| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is sacC [H]
Identifier: 53721578
GI number: 53721578
Start: 739867
End: 741531
Strand: Reverse
Name: sacC [H]
Synonym: BPSS0542
Alternate gene names: 53721578
Gene position: 741531-739867 (Counterclockwise)
Preceding gene: 53721579
Following gene: 53721549
Centisome position: 23.37
GC content: 67.75
Gene sequence:
>1665_bases ATGCATTCGATGTCGAACCCTCGCTTACGCTTTTCCTCCGTCGTTTACGGCCTCATCGCGCTCGCCGCGTGTGCAAGCTT CGCCGCGCATGCGTCGGGCGCGCGATGCGCGGCATCGCCCGCGAAGTCCGCCGACGGCACGCCGCAATGGCGGCCCGCGT TGCACTACACGCCCCGACGCAACTGGATGAACGACCCGAACGGCCTCGTCTACGAAAACGGCGTCTATCACCTGTTCTAT CAATACAATCCGCACGGCAACTTCTGGGACGACATGTCGTGGGGGCACGCGACGAGCCGCGATCTCGTGCACTGGGACGA GCAGCCGGTGGCGATGCCGGCGAACGCGCGCGAGGATATCTTCTCCGGCTCCATCGTCGCGGACGCACGCAACACGTCGG GCCTCGGCACCCCGAATGCGCCGCCGCTCGTCGCGCTCTATACGAGCGTCTACAAGGCGGGCTCCGGCCACGAACCCGGT ACGCAGGCGCAATCGCTCGCGTACAGCATCGATCACGGCAAGACGTGGCGGCCGTACGCGCACAATCCGGTGCTGACGCT CGCGCCCGAATCGCGGCATTTCCGCGATCCGAACGTGACGTGGTACGCGCCGGGCGGCTACTGGATGATGACGGCGGTTG TCGCCGACGCGCCCGTCGTCAAGCTGTATCGGTCGAGCGACCTGATTCGCTGGGATTTCCTGAGCGACTTCACGCTGCCC GACGTCCCGCATCGCGGCGCGCTGTGGGAAATGCCCGAGCTGCTGCCGATGCCGCTCGACGGCGACGCCGCGCGCATGAA GTGGGTGATGATCGTCAACGTCAATCCGTGGTCGATCGCGGGCGGCTCGGGCGCGATGTATTTCATCGGCGAGTTCGACG GCAGAACGTTCACGCCCGATCGCGCCGCGCCGGCGAACGCCGATCCCGCGCAATACTCGTGGCTCGATCACGGTGCCGAC TACTACGCGGCCGGCACGTTCGCGAACGCGCCGGGCGAGGGGCCGGTAGCGATCGCATGGATGAGCAATTGGGACTATGC GGAGCGCATTCCGACCACGCCGTGGAAAGGCGCGATGGCGTTACCGCGCGAGCTTGCGCTGAAGACGATCGACGGCCGGC CGCGAGTGACGGTCGCGCCCGCGCGCGCGTTCGACGCGTTCGCCCGCACGCGGCCCGCCGTGCGTATCGGCTCGCTCGCG GTCGCGTCCGCGACGCGAGAGCTCGGCGCCGACGCACGCGGCACCGTGCAGCGCATCGCAGTGACGATCGAGCCGCGCTC GGCCAGGCGCGCCGGCTTGATCGTGCGGCGCTCGGCGAACGGCCGCGTCGGCACGCGTATCGTCTACGATTCGTCGGCGC ACACGCTGAGCGTCGATCGCTCGGCATCCGGCGAAACGAACTTCTCGAACGCGTTCAGCCAGCGGCATATCGTTGCGCTA CCGCTCGTGAACGGGAAGCTGCGGCTCGACGTGATCGTCGATCGCGATTCCGTCGAAGTGTTCGACGGCGACGGCCGGAC CGTCATCACCGATCTCGTGTTTCCGTCGCCTGCCGACAACCGGCTCGCCGTGTTCGCCGAAGGCGGCGACGCGACGTTCG GCGATGTCGTGGTGACGAATCTCGACGAGACCGCGGGCGAGCGGCGAGGGTGCCCGACCTCATAG
Upstream 100 bases:
>100_bases GCCTTCCTGCGCGCGGACGGCCGGACACTCCTGCGCCGTGCGCGCCGGCTCCGGCCGCCGTCGCGTATCGCACCGCACGC CGCGCCTGCGGCAATGAAGG
Downstream 100 bases:
>100_bases GGATTGCTGACGATTGCGGCACCGGGAAATTGCGGCACCGAGACGGCCGACGCCGCCGACGCATGACGATGCGAGCGCAC GTGTCCGTGCCACGCGCATG
Product: glycosyl hydrolase
Products: NA
Alternate protein names: Beta-D-fructofuranosidase; Exo-beta-D-fructosidase; Exo-levanase [H]
Number of amino acids: Translated: 554; Mature: 554
Protein sequence:
>554_residues MHSMSNPRLRFSSVVYGLIALAACASFAAHASGARCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY QYNPHGNFWDDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGSGHEPG TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWLDHGAD YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS
Sequences:
>Translated_554_residues MHSMSNPRLRFSSVVYGLIALAACASFAAHASGARCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY QYNPHGNFWDDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGSGHEPG TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWLDHGAD YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS >Mature_554_residues MHSMSNPRLRFSSVVYGLIALAACASFAAHASGARCAASPAKSADGTPQWRPALHYTPRRNWMNDPNGLVYENGVYHLFY QYNPHGNFWDDMSWGHATSRDLVHWDEQPVAMPANAREDIFSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGSGHEPG TQAQSLAYSIDHGKTWRPYAHNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPDRAAPANADPAQYSWLDHGAD YYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMALPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLA VASATRELGADARGTVQRIAVTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTNLDETAGERRGCPTS
Specific function: Exo-fructosidase that can hydrolyze both levan and inulin, leading to the production of free fructose. Is also able to hydrolyze sucrose and to a small extent raffinose, but not melezitose, stachylose, cellobiose, maltose, and lactose [H]
COG id: COG1621
COG function: function code G; Beta-fructosidases (levanase/invertase)
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 32 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322029, Length=498, Percent_Identity=32.5301204819277, Blast_Score=235, Evalue=2e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008985 - InterPro: IPR010496 - InterPro: IPR001362 - InterPro: IPR018053 - InterPro: IPR013189 - InterPro: IPR013148 - InterPro: IPR011040 [H]
Pfam domain/function: PF06439 DUF1080; PF08244 Glyco_hydro_32C; PF00251 Glyco_hydro_32N [H]
EC number: =3.2.1.80 [H]
Molecular weight: Translated: 60331; Mature: 60331
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00609 GLYCOSYL_HYDROL_F32
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSMSNPRLRFSSVVYGLIALAACASFAAHASGARCAASPAKSADGTPQWRPALHYTPRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEECCCC NWMNDPNGLVYENGVYHLFYQYNPHGNFWDDMSWGHATSRDLVHWDEQPVAMPANAREDI CCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCHHHH FSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGSGHEPGTQAQSLAYSIDHGKTWRPYA CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCC HNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP CCCEEEECCCCCCCCCCCEEEECCCCEEEEEEHHCCCCEEEEECCCCEEEEECCCCCCCC DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPD CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEECCCCEECCC RAAPANADPAQYSWLDHGADYYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMA CCCCCCCCCCEEEHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCC LPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLAVASATRELGADARGTVQRIA CCHHHHEEECCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEEE VTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL EEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCEEEEE PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTN EEECCEEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC LDETAGERRGCPTS CHHHHHHCCCCCCC >Mature Secondary Structure MHSMSNPRLRFSSVVYGLIALAACASFAAHASGARCAASPAKSADGTPQWRPALHYTPRR CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCEEECCCC NWMNDPNGLVYENGVYHLFYQYNPHGNFWDDMSWGHATSRDLVHWDEQPVAMPANAREDI CCCCCCCCEEEECCEEEEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCEECCCCCHHHH FSGSIVADARNTSGLGTPNAPPLVALYTSVYKAGSGHEPGTQAQSLAYSIDHGKTWRPYA CCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHEEEECCCCCCCCCCC HNPVLTLAPESRHFRDPNVTWYAPGGYWMMTAVVADAPVVKLYRSSDLIRWDFLSDFTLP CCCEEEECCCCCCCCCCCEEEECCCCEEEEEEHHCCCCEEEEECCCCEEEEECCCCCCCC DVPHRGALWEMPELLPMPLDGDAARMKWVMIVNVNPWSIAGGSGAMYFIGEFDGRTFTPD CCCCCCCCCCCHHHCCCCCCCCCCEEEEEEEEECCCCEEECCCCEEEEEEECCCCEECCC RAAPANADPAQYSWLDHGADYYAAGTFANAPGEGPVAIAWMSNWDYAERIPTTPWKGAMA CCCCCCCCCCEEEHHHCCCCEEEECCCCCCCCCCCEEEEEECCCCHHHHCCCCCCCCCCC LPRELALKTIDGRPRVTVAPARAFDAFARTRPAVRIGSLAVASATRELGADARGTVQRIA CCHHHHEEECCCCCCEEECCHHHHHHHHHCCCCEEECCCHHHHHHHHHCCCCCCCEEEEE VTIEPRSARRAGLIVRRSANGRVGTRIVYDSSAHTLSVDRSASGETNFSNAFSQRHIVAL EEECCCCCCCCCEEEEECCCCCEEEEEEECCCCCEEEECCCCCCCCCHHHHHCCCEEEEE PLVNGKLRLDVIVDRDSVEVFDGDGRTVITDLVFPSPADNRLAVFAEGGDATFGDVVVTN EEECCEEEEEEEEECCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEC LDETAGERRGCPTS CHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3112519; 3120151; 9141695; 9384377; 2117666 [H]