLGPPDLRQESENFYVSHALDDALHA LLAQARLELRYKGRHDADAPAEAAIDAKADAAVRAFAARLPDIRALLDSDVLAAFHGDPAAGSVDEVLLCYPGVLAMIHH RLAHALYRLELPLLARIVAEHAHAQTGIDIHPGAQIGGGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPRDASGH LEKGLARHPIVEDDVVVYAGATILGRVTIGKGAVIGGNVWITQDVPPGSHVTQAVTRSDPARPADAAASSPRPAGAHDAT LSAAQALR
Specific function: Cysteine biosynthesis. [C]
COG id: COG1045
COG function: function code E; Serine acetyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1790035, Length=222, Percent_Identity=34.6846846846847, Blast_Score=101, Evalue=7e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011004 [H]
Pfam domain/function: NA
EC number: =2.3.1.30 [H]
Molecular weight: Translated: 35113; Mature: 34982
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVFDIDDIVQSLQTVRQRWREVQRRSLEPGGRELPAREALAGIVETFKGVLFPMRLGPP CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCH DLRQESENFYVSHALDDALHALLAQARLELRYKGRHDADAPAEAAIDAKADAAVRAFAAR HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHH LPDIRALLDSDVLAAFHGDPAAGSVDEVLLCYPGVLAMIHHRLAHALYRLELPLLARIVA CCHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHAHAQTGIDIHPGAQIGGGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPRDASG HHHHHHCCCEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC HLEKGLARHPIVEDDVVVYAGATILGRVTIGKGAVIGGNVWITQDVPPGSHVTQAVTRSD HHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHCCC PARPADAAASSPRPAGAHDATLSAAQALR CCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure AVFDIDDIVQSLQTVRQRWREVQRRSLEPGGRELPAREALAGIVETFKGVLFPMRLGPP CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCH DLRQESENFYVSHALDDALHALLAQARLELRYKGRHDADAPAEAAIDAKADAAVRAFAAR HHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHHHHHH LPDIRALLDSDVLAAFHGDPAAGSVDEVLLCYPGVLAMIHHRLAHALYRLELPLLARIVA CCHHHHHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHAHAQTGIDIHPGAQIGGGFFIDHGTGVVIGETAVIGERVRVYQAVTLGAKRFPRDASG HHHHHHCCCEECCCCCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCC HLEKGLARHPIVEDDVVVYAGATILGRVTIGKGAVIGGNVWITQDVPPGSHVTQAVTRSD HHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCEEEECCEEEECCCCCCHHHHHHHHCCC PARPADAAASSPRPAGAHDATLSAAQALR CCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7603442 [H]