| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721763
Identifier: 53721763
GI number: 53721763
Start: 991009
End: 992559
Strand: Reverse
Name: 53721763
Synonym: BPSS0737
Alternate gene names: NA
Gene position: 992559-991009 (Counterclockwise)
Preceding gene: 53721765
Following gene: 53721762
Centisome position: 31.28
GC content: 72.21
Gene sequence:
>1551_bases ATGTCCGACCCGTCACGGGAGAATCCCCCGACCGACGCGCACGCTTCGTCGCTCGTCACGCACGACGAACCGGTGCCGCG CGGCCGCCGCGCGCCGCGTCCGCTCTGGACGCTCGTGCCGCGCGCCGCCGGCTACGGCGTCGTGTTCTTCGTCATCTGGA TGGTGCTGACCATCATGTTTCCGAACGTCTTCACGCGCTCGTCCGAGCGCGCGGTCGTCAACAACGAAGTGACGCTCGTC ACGTCGCCGGTCGAAGGCGTCGTGACCGAGCAGCACGTGACGGCCGGCAAGCCGTTCGACGCGAACCAGCCGCTCGCGAC CGTGCAGAACCCGAACGTCGATCGCGCGCTGCTGATCGACCTGACGGGCAAGAAGCTCGACAACCAGCAGCGCGAGGACG CGGCGCGCGCCGAGCTCGCGGGCGACGAGAGCCAGCTCGCGTCGACCGAGCACGATCTGCAGCGCTATCAGTCCGTGGCA CAGAAGGAGCACGCGGCGACCATCCGCGCGCTCGAGGCGCGGCTCGCGGTCGCGCGCGCGCAGGTGGACCAGCAGGAAGA CATCGTCAACCGCAATCAGGCGATGCAGTGGGCAGGCGCCGTGAGCGAGGCGTACACCAGCGCGTCGCGCTATCAGCTAT CGATCCTGTCGAACGCGAAAGCGGCCGCGGCCGCCGAGCTCGAGCACGCGGTCGCGAACGGCGACGCGTCGCGCAGCAAG GTCTACGCGTCCGCCACCGACGGGCCGGCCGCGTCGCTGTCGCAGCGCGGCCGGCTGCTCGGCGCGGACATCGCGCAGCG CAAGGCCGAGATCGCGCAGTTCGACGCTTACGGCCAGTCGGTCGACAAGCTGATCGCCGCCGAGCAGCAGCGGCTCGACA GGCTGAGCCGCATCGAGATCCGCTCGGGCGAGCCGGGCGTCGTGGAGGACGTGCTCGCCCCGCCCGGCACGCGCGTCGCC GCCGGCGCGACGCTGATCCGTGCGAGCAACTGCGCGCGCTCGCGTGTCGTCGCCGTGTTCCCGCGCAGCCTGAGCGACGA CCTGCTGCCCGGCACGCATCTGAACGTGCGGATGGACGGTGTGCCGGCCGTGCTGCCCGCGTCGATCGCCGAAGTGCTGC CGCGCGCGTCCGAAGGCGAGCAGGCGCGCTACTTCGTGCCCTTCCCGCCGATCGAGAAGAACGAGATCTATGTGATCGCG AAGCTCGACGAGCCGCTCGCGCCGCTGTCGCGCCGCGCGAGCGCCCGGCCGGACGCGCGCTGCGCGATGGGGCGCTGGGC GAGAGTCAGCCTCGATCGGGGCTGGCTCGCGAGCAACGTGTCCGGTCTCGCGAACGTCGATCCGAACTGGACCGCCGGCG CGCGTTCGGCGCTCGCGCGCGGCGGGCAATGGCTGCGCGACGCCGGCGTGCAAGCCCGGCGCCGGCTCGAGGACTTCGCG ACGAACGCCGCGCGCCGGCTCGGCGAGCTGGCCGCGGACGGGCGGCGCTGGCTGAACGAGCGGGCGAGCGCGGCCCGACG CTGGCTCGACGATCTGAAATCGGCGGCCTGA
Upstream 100 bases:
>100_bases GCCGTCGATCCCGTCGACGTCGACGCGCGCGGCACCGGGCCGCGCGTGCGCGCCTGTCTTTTGTCTCATCGTTCGCGCTT TTGCGATGCAGGAGGGCAAC
Downstream 100 bases:
>100_bases GCGCGCGCAGCCCCATGCCGATGAGATTTCACCTCGTCCGCCGCCTGGGCCGTGCGGCATCGTTCGCGATCGGGCCGATG GCCTCGCTGCTGTTCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 516; Mature: 515
Protein sequence:
>516_residues MSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVTLV TSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVA QKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSK VYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVVEDVLAPPGTRVA AGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIA KLDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRRLEDFA TNAARRLGELAADGRRWLNERASAARRWLDDLKSAA
Sequences:
>Translated_516_residues MSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVTLV TSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVA QKEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSK VYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVVEDVLAPPGTRVA AGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIA KLDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRRLEDFA TNAARRLGELAADGRRWLNERASAARRWLDDLKSAA >Mature_515_residues SDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMFPNVFTRSSERAVVNNEVTLVT SPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLIDLTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVAQ KEHAATIRALEARLAVARAQVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSKV YASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEIRSGEPGVVEDVLAPPGTRVAA GATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDGVPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIAK LDEPLAPLSRRASARPDARCAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRRLEDFAT NAARRLGELAADGRRWLNERASAARRWLDDLKSAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55946; Mature: 55815
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMF CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH PNVFTRSSERAVVNNEVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLID HHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEE LTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARLAVARA ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCE VYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEI EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE RSGEPGVVEDVLAPPGTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDG CCCCCCHHHHHHCCCCCCHHHCHHHEECCCCHHCCEEEEECCCCCCCCCCCCEEEEEECC VPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIAKLDEPLAPLSRRASARPDAR CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHH CAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRRLEDFA HHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TNAARRLGELAADGRRWLNERASAARRWLDDLKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SDPSRENPPTDAHASSLVTHDEPVPRGRRAPRPLWTLVPRAAGYGVVFFVIWMVLTIMF CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHH PNVFTRSSERAVVNNEVTLVTSPVEGVVTEQHVTAGKPFDANQPLATVQNPNVDRALLID HHHHCCCCCCEEECCCEEEEECCCCCHHHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEE LTGKKLDNQQREDAARAELAGDESQLASTEHDLQRYQSVAQKEHAATIRALEARLAVARA ECCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QVDQQEDIVNRNQAMQWAGAVSEAYTSASRYQLSILSNAKAAAAAELEHAVANGDASRSK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCCCCE VYASATDGPAASLSQRGRLLGADIAQRKAEIAQFDAYGQSVDKLIAAEQQRLDRLSRIEI EEEECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE RSGEPGVVEDVLAPPGTRVAAGATLIRASNCARSRVVAVFPRSLSDDLLPGTHLNVRMDG CCCCCCHHHHHHCCCCCCHHHCHHHEECCCCHHCCEEEEECCCCCCCCCCCCEEEEEECC VPAVLPASIAEVLPRASEGEQARYFVPFPPIEKNEIYVIAKLDEPLAPLSRRASARPDAR CCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCHH CAMGRWARVSLDRGWLASNVSGLANVDPNWTAGARSALARGGQWLRDAGVQARRRLEDFA HHHCCCEEEECCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHH TNAARRLGELAADGRRWLNERASAARRWLDDLKSAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA