| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721858
Identifier: 53721858
GI number: 53721858
Start: 1119990
End: 1120478
Strand: Reverse
Name: 53721858
Synonym: BPSS0832
Alternate gene names: NA
Gene position: 1120478-1119990 (Counterclockwise)
Preceding gene: 53721861
Following gene: 53721856
Centisome position: 35.31
GC content: 69.94
Gene sequence:
>489_bases GTGCCTCGCGCGCATCGAACGATGGGGCGAGCCATGACATTGAAAGCGAATCTCGAAGGCGTGCGCGACACCTATCGCCT CTGCTTCGTACGCAATCCGTGGGCCTACTTCACCTGCCTGCCGCTCGATCGCCAGTGCGGCGACCGCTGGAGCGAGGCGC CTTACGAACTGTACGCCGGCGCGCCCTACGGCGACAGCCCGGAGCAGATCCTGCGCGTCGCGTTCGACGGCCCGCTGCTG CCGCCCGAGGCCGGCCGCGGCGGGCTCACGTGCAGCGTCGTCGACATCAACGAAGGCCGCGCGCCGTGGCTTCGAACCGA AAGCTACTTCGGCGGCGAGCCGCTCGCGATCGCCGCCGGCGCGACGCTCGGCGCGTTTGTCGAAACGGTCGAAAAAGCGG GCGGCACGGTGTTCGTACCGCTCACGTGGGGCGCGCTGCCGGACGCCGGGAAGCGCGCGCACGCGATGGCGGCAACCGCC ACGAACTGA
Upstream 100 bases:
>100_bases TCAACCGGGCGCGCGCGGCGCGCGGTTGATCTGCGTCAACGCACCGGCGGGCGGCGCGACCATGATCGTTTCGTCGCGTG CGCCGCCGTGCCCTCCGTGC
Downstream 100 bases:
>100_bases CCGACAGGCGGGCCGCGTATGCGGCTCCGTTGCCCGTCGCACGTTGTCCGTCGCCGGCCGCGCATCACAGCTCGCCTGTC GCACGCCGCCACGATGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPRAHRTMGRAMTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAGAPYGDSPEQILRVAFDGPLL PPEAGRGGLTCSVVDINEGRAPWLRTESYFGGEPLAIAAGATLGAFVETVEKAGGTVFVPLTWGALPDAGKRAHAMAATA TN
Sequences:
>Translated_162_residues MPRAHRTMGRAMTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAGAPYGDSPEQILRVAFDGPLL PPEAGRGGLTCSVVDINEGRAPWLRTESYFGGEPLAIAAGATLGAFVETVEKAGGTVFVPLTWGALPDAGKRAHAMAATA TN >Mature_161_residues PRAHRTMGRAMTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAGAPYGDSPEQILRVAFDGPLLP PEAGRGGLTCSVVDINEGRAPWLRTESYFGGEPLAIAAGATLGAFVETVEKAGGTVFVPLTWGALPDAGKRAHAMAATAT N
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17476; Mature: 17345
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRAHRTMGRAMTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAG CCCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCHHHCCCCCCCCEEEEEC APYGDSPEQILRVAFDGPLLPPEAGRGGLTCSVVDINEGRAPWLRTESYFGGEPLAIAAG CCCCCCHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEECC ATLGAFVETVEKAGGTVFVPLTWGALPDAGKRAHAMAATATN CHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCC >Mature Secondary Structure PRAHRTMGRAMTLKANLEGVRDTYRLCFVRNPWAYFTCLPLDRQCGDRWSEAPYELYAG CCCCCCCCCEEEEEECCCCCCCEEEEEEEECCCEEEEEEECCHHHCCCCCCCCEEEEEC APYGDSPEQILRVAFDGPLLPPEAGRGGLTCSVVDINEGRAPWLRTESYFGGEPLAIAAG CCCCCCHHHHEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCCCCCCEEEECC ATLGAFVETVEKAGGTVFVPLTWGALPDAGKRAHAMAATATN CHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA