| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53722197
Identifier: 53722197
GI number: 53722197
Start: 1560517
End: 1562109
Strand: Reverse
Name: 53722197
Synonym: BPSS1169
Alternate gene names: NA
Gene position: 1562109-1560517 (Counterclockwise)
Preceding gene: 53722198
Following gene: 53722196
Centisome position: 49.23
GC content: 67.67
Gene sequence:
>1593_bases GTGACGAGCCAATATTTCCTCAAGAAGAACGTCAAGATCGAGCCGCTGGTCAACCGCTGGCACGCCAATCCATGGCTCGT GTATCCGCCGACGGCGGCTTATCTGATGCGGCATCACCTCGAGATCATGACGTCGTTCGTCAAGCACGCGGCGCTGCACG AGAAGGCGGCCGCCAGCCGGAAGATTCGCGGCGGCCCGTTCGTGCAGGGGCTCAACGCGCAGGACGTGCCGGCGATGGAG GCGCTGATCGAGACCACGCGGCGCGACGGCGCGCATCTGTTCGGGCTCGCCGACGATCTCGACGCGCTCGGCGCGACGCT CGGCGCCGCCGACGGCCACAGCCTCGTTCCGTTCTACGAGCAGGTGCCGCCGCGCTTGCGCGGGATGGTGGAGCTCGCGT ATCAGGCGGGCAACCGCGCGTACGCGCGGCTGATGGAGGGGCTGTACTACGACGCATACGATACGAGCGCGCTGCAGTCG TTCGCGCTCGCGCCGCTGTGGGACGACAGCCGGCCGTTCTGCCTCAGCACGCCGCGGCTCGACACGAGCGACGACGTGCT GCTCGACCTCCCGTTCGCGGACCCGCTCGCGGTCGCGCTGACGGCGTCGCGCCGCAACGGGCTCACGCCCGCGCAATTCG AGGCGCTGCTCGATCGCCGCTCGAAGGGCACGCGCGCCGACGCGGTGGCCGCGCTGTTCTCGGACACCGCGCCGCCGCGC GGCGCGGCCGACGCGCACGAGCCGCGCGTGCGCTACTTCGGCCACGCCTGCGTGCTCGTGCAGACCGGCTCGGAGAACCT GCTGTTCGATCCGCTGATCAGCTACCCGTTTCCCGGACAATCGCCGCGCTTCACGTTCGACGATTTGCCCGACGTGATCG ACTACGTCGTGATCACCCATTCACATCACGATCACTTCGTGCTCGAGACGCTGCTGCAGATTCGCGATCGCGTGAAGACG ATCGTGGTGCCGCAGAACACGCACGGACAACTGATGGACCCGTCGCTCAAGCATACCGCGCACGCGCTCGGGTTCGAGAA CGTCATCATGATGAGCGAGTTCGACACGCTCGAGCTCGGCGGCGGCAAGCTGCATGCGGTGCCGTTCCTCGGCGAGCACG GCGACCTCGACATCCGCAGCAAGCTCGGCTTTCTCGTCGAGGCGGGCGATCGGCGCGTGCTGATGGTCGCGGACAGCAAC AACCTCGACGACAGGCTCTACGAGCACGTTCGCCGCCGCTACGGCAAGGTCGATCTGCTGTTCATCGGCATGGAGTGCGA GGGCGCGCCGGTGTCGTGGCTGTACGGGCCGATGCTCGACACGAAGCTCGCGCGTTCGATGGACGACAGCCGGCGGCTCA ACGGCTCCGGCTCCAGCGCGGGCTTGCGGCTGGCCGAGATCGTCGGCGCGGATCGCGTGTTCATCTATGCGATGGCGCAG GAGCCGTGGCTCACGTTCATCAGCAGCCTCGAATACGACGAGAGCTCGTTCGCGATGCGCGAGGCGAGAAAGATGATCGC CGCGTGCGGGCAGGCGGGCATCGACGCGTGCCTGCTCAACGGCTGCGTCGACATTGCGCTGGGCGCGCGGTGA
Upstream 100 bases:
>100_bases CGCGCGCATCGGGCTGGGCGGCCGCGCCGCGGCAGCCGCGCAAGCGAGCGCGCCGGCGCCCGAAGTCGAGAGATTTGACA ACCTTTAAAGCGAGATTGCA
Downstream 100 bases:
>100_bases CCGGATGGATCGCGCTCATCGCAGCCCGGCGGGGCCGGTCGACACGCTGCTCGACGGGCTGATCGCCAAGAATGCGTATT ATCCGCGCCGCATCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Antibiotic Biosynthesis Protein; Thioester Reductase; Beta-Lactamase Domain-Containing Protein; Beta-Lactamase Domain Protein; Tyrosine Beta-Hydroxylase
Number of amino acids: Translated: 530; Mature: 529
Protein sequence:
>530_residues MTSQYFLKKNVKIEPLVNRWHANPWLVYPPTAAYLMRHHLEIMTSFVKHAALHEKAAASRKIRGGPFVQGLNAQDVPAME ALIETTRRDGAHLFGLADDLDALGATLGAADGHSLVPFYEQVPPRLRGMVELAYQAGNRAYARLMEGLYYDAYDTSALQS FALAPLWDDSRPFCLSTPRLDTSDDVLLDLPFADPLAVALTASRRNGLTPAQFEALLDRRSKGTRADAVAALFSDTAPPR GAADAHEPRVRYFGHACVLVQTGSENLLFDPLISYPFPGQSPRFTFDDLPDVIDYVVITHSHHDHFVLETLLQIRDRVKT IVVPQNTHGQLMDPSLKHTAHALGFENVIMMSEFDTLELGGGKLHAVPFLGEHGDLDIRSKLGFLVEAGDRRVLMVADSN NLDDRLYEHVRRRYGKVDLLFIGMECEGAPVSWLYGPMLDTKLARSMDDSRRLNGSGSSAGLRLAEIVGADRVFIYAMAQ EPWLTFISSLEYDESSFAMREARKMIAACGQAGIDACLLNGCVDIALGAR
Sequences:
>Translated_530_residues MTSQYFLKKNVKIEPLVNRWHANPWLVYPPTAAYLMRHHLEIMTSFVKHAALHEKAAASRKIRGGPFVQGLNAQDVPAME ALIETTRRDGAHLFGLADDLDALGATLGAADGHSLVPFYEQVPPRLRGMVELAYQAGNRAYARLMEGLYYDAYDTSALQS FALAPLWDDSRPFCLSTPRLDTSDDVLLDLPFADPLAVALTASRRNGLTPAQFEALLDRRSKGTRADAVAALFSDTAPPR GAADAHEPRVRYFGHACVLVQTGSENLLFDPLISYPFPGQSPRFTFDDLPDVIDYVVITHSHHDHFVLETLLQIRDRVKT IVVPQNTHGQLMDPSLKHTAHALGFENVIMMSEFDTLELGGGKLHAVPFLGEHGDLDIRSKLGFLVEAGDRRVLMVADSN NLDDRLYEHVRRRYGKVDLLFIGMECEGAPVSWLYGPMLDTKLARSMDDSRRLNGSGSSAGLRLAEIVGADRVFIYAMAQ EPWLTFISSLEYDESSFAMREARKMIAACGQAGIDACLLNGCVDIALGAR >Mature_529_residues TSQYFLKKNVKIEPLVNRWHANPWLVYPPTAAYLMRHHLEIMTSFVKHAALHEKAAASRKIRGGPFVQGLNAQDVPAMEA LIETTRRDGAHLFGLADDLDALGATLGAADGHSLVPFYEQVPPRLRGMVELAYQAGNRAYARLMEGLYYDAYDTSALQSF ALAPLWDDSRPFCLSTPRLDTSDDVLLDLPFADPLAVALTASRRNGLTPAQFEALLDRRSKGTRADAVAALFSDTAPPRG AADAHEPRVRYFGHACVLVQTGSENLLFDPLISYPFPGQSPRFTFDDLPDVIDYVVITHSHHDHFVLETLLQIRDRVKTI VVPQNTHGQLMDPSLKHTAHALGFENVIMMSEFDTLELGGGKLHAVPFLGEHGDLDIRSKLGFLVEAGDRRVLMVADSNN LDDRLYEHVRRRYGKVDLLFIGMECEGAPVSWLYGPMLDTKLARSMDDSRRLNGSGSSAGLRLAEIVGADRVFIYAMAQE PWLTFISSLEYDESSFAMREARKMIAACGQAGIDACLLNGCVDIALGAR
Specific function: Unknown
COG id: COG2220
COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58612; Mature: 58480
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSQYFLKKNVKIEPLVNRWHANPWLVYPPTAAYLMRHHLEIMTSFVKHAALHEKAAASR CCCCCEECCCCEECHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KIRGGPFVQGLNAQDVPAMEALIETTRRDGAHLFGLADDLDALGATLGAADGHSLVPFYE CCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHH QVPPRLRGMVELAYQAGNRAYARLMEGLYYDAYDTSALQSFALAPLWDDSRPFCLSTPRL HCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCC DTSDDVLLDLPFADPLAVALTASRRNGLTPAQFEALLDRRSKGTRADAVAALFSDTAPPR CCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC GAADAHEPRVRYFGHACVLVQTGSENLLFDPLISYPFPGQSPRFTFDDLPDVIDYVVITH CCCCCCCCCCEEECEEEEEEEECCCCEEECHHHCCCCCCCCCCCCHHHHHHHHHEEEEEC SHHDHFVLETLLQIRDRVKTIVVPQNTHGQLMDPSLKHTAHALGFENVIMMSEFDTLELG CCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEC GGKLHAVPFLGEHGDLDIRSKLGFLVEAGDRRVLMVADSNNLDDRLYEHVRRRYGKVDLL CCEEEEEEEECCCCCEEHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEE FIGMECEGAPVSWLYGPMLDTKLARSMDDSRRLNGSGSSAGLRLAEIVGADRVFIYAMAQ EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEHHHHHCCCEEEEEEECC EPWLTFISSLEYDESSFAMREARKMIAACGQAGIDACLLNGCVDIALGAR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSQYFLKKNVKIEPLVNRWHANPWLVYPPTAAYLMRHHLEIMTSFVKHAALHEKAAASR CCCCEECCCCEECHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC KIRGGPFVQGLNAQDVPAMEALIETTRRDGAHLFGLADDLDALGATLGAADGHSLVPFYE CCCCCCCEECCCCCCCHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHCCCCCCCCCCHHH QVPPRLRGMVELAYQAGNRAYARLMEGLYYDAYDTSALQSFALAPLWDDSRPFCLSTPRL HCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCEEEECCCC DTSDDVLLDLPFADPLAVALTASRRNGLTPAQFEALLDRRSKGTRADAVAALFSDTAPPR CCCCCEEEECCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCC GAADAHEPRVRYFGHACVLVQTGSENLLFDPLISYPFPGQSPRFTFDDLPDVIDYVVITH CCCCCCCCCCEEECEEEEEEEECCCCEEECHHHCCCCCCCCCCCCHHHHHHHHHEEEEEC SHHDHFVLETLLQIRDRVKTIVVPQNTHGQLMDPSLKHTAHALGFENVIMMSEFDTLELG CCCCHHHHHHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEEEEC GGKLHAVPFLGEHGDLDIRSKLGFLVEAGDRRVLMVADSNNLDDRLYEHVRRRYGKVDLL CCEEEEEEEECCCCCEEHHHHCCEEEECCCCEEEEEECCCCCHHHHHHHHHHHHCCEEEE FIGMECEGAPVSWLYGPMLDTKLARSMDDSRRLNGSGSSAGLRLAEIVGADRVFIYAMAQ EEEEECCCCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEHHHHHCCCEEEEEEECC EPWLTFISSLEYDESSFAMREARKMIAACGQAGIDACLLNGCVDIALGAR CHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA