Click here to switch to the map view.

The map label for this gene is ycbX [H]

Identifier: 53721736

GI number: 53721736

Start: 950344

End: 951213

Strand: Reverse

Name: ycbX [H]

Synonym: BPSS0707

Alternate gene names: 53721736

Gene position: 951213-950344 (Counterclockwise)

Preceding gene: 53721740

Following gene: 53721733

Centisome position: 29.98

GC content: 70.23

Gene sequence:

>870_bases
ATGCCAGTCATCAGCGAACTTTTCGTCTATCCGATCAAGTCCTGCGCGGGCATCGCGACGGTTCGCGCGCAATTGCTCGT
CACGGGCCTCGAATACGATCGCAACTGGATGGTCACCGATCCGACAGGCGCGATGCTCACGCAGCGCACGCACCCGCGAC
TCGCGCTCGTGCGCACGGCGATCGGCGAGCGCGAGCTCGTCGTCACCGCGGCAGGCATGCCCGAGTTGCGCACGCCGCTC
GCGGCGTCGGCGCTCGCGGGTGCCGAGCGGCTCGCCGCAACCGTCTGGCGCGACACCGTGAGCGCGCTCGACACCGGCGC
GCATGCGGCGCGCTGGTTCAGCGAGTTCCTCGGCGCGCCCGCGCGGCTCGCGCGCTTCGCGCCCGACGCGCGGCGCGTGG
TGGGCGCGAAGTGGACGGGCCCGTTCACGTCGTACGCGCAATTCGCGGACGGCTTTCCGCTCCTCGTCGTCGGCCAGTCG
TCGCTCGACGACCTGAACGTGCGGCTGCGCCGCAAGGGCGCGAGCGCGGTGCCGATGAACCGCTTCCGCCCGAACGTCGT
GCTGGTGGGCCTCGACGCATACGAGGAAGACTACGTCGACTACCTCGACGTGCAGACGGGCGGCGGCGGCGTGCGCCTGA
GCCTCGTCAAGCTGTGCACGCGTTGCCCGGTGCCGACGATCGACCAGCGCACGGGCGCGCCGGACCCGGCGTGGCCGAAC
GAGCCGACCGACACGATGAGCCTCTATCGCGGCAGCAAGCAGTTCGGCGGCGCGCTGACGTTCGGCAAGAATGCGATCGT
CTTGAACGGCGACGGCGCGTTCCTGGAAGTCGGGCAATCGGTCGATGCGGAGATCGCGTTCGGCGAGTGA

Upstream 100 bases:

>100_bases
GCGCTCGGTCGCAGGCGGTTGCGAACGTGGCCAATCTGGCAGAATCACGGTTCCGCCGCAGTTTTTTTAATCCGTACCGG
TCCCCGGGCCCGAGCGCGCC

Downstream 100 bases:

>100_bases
CTCGCGCCAATCGCGCGTGACGCGCGCGTATGTCCGACACACCGCTTGCGCCGCCACTCGCACCGCGCGACGCTGCCGTC
ATTGACACCCCGCCGCCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDPTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPL
AASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQS
SLDDLNVRLRRKGASAVPMNRFRPNVVLVGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE

Sequences:

>Translated_289_residues
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDPTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPL
AASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQS
SLDDLNVRLRRKGASAVPMNRFRPNVVLVGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
>Mature_288_residues
PVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDPTGAMLTQRTHPRLALVRTAIGERELVVTAAGMPELRTPLA
ASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAPARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSS
LDDLNVRLRRKGASAVPMNRFRPNVVLVGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPNE
PTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MOSC domain [H]

Homologues:

Organism=Homo sapiens, GI224600454, Length=294, Percent_Identity=31.2925170068027, Blast_Score=126, Evalue=2e-29,
Organism=Homo sapiens, GI31542713, Length=255, Percent_Identity=33.3333333333333, Blast_Score=125, Evalue=4e-29,
Organism=Homo sapiens, GI157388923, Length=250, Percent_Identity=30, Blast_Score=115, Evalue=5e-26,
Organism=Escherichia coli, GI1787179, Length=282, Percent_Identity=30.4964539007092, Blast_Score=115, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI25147498, Length=289, Percent_Identity=26.2975778546713, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17540702, Length=302, Percent_Identity=27.1523178807947, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71990971, Length=245, Percent_Identity=26.9387755102041, Blast_Score=75, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17561286, Length=300, Percent_Identity=24.3333333333333, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI17647607, Length=265, Percent_Identity=29.4339622641509, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR005302
- InterPro:   IPR005303
- InterPro:   IPR011037 [H]

Pfam domain/function: PF00111 Fer2; PF03473 MOSC; PF03476 MOSC_N [H]

EC number: NA

Molecular weight: Translated: 31086; Mature: 30955

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDPTGAMLTQRTHPRLALVRTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHCCCCCCHHHHHHHH
IGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAP
CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMN
HHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHEEEECCCCCCCHH
RFRPNVVLVGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
HCCCCEEEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
CCCHHHHHHCCCHHHCCEEEECCCEEEECCCCCEEEECCCCCCEEECCC
>Mature Secondary Structure 
PVISELFVYPIKSCAGIATVRAQLLVTGLEYDRNWMVTDPTGAMLTQRTHPRLALVRTA
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHCCCCCCHHHHHHHH
IGERELVVTAAGMPELRTPLAASALAGAERLAATVWRDTVSALDTGAHAARWFSEFLGAP
CCCCEEEEEECCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCH
ARLARFAPDARRVVGAKWTGPFTSYAQFADGFPLLVVGQSSLDDLNVRLRRKGASAVPMN
HHHHHCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHHEEEECCCCCCCHH
RFRPNVVLVGLDAYEEDYVDYLDVQTGGGGVRLSLVKLCTRCPVPTIDQRTGAPDPAWPN
HCCCCEEEEECCCCCCCCCEEEEEEECCCCEEHHHHHHHHHCCCCCCCCCCCCCCCCCCC
EPTDTMSLYRGSKQFGGALTFGKNAIVLNGDGAFLEVGQSVDAEIAFGE
CCCHHHHHHCCCHHHCCEEEECCCEEEECCCCCEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]