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The map label for this gene is ydeP [H]

Identifier: 53721992

GI number: 53721992

Start: 1281070

End: 1283394

Strand: Reverse

Name: ydeP [H]

Synonym: BPSS0969

Alternate gene names: 53721992

Gene position: 1283394-1281070 (Counterclockwise)

Preceding gene: 53721995

Following gene: 53721991

Centisome position: 40.45

GC content: 69.08

Gene sequence:

>2325_bases
ATGAAAACCAAGGAACCCGACGCGCGCATCGAGCCGTACGCCCATCCGGCGGGCGGCTGGGGCGCGCTCAAGTACGTCGC
GATCAACCTGTTCAAGGAAAAGGTGCCGGGCGGCAATTACCGCGCGCTGCTGCGCCAGAACCAGCCGGACGGCTTCGACT
GCCCGGGCTGCGCGTGGCCCGATCGCGAGCATGCCTCGACGTTCGAATTCTGCGAGAACGGCGTGAAGGCCGTCGCGGCC
GAGGCGACCGCCAAGCGCGTGACGCCCGCGTTCTTCGCCGAGCATACGGTGAGCGCGCTCTTCGATCAGTCCGACTACGC
GCTCGAGCAGCACGGCCGCCTGACCGACCCGATGGTCTACGACGCCGCGACCGACCGCTACGTGCCGATCGCCTGGAACG
CGGCGTTCGAGCTGATCGCGAACCACCTGCGCGCGCTCGGCGAGCCGAACCGCGCGGCGTTCTACACGTCGGGCCGCGCG
AGCAACGAGGCCGCGTTCCTGTATCAGTTGCTCGTGCGCTACTACGGCACCAACAACTTCCCCGACTGCTCGAACATGTG
CCACGAGGCGACGAGCCGCGGGCTGCCGGCCACGGTCGGCGTCGGCAAGGGCACGGTCACGCTCGATGATTTCGAGCAGG
CCGACACGCTGCTGATCTTCGGCCAGAACCCGGCGACGAACCATCCGCGCATGATGGGCGAGCTGCGCGCGTGCGCGAAG
CGCGGCGCGACGATCGTGTCGATCAATCCGCTGAAGGAGCGCGGGCTCGAGCGCTTCGCGAGCCCGCAGCATCCGGTCGA
GATGCTGACGATGTCGAGCACGCCGATCGCGTCGACGTTCGTGCAGCCTCGCGTCGGCGGCGATCTCGCGCTCATCAAGG
GCGTCGCCAAGCGCGTGCTCGAGCTCGACGACGCGGCGCGCGAACGCGGCGGCGCGCGCGTGCTCGACGTCGACTTCATC
GCCGCGCACACGGCCGGCTTCGACACGTTCGCGGCCGACCTGCGCGCGCAGGACTGGGCCGCGCTCGTCGGCGAAAGCGG
CGTGCCGCGCGAGCAGATCGATGCGCTCGCGCGCATCTACGTGCGCGGCGAACGCGTGATCGCGACGTGGGGAATGGGCC
TCACGCAGCACAAGCACTCGGTCGCGACGGTGCACATGCTGTCGAACCTGATGCTGATGCGCGGCAACATCGGCCGCCCG
GGCGCGGGCCTCTGCCCCGTGCGCGGGCATTCGAACGTGCAGGGCAACCGCACGGTCGGCATCGAGGAGAAGCCTTCCGA
CGCGTTCCTCGAGCGGCTCGGCCGCGTGTTCGATTTCGCGCCGCCGCGCAGCCACGGCTACGACGTCGTCGAGACGATCG
AGGCGATGCTCGACGGCCGCATCGGCGTGTTCATCGGCCTCGGCGGCAACTTCGCGATGGCGACGCCCGATACGCCGCGC
ACGTGGCAAGGGCTGCGCCGTTGCGGCCTGACCGTGCACATCACGACGAAGCTCAACCGCAGCCATCTCGTGCATGGCCG
TGAGGCGCTGATCCTGCCGACGCTCGGCCGCACCGAGATCGATCTGCAGAACGGCATCGCGCAGGGCGTGAGCGTCGAGG
ACTCGATGTGCATGGTCCATGCGTCGTACGGGATGAACCCGCCGGCGTCGCCGAACCTGCTGTCGGAGGTCGCGATCGTC
GCGCGGCTCGGGCACGCGCTCTTCGGCGGCGACAAGATCGACTGGCTCGGCTATATGAACGACTACGCGAAGATCCGCGA
CGCGATCGAAGCGAGCATCGAGGGTTTCGACGACTACAACGCGCGAATCGCGCGGCCGGGCGGCTTCCATCTGCGGGTCG
CGTCGCGCGAGCGCGAATGGCTCACGCCGAGCGGCCGCGCGAACTTCATCGTCCATGCGCTGCCCGCCGACACGCCGATC
CAGCGCGCCCGCGCGCGCCACGGCAAGCGGCTGATGACGCTGATGACGACGCGCTCGCACGATCAGTACAACACGACGAT
CTACGCGCTCGACGACCGCTATCGCGGCGTGTTCGGCGAGCGGCGCGTCGTGTTCGCGCATCCCGACGATCTCGCGATGC
TCGGCTTCGAGGCGGGCGAGCGCGTGGATCTCGAAACGGTATGGGACGACGGAATCGAGCGGCGCGTCGCGGGCTTTCTG
CTCGTCGCGTACGACATTCCGCGCGGCTGCCTCGGCGCGTACTACCCGGAGACGAATCCGCTCGTGCCGCTCGACAGCGT
GGGCGACGTCTGCAACACGCCGACGTCGAAGTCGATTCCGGTGCTGATGCACCGGTCGGCGGGCGACGCGGCGCACGCGG
CATGA

Upstream 100 bases:

>100_bases
TCTTTTTCTTTCCGGCAAGGTGTGCTCCCGCCCGGTCTCGCCGCGCGCGTACGCTTCGTTGCGTCGCCGTCCCCAACCGG
CGCTCAGACATTTCAACGAC

Downstream 100 bases:

>100_bases
CGCGAGGCCCGCATGATCGTCAGACCGCGCGAGCACGGGTTCCGGATGCTGTTCGTCTGGAACGGTTCGGTGCTCAAATC
GATTCTGCCGCAGCTTGCGC

Product: molybdopterin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 774; Mature: 774

Protein sequence:

>774_residues
MKTKEPDARIEPYAHPAGGWGALKYVAINLFKEKVPGGNYRALLRQNQPDGFDCPGCAWPDREHASTFEFCENGVKAVAA
EATAKRVTPAFFAEHTVSALFDQSDYALEQHGRLTDPMVYDAATDRYVPIAWNAAFELIANHLRALGEPNRAAFYTSGRA
SNEAAFLYQLLVRYYGTNNFPDCSNMCHEATSRGLPATVGVGKGTVTLDDFEQADTLLIFGQNPATNHPRMMGELRACAK
RGATIVSINPLKERGLERFASPQHPVEMLTMSSTPIASTFVQPRVGGDLALIKGVAKRVLELDDAARERGGARVLDVDFI
AAHTAGFDTFAADLRAQDWAALVGESGVPREQIDALARIYVRGERVIATWGMGLTQHKHSVATVHMLSNLMLMRGNIGRP
GAGLCPVRGHSNVQGNRTVGIEEKPSDAFLERLGRVFDFAPPRSHGYDVVETIEAMLDGRIGVFIGLGGNFAMATPDTPR
TWQGLRRCGLTVHITTKLNRSHLVHGREALILPTLGRTEIDLQNGIAQGVSVEDSMCMVHASYGMNPPASPNLLSEVAIV
ARLGHALFGGDKIDWLGYMNDYAKIRDAIEASIEGFDDYNARIARPGGFHLRVASREREWLTPSGRANFIVHALPADTPI
QRARARHGKRLMTLMTTRSHDQYNTTIYALDDRYRGVFGERRVVFAHPDDLAMLGFEAGERVDLETVWDDGIERRVAGFL
LVAYDIPRGCLGAYYPETNPLVPLDSVGDVCNTPTSKSIPVLMHRSAGDAAHAA

Sequences:

>Translated_774_residues
MKTKEPDARIEPYAHPAGGWGALKYVAINLFKEKVPGGNYRALLRQNQPDGFDCPGCAWPDREHASTFEFCENGVKAVAA
EATAKRVTPAFFAEHTVSALFDQSDYALEQHGRLTDPMVYDAATDRYVPIAWNAAFELIANHLRALGEPNRAAFYTSGRA
SNEAAFLYQLLVRYYGTNNFPDCSNMCHEATSRGLPATVGVGKGTVTLDDFEQADTLLIFGQNPATNHPRMMGELRACAK
RGATIVSINPLKERGLERFASPQHPVEMLTMSSTPIASTFVQPRVGGDLALIKGVAKRVLELDDAARERGGARVLDVDFI
AAHTAGFDTFAADLRAQDWAALVGESGVPREQIDALARIYVRGERVIATWGMGLTQHKHSVATVHMLSNLMLMRGNIGRP
GAGLCPVRGHSNVQGNRTVGIEEKPSDAFLERLGRVFDFAPPRSHGYDVVETIEAMLDGRIGVFIGLGGNFAMATPDTPR
TWQGLRRCGLTVHITTKLNRSHLVHGREALILPTLGRTEIDLQNGIAQGVSVEDSMCMVHASYGMNPPASPNLLSEVAIV
ARLGHALFGGDKIDWLGYMNDYAKIRDAIEASIEGFDDYNARIARPGGFHLRVASREREWLTPSGRANFIVHALPADTPI
QRARARHGKRLMTLMTTRSHDQYNTTIYALDDRYRGVFGERRVVFAHPDDLAMLGFEAGERVDLETVWDDGIERRVAGFL
LVAYDIPRGCLGAYYPETNPLVPLDSVGDVCNTPTSKSIPVLMHRSAGDAAHAA
>Mature_774_residues
MKTKEPDARIEPYAHPAGGWGALKYVAINLFKEKVPGGNYRALLRQNQPDGFDCPGCAWPDREHASTFEFCENGVKAVAA
EATAKRVTPAFFAEHTVSALFDQSDYALEQHGRLTDPMVYDAATDRYVPIAWNAAFELIANHLRALGEPNRAAFYTSGRA
SNEAAFLYQLLVRYYGTNNFPDCSNMCHEATSRGLPATVGVGKGTVTLDDFEQADTLLIFGQNPATNHPRMMGELRACAK
RGATIVSINPLKERGLERFASPQHPVEMLTMSSTPIASTFVQPRVGGDLALIKGVAKRVLELDDAARERGGARVLDVDFI
AAHTAGFDTFAADLRAQDWAALVGESGVPREQIDALARIYVRGERVIATWGMGLTQHKHSVATVHMLSNLMLMRGNIGRP
GAGLCPVRGHSNVQGNRTVGIEEKPSDAFLERLGRVFDFAPPRSHGYDVVETIEAMLDGRIGVFIGLGGNFAMATPDTPR
TWQGLRRCGLTVHITTKLNRSHLVHGREALILPTLGRTEIDLQNGIAQGVSVEDSMCMVHASYGMNPPASPNLLSEVAIV
ARLGHALFGGDKIDWLGYMNDYAKIRDAIEASIEGFDDYNARIARPGGFHLRVASREREWLTPSGRANFIVHALPADTPI
QRARARHGKRLMTLMTTRSHDQYNTTIYALDDRYRGVFGERRVVFAHPDDLAMLGFEAGERVDLETVWDDGIERRVAGFL
LVAYDIPRGCLGAYYPETNPLVPLDSVGDVCNTPTSKSIPVLMHRSAGDAAHAA

Specific function: Probably involved in acid resistance [H]

COG id: COG0243

COG function: function code C; Anaerobic dehydrogenases, typically selenocysteine-containing

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic molybdopterin-containing oxidoreductase family [H]

Homologues:

Organism=Escherichia coli, GI1787778, Length=760, Percent_Identity=50, Blast_Score=755, Evalue=0.0,
Organism=Escherichia coli, GI3868721, Length=313, Percent_Identity=27.4760383386581, Blast_Score=135, Evalue=1e-32,
Organism=Escherichia coli, GI1788534, Length=405, Percent_Identity=24.6913580246914, Blast_Score=98, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR006657
- InterPro:   IPR006656
- InterPro:   IPR010046 [H]

Pfam domain/function: PF00384 Molybdopterin; PF01568 Molydop_binding [H]

EC number: NA

Molecular weight: Translated: 84741; Mature: 84741

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTKEPDARIEPYAHPAGGWGALKYVAINLFKEKVPGGNYRALLRQNQPDGFDCPGCAWP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEECCCCCCCCCCCCCCC
DREHASTFEFCENGVKAVAAEATAKRVTPAFFAEHTVSALFDQSDYALEQHGRLTDPMVY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEE
DAATDRYVPIAWNAAFELIANHLRALGEPNRAAFYTSGRASNEAAFLYQLLVRYYGTNNF
ECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEATSRGLPATVGVGKGTVTLDDFEQADTLLIFGQNPATNHPRMMGELRACAK
CCHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RGATIVSINPLKERGLERFASPQHPVEMLTMSSTPIASTFVQPRVGGDLALIKGVAKRVL
CCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHH
ELDDAARERGGARVLDVDFIAAHTAGFDTFAADLRAQDWAALVGESGVPREQIDALARIY
HHHHHHHHCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VRGERVIATWGMGLTQHKHSVATVHMLSNLMLMRGNIGRPGAGLCPVRGHSNVQGNRTVG
HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEC
IEEKPSDAFLERLGRVFDFAPPRSHGYDVVETIEAMLDGRIGVFIGLGGNFAMATPDTPR
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCH
TWQGLRRCGLTVHITTKLNRSHLVHGREALILPTLGRTEIDLQNGIAQGVSVEDSMCMVH
HHHHHHHCCCEEEEEEECCCHHCCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEEE
ASYGMNPPASPNLLSEVAIVARLGHALFGGDKIDWLGYMNDYAKIRDAIEASIEGFDDYN
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC
ARIARPGGFHLRVASREREWLTPSGRANFIVHALPADTPIQRARARHGKRLMTLMTTRSH
CEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEHECCCC
DQYNTTIYALDDRYRGVFGERRVVFAHPDDLAMLGFEAGERVDLETVWDDGIERRVAGFL
CCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEHHHHCCHHHHHHHHEE
LVAYDIPRGCLGAYYPETNPLVPLDSVGDVCNTPTSKSIPVLMHRSAGDAAHAA
EEEEECCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC
>Mature Secondary Structure
MKTKEPDARIEPYAHPAGGWGALKYVAINLFKEKVPGGNYRALLRQNQPDGFDCPGCAWP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEHEECCCCCCCCCCCCCCC
DREHASTFEFCENGVKAVAAEATAKRVTPAFFAEHTVSALFDQSDYALEQHGRLTDPMVY
CCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEE
DAATDRYVPIAWNAAFELIANHLRALGEPNRAAFYTSGRASNEAAFLYQLLVRYYGTNNF
ECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCC
PDCSNMCHEATSRGLPATVGVGKGTVTLDDFEQADTLLIFGQNPATNHPRMMGELRACAK
CCHHHHHHHHHHCCCCEEEECCCCEEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
RGATIVSINPLKERGLERFASPQHPVEMLTMSSTPIASTFVQPRVGGDLALIKGVAKRVL
CCCEEEEECCHHHHHHHHHCCCCCCEEEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHH
ELDDAARERGGARVLDVDFIAAHTAGFDTFAADLRAQDWAALVGESGVPREQIDALARIY
HHHHHHHHCCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VRGERVIATWGMGLTQHKHSVATVHMLSNLMLMRGNIGRPGAGLCPVRGHSNVQGNRTVG
HCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEC
IEEKPSDAFLERLGRVFDFAPPRSHGYDVVETIEAMLDGRIGVFIGLGGNFAMATPDTPR
CCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCEEECCCCCCH
TWQGLRRCGLTVHITTKLNRSHLVHGREALILPTLGRTEIDLQNGIAQGVSVEDSMCMVH
HHHHHHHCCCEEEEEEECCCHHCCCCCCEEEEECCCCCEEEHHHHHHCCCCCCCCEEEEE
ASYGMNPPASPNLLSEVAIVARLGHALFGGDKIDWLGYMNDYAKIRDAIEASIEGFDDYN
ECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCC
ARIARPGGFHLRVASREREWLTPSGRANFIVHALPADTPIQRARARHGKRLMTLMTTRSH
CEEECCCCEEEEEECCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEHECCCC
DQYNTTIYALDDRYRGVFGERRVVFAHPDDLAMLGFEAGERVDLETVWDDGIERRVAGFL
CCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEEECCCCCEEEEHHHHCCHHHHHHHHEE
LVAYDIPRGCLGAYYPETNPLVPLDSVGDVCNTPTSKSIPVLMHRSAGDAAHAA
EEEEECCCHHHHCCCCCCCCCCCCCCCCHHHCCCCCCCCCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]