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The map label for this gene is xynB [H]

Identifier: 53721795

GI number: 53721795

Start: 1030401

End: 1031381

Strand: Reverse

Name: xynB [H]

Synonym: BPSS0769

Alternate gene names: 53721795

Gene position: 1031381-1030401 (Counterclockwise)

Preceding gene: 53721796

Following gene: 53721794

Centisome position: 32.5

GC content: 75.03

Gene sequence:

>981_bases
ATGGACATCACCCGACGCAGCCTGCTCGGCGCCGCGCTCGCCGGCGCGCTCGACACGATCGCGCCGGCCGCGCACGCGCA
GGCCGCCGCGCGCGGCGCGGCGCCCCCGGACGACGCGCCGCGCGCCGTTCCCGACGAAACGATTCCGCTGTGGCCGGGCC
CCGCGCCCGACCCGGCTCCGACGGGCGCGGGTGACGGCGAGCGGATCGGCAGGCGCGGCAGCGTCTCGCGCGTCGCGCGG
CCGCGGCTGAACGTCTACCGGCCGGTGCACGGCAACGGCGGCGCGGCGCTCGTGATCGCGGGCGGCGGCTACGACCACAT
CGAGCTCGGTAACGAGAGCGCGCCGATGTGCGCATGGCTCACGTCGCTCGGCGTGATGGCGTTCGAGCTCGTGTACCGGC
TGCCCGAGCAAGGCTGGTCGCGGCTCGCGCCGCTGCAGGACGGCCAGCGCGCGATGCGCTTGATCCGCGCGCGCGCGAAG
CGCGACGGCGTCGATCCCGCGCGCATCGCGATCATCGGTTTTTCCGCGGGCGGTCATCTCGCCGGGATGACGGCCGTCGA
GCCCGACGCGCGGCGCTATGCGAGCGTCGACGATGCCGATCGCGAATCCGCGCGCCCCGATCTCGCCGCCCTGCTCTATC
CGGTGCTCACGCTGATGCCGCCGTTCGATCGCACGCGCACGCGGCTGCACGTCGCCGGCGCGCATCCGGCGCAGGCCGAC
AGCGAGGCGCTGTCGGCGAACCTGCGCGTGAGCGCGCGCACGCCGCCGACGTTTCTCGCGCATGCGTTCGACGATCCGAT
CGCGCCGATCGACAACAGCCTGCTGATGGCGAGCGCGCTGCGCGCGGCGCGGGTGAGCGTCGAGCTGCACGCGTTCCAGG
CAGGCGGCCACGGCTGGGGAATGGGCAAGCCCGGCAGCGCCGTGCACGCATGGCCCGCGCTCTTCGAGCAGTGGGCGCGG
CTGAACCGGCTGCTGCCGTGA

Upstream 100 bases:

>100_bases
GCCGCGCGACGCGACGTCCGGCGCATACGCGCGCCCATTCACCGACGACCGGCATCGCGAAAGCGGCGACGTCTTCCGAT
TTCAATCCGGAGCCTTCGAC

Downstream 100 bases:

>100_bases
TGCGATCGCGAGCGGCGCGCCATGCCCCGCTCGCGCGCGCCCTCGAACGCGAGGCCGCACGGCCACACGCTGATCGATCA
AGCGTCGGTCGTGCGCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylanase B; 1,4-beta-D-xylan xylanohydrolase B [H]

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MDITRRSLLGAALAGALDTIAPAAHAQAAARGAAPPDDAPRAVPDETIPLWPGPAPDPAPTGAGDGERIGRRGSVSRVAR
PRLNVYRPVHGNGGAALVIAGGGYDHIELGNESAPMCAWLTSLGVMAFELVYRLPEQGWSRLAPLQDGQRAMRLIRARAK
RDGVDPARIAIIGFSAGGHLAGMTAVEPDARRYASVDDADRESARPDLAALLYPVLTLMPPFDRTRTRLHVAGAHPAQAD
SEALSANLRVSARTPPTFLAHAFDDPIAPIDNSLLMASALRAARVSVELHAFQAGGHGWGMGKPGSAVHAWPALFEQWAR
LNRLLP

Sequences:

>Translated_326_residues
MDITRRSLLGAALAGALDTIAPAAHAQAAARGAAPPDDAPRAVPDETIPLWPGPAPDPAPTGAGDGERIGRRGSVSRVAR
PRLNVYRPVHGNGGAALVIAGGGYDHIELGNESAPMCAWLTSLGVMAFELVYRLPEQGWSRLAPLQDGQRAMRLIRARAK
RDGVDPARIAIIGFSAGGHLAGMTAVEPDARRYASVDDADRESARPDLAALLYPVLTLMPPFDRTRTRLHVAGAHPAQAD
SEALSANLRVSARTPPTFLAHAFDDPIAPIDNSLLMASALRAARVSVELHAFQAGGHGWGMGKPGSAVHAWPALFEQWAR
LNRLLP
>Mature_326_residues
MDITRRSLLGAALAGALDTIAPAAHAQAAARGAAPPDDAPRAVPDETIPLWPGPAPDPAPTGAGDGERIGRRGSVSRVAR
PRLNVYRPVHGNGGAALVIAGGGYDHIELGNESAPMCAWLTSLGVMAFELVYRLPEQGWSRLAPLQDGQRAMRLIRARAK
RDGVDPARIAIIGFSAGGHLAGMTAVEPDARRYASVDDADRESARPDLAALLYPVLTLMPPFDRTRTRLHVAGAHPAQAD
SEALSANLRVSARTPPTFLAHAFDDPIAPIDNSLLMASALRAARVSVELHAFQAGGHGWGMGKPGSAVHAWPALFEQWAR
LNRLLP

Specific function: B.fibrisolvens is located in the rumen of ruminant animals, where it contributes to the animal's digestion of plant material by hydrolyzing hemicellulose with its xylanases [H]

COG id: COG0657

COG function: function code I; Esterase/lipase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 10 (cellulase F) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013094
- InterPro:   IPR001000
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF07859 Abhydrolase_3; PF00331 Glyco_hydro_10 [H]

EC number: =3.2.1.8 [H]

Molecular weight: Translated: 34409; Mature: 34409

Theoretical pI: Translated: 9.08; Mature: 9.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDITRRSLLGAALAGALDTIAPAAHAQAAARGAAPPDDAPRAVPDETIPLWPGPAPDPAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGAGDGERIGRRGSVSRVARPRLNVYRPVHGNGGAALVIAGGGYDHIELGNESAPMCAWL
CCCCCHHHHCCCCCHHHHHCCCCCEECCEECCCCEEEEEECCCCCEEEECCCCCHHHHHH
TSLGVMAFELVYRLPEQGWSRLAPLQDGQRAMRLIRARAKRDGVDPARIAIIGFSAGGHL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
AGMTAVEPDARRYASVDDADRESARPDLAALLYPVLTLMPPFDRTRTRLHVAGAHPAQAD
CCCCCCCCHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
SEALSANLRVSARTPPTFLAHAFDDPIAPIDNSLLMASALRAARVSVELHAFQAGGHGWG
HHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCC
MGKPGSAVHAWPALFEQWARLNRLLP
CCCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDITRRSLLGAALAGALDTIAPAAHAQAAARGAAPPDDAPRAVPDETIPLWPGPAPDPAP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TGAGDGERIGRRGSVSRVARPRLNVYRPVHGNGGAALVIAGGGYDHIELGNESAPMCAWL
CCCCCHHHHCCCCCHHHHHCCCCCEECCEECCCCEEEEEECCCCCEEEECCCCCHHHHHH
TSLGVMAFELVYRLPEQGWSRLAPLQDGQRAMRLIRARAKRDGVDPARIAIIGFSAGGHL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC
AGMTAVEPDARRYASVDDADRESARPDLAALLYPVLTLMPPFDRTRTRLHVAGAHPAQAD
CCCCCCCCHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCC
SEALSANLRVSARTPPTFLAHAFDDPIAPIDNSLLMASALRAARVSVELHAFQAGGHGWG
HHHHHCCEEEECCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHEEEEEEEEECCCCCCC
MGKPGSAVHAWPALFEQWARLNRLLP
CCCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1909424 [H]