| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721948
Identifier: 53721948
GI number: 53721948
Start: 1219535
End: 1220449
Strand: Reverse
Name: 53721948
Synonym: BPSS0924
Alternate gene names: NA
Gene position: 1220449-1219535 (Counterclockwise)
Preceding gene: 53721949
Following gene: 53721947
Centisome position: 38.46
GC content: 63.83
Gene sequence:
>915_bases ATGACGACACCGCATATGATGCCCGTGCGGCGCGACATCCGCTTCGCGCTGCCCGCCGATCGCGCGCACGACTGGCACGT CCAGGGCGCGCCCGTCACCCATTTCATGAACGCGCTGTCGCTGCTGTTTCCGGCGGGCGAGCGCTTCTTCATGGATTCGG TGCGCAACTACCGCGACGAGATCCACGATCCCGAGCTGAAGAAGCAAGTGGCGGGCTTCATCGGCCAGGAAGCGATGCAC ACGCGCGAGCACATCGAGTACAACGACCTGCTGCAATCGGCGGGCCTGCCCGCGCACAAGCTCGACAAGCGCCTGTGGGC GCTGCTCGGCTGGGGCAAGAAGGTGCTGCCGAATTCGGTGCAGCTCGCGATCACGATCGCGCTCGAGCATTACACGGCAA TCCTCGCGAACCAGTTGCTCTCGGGCTACACGCACCGGATCGACGGCTCGGTCGAAGGCTACAAGCAGATGTGGCTGTGG CACGCGATGGAAGAGACCGAGCACAAGGCCGTCTCGTACGACGTATGGAACACCGTGATGAAGCCGGGCGTGAAGACCTA CCTGCTGCGCACCGGCACGATGCTCGCGACGACGCTGATCTTCTGGGCCGTCGTGTTCGATTTCCACGTGCGCCTGATGT TCGCGCACCGGATGCGACACGGGAAGCTGAAGGGCATGTGGCGGCTCGTCAAGTATCTGTATAGCCCGAAGAACGGCGTG TTCCCGAGCATCGCGCTCGAATGGCTCGACTATTTCCGGCCGGGCTTCCATCCGTGGGACCACGACAATCGCGTGTACCT GCAGGGCCTCGACACGTTGCTCGCGAACATCGACGCCGCGAACGAGCGCTATGCCGACCAGGTCGCGCCACGGCGCGTGC CGTTGCATTCGTTGCCCGAGCACCAGCACGCGTAA
Upstream 100 bases:
>100_bases CGAAGCTTCAGAGCGCACGGGCGCGGCGCCGCGCGGGCCGCGCGACGCCGGCGCCCGCGCATGCGACGTACAACAACGCT GGCAACCAGGGAGAGCAATC
Downstream 100 bases:
>100_bases GCGAACGAGCGATGGCGACCGTCCGCGACACGCTGACGGTCCGCTCGGGCGACGTGCGTCTCGCCGTCTACCTGAGCGGG CCGCGCAACGCCCCGCCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Metal-Dependent Hydrolase-Like Protein; FF Domain-Containing Protein; FF Domain Protein; Conserved Protein UCP; Metal-Dependent Hydrolase-Like; Phthalate 4 5-Dioxygenase; Metal Hydrolase
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MTTPHMMPVRRDIRFALPADRAHDWHVQGAPVTHFMNALSLLFPAGERFFMDSVRNYRDEIHDPELKKQVAGFIGQEAMH TREHIEYNDLLQSAGLPAHKLDKRLWALLGWGKKVLPNSVQLAITIALEHYTAILANQLLSGYTHRIDGSVEGYKQMWLW HAMEETEHKAVSYDVWNTVMKPGVKTYLLRTGTMLATTLIFWAVVFDFHVRLMFAHRMRHGKLKGMWRLVKYLYSPKNGV FPSIALEWLDYFRPGFHPWDHDNRVYLQGLDTLLANIDAANERYADQVAPRRVPLHSLPEHQHA
Sequences:
>Translated_304_residues MTTPHMMPVRRDIRFALPADRAHDWHVQGAPVTHFMNALSLLFPAGERFFMDSVRNYRDEIHDPELKKQVAGFIGQEAMH TREHIEYNDLLQSAGLPAHKLDKRLWALLGWGKKVLPNSVQLAITIALEHYTAILANQLLSGYTHRIDGSVEGYKQMWLW HAMEETEHKAVSYDVWNTVMKPGVKTYLLRTGTMLATTLIFWAVVFDFHVRLMFAHRMRHGKLKGMWRLVKYLYSPKNGV FPSIALEWLDYFRPGFHPWDHDNRVYLQGLDTLLANIDAANERYADQVAPRRVPLHSLPEHQHA >Mature_303_residues TTPHMMPVRRDIRFALPADRAHDWHVQGAPVTHFMNALSLLFPAGERFFMDSVRNYRDEIHDPELKKQVAGFIGQEAMHT REHIEYNDLLQSAGLPAHKLDKRLWALLGWGKKVLPNSVQLAITIALEHYTAILANQLLSGYTHRIDGSVEGYKQMWLWH AMEETEHKAVSYDVWNTVMKPGVKTYLLRTGTMLATTLIFWAVVFDFHVRLMFAHRMRHGKLKGMWRLVKYLYSPKNGVF PSIALEWLDYFRPGFHPWDHDNRVYLQGLDTLLANIDAANERYADQVAPRRVPLHSLPEHQHA
Specific function: Unknown
COG id: COG3687
COG function: function code R; Predicted metal-dependent hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35323; Mature: 35192
Theoretical pI: Translated: 9.32; Mature: 9.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPHMMPVRRDIRFALPADRAHDWHVQGAPVTHFMNALSLLFPAGERFFMDSVRNYRDE CCCCCCCCHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHDPELKKQVAGFIGQEAMHTREHIEYNDLLQSAGLPAHKLDKRLWALLGWGKKVLPNSV CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCE QLAITIALEHYTAILANQLLSGYTHRIDGSVEGYKQMWLWHAMEETEHKAVSYDVWNTVM EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPGVKTYLLRTGTMLATTLIFWAVVFDFHVRLMFAHRMRHGKLKGMWRLVKYLYSPKNGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC FPSIALEWLDYFRPGFHPWDHDNRVYLQGLDTLLANIDAANERYADQVAPRRVPLHSLPE CHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC HQHA CCCC >Mature Secondary Structure TTPHMMPVRRDIRFALPADRAHDWHVQGAPVTHFMNALSLLFPAGERFFMDSVRNYRDE CCCCCCCHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHH IHDPELKKQVAGFIGQEAMHTREHIEYNDLLQSAGLPAHKLDKRLWALLGWGKKVLPNSV CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHCCCCE QLAITIALEHYTAILANQLLSGYTHRIDGSVEGYKQMWLWHAMEETEHKAVSYDVWNTVM EEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KPGVKTYLLRTGTMLATTLIFWAVVFDFHVRLMFAHRMRHGKLKGMWRLVKYLYSPKNGV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC FPSIALEWLDYFRPGFHPWDHDNRVYLQGLDTLLANIDAANERYADQVAPRRVPLHSLPE CHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCC HQHA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA