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The map label for this gene is hpcR [H]

Identifier: 53721720

GI number: 53721720

Start: 932953

End: 933390

Strand: Reverse

Name: hpcR [H]

Synonym: BPSS0691

Alternate gene names: 53721720

Gene position: 933390-932953 (Counterclockwise)

Preceding gene: 53721728

Following gene: 53721717

Centisome position: 29.42

GC content: 64.38

Gene sequence:

>438_bases
ATGAATCGTACGTTCGATCACCGCAATCTGGCCATGCTGTTGCTCGAGGCCCGCGAAACGTTGATGGGCCGGTTCCGGCC
GATCCTGAAGGAATTTGCGCTGACGGAGCAGCAATGGCGGATCATTCGCGTGCTGGACGGCGAACCGTCTCATGAGCTCG
AAGCCGGGCAGATCGCGAAGCGCTGCTGCATCCTGAGCCCGAGCCTCACGGGCGTGCTGGAGAGAATGGAGCGCGACGGC
CTGATTCGCCGCACGCGCGCGCAGGAGGACCAGCGCAGGCTGATCGTCAGCTTGACGCCGCAAAGTTGCCAGCTCGTCAC
GCAGATCAGCCCGCGCATCGACGAGCAGTATCGGCTCATCGAGCAGCGCTTCGGCGCGGATGCGCTCGGCGAGGTGTACG
CGGCGCTCGACAAACTGATCGACGTCGGCGGCTCGTGA

Upstream 100 bases:

>100_bases
AAAAGAACAACCGCAATAACCCTGATAACCCCGATAAGGCGGTCACCGACGATTTTCGCCCTGCTAAGATTGATGGATCA
ACTGCTCTTCCAGGACCCTC

Downstream 100 bases:

>100_bases
CGCGCGGCGCCCGCCGCGCGCGCGCCGTCGGCGCGAACGGGCGCTAGCGGGCTGCCGTCCGCGGCATCTGCGCGAGCACG
TCGATGCCGCGCGACGTGCG

Product: MarR family regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAKRCCILSPSLTGVLERMERDG
LIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLIEQRFGADALGEVYAALDKLIDVGGS

Sequences:

>Translated_145_residues
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAKRCCILSPSLTGVLERMERDG
LIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLIEQRFGADALGEVYAALDKLIDVGGS
>Mature_145_residues
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAKRCCILSPSLTGVLERMERDG
LIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLIEQRFGADALGEVYAALDKLIDVGGS

Specific function: Repressor for the homoprotocatechuate catabolic pathway hpc operon [H]

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012712
- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 16663; Mature: 16663

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCCHHHHHH
RCCILSPSLTGVLERMERDGLIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLI
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCHHHHHHHH
EQRFGADALGEVYAALDKLIDVGGS
HHHHCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNRTFDHRNLAMLLLEARETLMGRFRPILKEFALTEQQWRIIRVLDGEPSHELEAGQIAK
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCEEEEEECCCCCCCCCHHHHHH
RCCILSPSLTGVLERMERDGLIRRTRAQEDQRRLIVSLTPQSCQLVTQISPRIDEQYRLI
HHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHEEEEEECCHHHHHHHHHCCCHHHHHHHH
EQRFGADALGEVYAALDKLIDVGGS
HHHHCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8384293; 8550403 [H]