| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is pchB
Identifier: 53721618
GI number: 53721618
Start: 791482
End: 791787
Strand: Reverse
Name: pchB
Synonym: BPSS0582
Alternate gene names: 53721618
Gene position: 791787-791482 (Counterclockwise)
Preceding gene: 53721619
Following gene: 53721617
Centisome position: 24.95
GC content: 70.26
Gene sequence:
>306_bases ATGAAGACACCGGACGAATGCACGGGCCTCGCCGACATCCGCGAAGCCATCGACCGCCTCGACGCCGACATCATCGCGGC GCTCGGCGCGCGCATGCAATACGTGAAGGCCGCCTCGCGCTTCAAGCCGACCGAGGCAAGCATCGCAGCGCCGGAGCGCG TCGCGGCGATGCTGCCCGACCGGCGCCGCTGGGCCGAGCAGGCCGGGCTCGACGGCGCGTTCGTCGAGGCGCTGTATGCG CAAGTCATCGCGTGGTACATCGAACAGCAAACGCGGCACTGGCGCCGCCAGCGGGGGCTCGCATGA
Upstream 100 bases:
>100_bases TCGACGGCGACCATTTCTATCTGCGCCACGCGTACCCGGCGCTCATCGCGCACATCGCCGGGCAGATCGACCGCTCGCTG CGCCCACTCAAGGAACACTC
Downstream 100 bases:
>100_bases GCGCCCGCCTGTCCGCGCTGCTCGATACGTTCGCGCGCGCCGCGCGCCGCGCGGCCGACACGGGCGAGCCCGTGCTCGCC GCGGCATCGTTTCCGCTGCG
Product: isochorismate-pyruvate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 101; Mature: 101
Protein sequence:
>101_residues MKTPDECTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVEALYA QVIAWYIEQQTRHWRRQRGLA
Sequences:
>Translated_101_residues MKTPDECTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVEALYA QVIAWYIEQQTRHWRRQRGLA >Mature_101_residues MKTPDECTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPDRRRWAEQAGLDGAFVEALYA QVIAWYIEQQTRHWRRQRGLA
Specific function: Has isochorismate-pyruvate lyase activity. Probably involved in the conversion of isochorismate to salicylate and pyruvate [H]
COG id: COG1605
COG function: function code E; Chorismate mutase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 chorismate mutase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002701 - InterPro: IPR020822 - InterPro: IPR008241 [H]
Pfam domain/function: PF01817 CM_2 [H]
EC number: NA
Molecular weight: Translated: 11386; Mature: 11386
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTPDECTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPD CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCH RRRWAEQAGLDGAFVEALYAQVIAWYIEQQTRHWRRQRGLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKTPDECTGLADIREAIDRLDADIIAALGARMQYVKAASRFKPTEASIAAPERVAAMLPD CCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHCCH RRRWAEQAGLDGAFVEALYAQVIAWYIEQQTRHWRRQRGLA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7500944; 10984043 [H]