Click here to switch to the map view.

The map label for this gene is oruR [H]

Identifier: 53721652

GI number: 53721652

Start: 840345

End: 841472

Strand: Reverse

Name: oruR [H]

Synonym: BPSS0616

Alternate gene names: 53721652

Gene position: 841472-840345 (Counterclockwise)

Preceding gene: 53721659

Following gene: 53721651

Centisome position: 26.52

GC content: 69.95

Gene sequence:

>1128_bases
ATGCTCGCTCCGCTCAATTACACTGATCGTTTTTGCCATACCGCGCCGCAGCGCGCACCCGCGATGAAGCACGAAGAAAA
GAAAGGCACCGTTTCGATCGAGCTCGTCGAGTCGAGCCTCGCGCTGTCGCGGCGGCGCGGCGTCGACGACGCTTCGCTCC
TCGCGCAGGCGGGCATTGCCGGTGCGCTGCTCGCGCAGCCGAACGCGCGCGTGTCCGCGCGGCAGTACGGCGCGCTGTGG
AACGCGATCGCGCGCGCGCTCGACGACGAGTTCTTCGGCCAGGACTCACACCCGATGCGCTGCGGCAGCTTCATCGCGAT
GAGCCAGGCGGCGCTCACCGCGCGCAACGGGCTGCGCGCGCTCGCGCGCGCGGTCAACTTCATGCACTGCGTGCTCGACG
ATCTGCACGCGCAGCTCGACGCGAGCGCCGAGCGCGTACGGCTGCGCTTCGTGCATCGCAACAGCGCGAACCCGCCGGAG
ATGTTCGCGTATGCGACCTATTTCGTCATCGTCTACGGCCTCACGTGCTGGCTGATCGGGCGGCGCATTCCGCTGCTGCA
CGCGAGCTTTCGCTGCGGCGAGCCGCGCGCGGTCCACGAATATCGGCTGATGTTCTGCGACGACATGCGTTTCGGCGAGC
CCGATTCGTATGTCGATTTCGATCCGGCGTTCGCCGCGCTGCCCATCGTGCAGACGGCGCAGACGCTCAAGCCGTTCCTG
CGCGACGCGCCCGCGAGCTTCATCGTCAAGTATCGCAACCCGCACGCGCTCGGCGAGCGCGTGCGCGCGGCGCTGCGCGC
GCTGCCGCCCGCCGCGTGGCCGACCGCGCGCGCGCTCGCCGCGCGGCTGCACGTGGCCGAGGCGACGCTGCGGCGCAAGC
TGAAGCAGGAAGGCCATTCGTATCAATCGATCAAGGACGCGCTGCGGCGCGATCTCGCGTGCGAGGCGCTCGCCGATCCG
GCCCGCACGGTCGCCGACGTCGCCGCGGCGACGGGCTTCGCCGAGCCGAGCGCGTTCTACCGCGCGTTTCGCAAGTGGCG
CGGGATGAGCCCCGCAGACTACCGCGACGCCGCGCTCGCCGCGCGCGCGGCCGCTTCGCGCTTTCGCCGGAAACCGCCTA
CTCTTTAA

Upstream 100 bases:

>100_bases
TGGCTGCTTGTCTCCCGGGCGCTCACCGTGCTGCCGCGCGGCGCGCCTCGTTCGTTTTGTGTCGATCAGTCAAGTGTAGG
CAACGCGCGGGAACTGTTCG

Downstream 100 bases:

>100_bases
GCACCGGGCGCACGCCCTTCCCACGGCCCGGCTGCGGCGCCGCACCATGCGGCCGCGCGCCGCCGGCCGACACCGCGATG
CCCATGCCCCGTTCCTCGCC

Product: AraC family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 375; Mature: 375

Protein sequence:

>375_residues
MLAPLNYTDRFCHTAPQRAPAMKHEEKKGTVSIELVESSLALSRRRGVDDASLLAQAGIAGALLAQPNARVSARQYGALW
NAIARALDDEFFGQDSHPMRCGSFIAMSQAALTARNGLRALARAVNFMHCVLDDLHAQLDASAERVRLRFVHRNSANPPE
MFAYATYFVIVYGLTCWLIGRRIPLLHASFRCGEPRAVHEYRLMFCDDMRFGEPDSYVDFDPAFAALPIVQTAQTLKPFL
RDAPASFIVKYRNPHALGERVRAALRALPPAAWPTARALAARLHVAEATLRRKLKQEGHSYQSIKDALRRDLACEALADP
ARTVADVAAATGFAEPSAFYRAFRKWRGMSPADYRDAALAARAAASRFRRKPPTL

Sequences:

>Translated_375_residues
MLAPLNYTDRFCHTAPQRAPAMKHEEKKGTVSIELVESSLALSRRRGVDDASLLAQAGIAGALLAQPNARVSARQYGALW
NAIARALDDEFFGQDSHPMRCGSFIAMSQAALTARNGLRALARAVNFMHCVLDDLHAQLDASAERVRLRFVHRNSANPPE
MFAYATYFVIVYGLTCWLIGRRIPLLHASFRCGEPRAVHEYRLMFCDDMRFGEPDSYVDFDPAFAALPIVQTAQTLKPFL
RDAPASFIVKYRNPHALGERVRAALRALPPAAWPTARALAARLHVAEATLRRKLKQEGHSYQSIKDALRRDLACEALADP
ARTVADVAAATGFAEPSAFYRAFRKWRGMSPADYRDAALAARAAASRFRRKPPTL
>Mature_375_residues
MLAPLNYTDRFCHTAPQRAPAMKHEEKKGTVSIELVESSLALSRRRGVDDASLLAQAGIAGALLAQPNARVSARQYGALW
NAIARALDDEFFGQDSHPMRCGSFIAMSQAALTARNGLRALARAVNFMHCVLDDLHAQLDASAERVRLRFVHRNSANPPE
MFAYATYFVIVYGLTCWLIGRRIPLLHASFRCGEPRAVHEYRLMFCDDMRFGEPDSYVDFDPAFAALPIVQTAQTLKPFL
RDAPASFIVKYRNPHALGERVRAALRALPPAAWPTARALAARLHVAEATLRRKLKQEGHSYQSIKDALRRDLACEALADP
ARTVADVAAATGFAEPSAFYRAFRKWRGMSPADYRDAALAARAAASRFRRKPPTL

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 41590; Mature: 41590

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAPLNYTDRFCHTAPQRAPAMKHEEKKGTVSIELVESSLALSRRRGVDDASLLAQAGIA
CCCCCCCHHHHHHCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCC
GALLAQPNARVSARQYGALWNAIARALDDEFFGQDSHPMRCGSFIAMSQAALTARNGLRA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAVNFMHCVLDDLHAQLDASAERVRLRFVHRNSANPPEMFAYATYFVIVYGLTCWLIG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRIPLLHASFRCGEPRAVHEYRLMFCDDMRFGEPDSYVDFDPAFAALPIVQTAQTLKPFL
CCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDAPASFIVKYRNPHALGERVRAALRALPPAAWPTARALAARLHVAEATLRRKLKQEGHS
HCCCHHHEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
YQSIKDALRRDLACEALADPARTVADVAAATGFAEPSAFYRAFRKWRGMSPADYRDAALA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
ARAAASRFRRKPPTL
HHHHHHHHHCCCCCC
>Mature Secondary Structure
MLAPLNYTDRFCHTAPQRAPAMKHEEKKGTVSIELVESSLALSRRRGVDDASLLAQAGIA
CCCCCCCHHHHHHCCCCCCCCCCCHHCCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHCCC
GALLAQPNARVSARQYGALWNAIARALDDEFFGQDSHPMRCGSFIAMSQAALTARNGLRA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LARAVNFMHCVLDDLHAQLDASAERVRLRFVHRNSANPPEMFAYATYFVIVYGLTCWLIG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHH
RRIPLLHASFRCGEPRAVHEYRLMFCDDMRFGEPDSYVDFDPAFAALPIVQTAQTLKPFL
CCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RDAPASFIVKYRNPHALGERVRAALRALPPAAWPTARALAARLHVAEATLRRKLKQEGHS
HCCCHHHEEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
YQSIKDALRRDLACEALADPARTVADVAAATGFAEPSAFYRAFRKWRGMSPADYRDAALA
HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHH
ARAAASRFRRKPPTL
HHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]