| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721500
Identifier: 53721500
GI number: 53721500
Start: 631645
End: 633219
Strand: Reverse
Name: 53721500
Synonym: BPSS0463
Alternate gene names: NA
Gene position: 633219-631645 (Counterclockwise)
Preceding gene: 53721501
Following gene: 53721499
Centisome position: 19.96
GC content: 66.22
Gene sequence:
>1575_bases ATGAAGAAGAAGCTCATCTGTCTGCTCGTGGCCGGGGCGCTGCCCGGCTTCGCGGGCGCCGCGTCGACGAGCGCGCAGAT CAAGGCGCTGCAGGCGCAGTTGAACGCGCTGCAGGCGCAGGTGAAGGAGCTGCGCACCGCGCTCGCGTCGCAGCACGGCG CGGCGGGCGGCGGCGCATCGAGCCAGGGCGCAGCGGCGGCCGCCGCGGCCGCGCCCGTCGACGAATCGTCGCCGGATTAC GGCCGCGCGAGCGCCACGCTGACCCATGACGACGTCACGCAGATGAAGCAGCAGATCGCGAACCAGCAGTTGAAGGTCGA TGCGCTGACCGACGCGGCGAACACCGGGCCGATCGCCGGCCTGTCGGTGACGGGCTACATCGATCCGACCTACGTGTTCA ACCGCGCGGCCGGCACGTCATCGTTCCTGTTCGCGAATCACGAGAGCAACTACAACTACTTCAACAGCACGTTCGGCGAT TTGTACCTCGACATCAAGAAGACGTTCGGCGTCGGGCCGATGGCGCCGTCCGCCGAGATCACGCTGATGCCGAACCGCGG CAACGGCATCACGCTGCTGCAGAACTCGCGCGGCAACATCGGCAACAACATCCTGAACACCGCGGTCGTCAACGTGCCGC TCAGCGCGACGACGACGCTCGTCGCGGGCCTCGTGCCGAGCTTCGGCGGCTACGAGGTGCAGCAGTCGAACCAGATGCTC ACGCTCACGCACAACCTGCTGTACGACTTCTCCGATCCGGGCAGCTACATCGGCATCGGCGCGAACTACACGAAGGGCAA CTGGGCGTGGAAGTTCCTGCTCGGCAACGAGCAGTACCGCACGTACGGCTCGGTCACGCAAACCGGCACGAACGCGCTCG GCGAGCCGATCACGACGAGCAACAAGGTGCCGACGTTCACCGCGCGCGTCGACTACACGTGGTCGAGCGCGCTCGATCTG GGCGGCTCGTTCAACATCGGGCGGCAGACGCTCGGCAGCGCGACGACGCAATCGGGCGCGACCGTCTACGGCCCGGGCGG CCAGGCGTCGAGCCCGTACGGCGCGTTCTTCTTCGCCGAGGCGGATGCGACCTACACGCTTGCCGACATTCAGTACAACG CGGAAATCGACTATGGCCAGCAACAACACGCCGCGTTCAACGGCGGCCGCGCGCAATGGTATGGCCTGTCGCTGCTCGCG CACCGCAAGTTCAACGTGCCGGTGCTCGGCCGGATGGGCGCGACGCTGCGCTACGATTTCCTGGCGAACGGCAAGAACGG CGGCGGCGGCGGCGGGATCGCGCTGAACGGCAATGGGATGGATACCGCGGACGGCTTCGGCATCGATGCGGACTGCCTCG CGACGTCGAAGGCGAACGGCGGCCTCGGCTTCGAATGCAAGGGCGCGAACCGGCAGGACGTCGCGCTCGATCTGCTGTTC TATCCGACCCAGCAGATCACCGTGAAGGTCGAATACCGGCACGACTGGGCGAACAACAAGGTGTTCCTGCGGAACGACGG CTCGTACAGCAAGTCCAACGATCTGCTCGCGACGCAGTTCATCTACTCGTTCTGA
Upstream 100 bases:
>100_bases CCGCGACGCGCAAGCCGCTCGGCGCCGCCTGAGCGCGCTGCGCCCGCCCGAACGCACATCGAATCGAAGTCCTTCGCAAT ACGACACCCAGGAGAATCGC
Downstream 100 bases:
>100_bases CGTTCGCGGCGCAACGGCGTGCGGCGGCTTGCCGCACGCGCGTGCGCGCCGCGCCCCCGTTTTTCCGCATCGCGCCCCGC CGCCGCACGACATGGCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 524; Mature: 524
Protein sequence:
>524_residues MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGASSQGAAAAAAAAPVDESSPDY GRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAGLSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGD LYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTSNKVPTFTARVDYTWSSALDL GGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAEADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLA HRKFNVPVLGRMGATLRYDFLANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF
Sequences:
>Translated_524_residues MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGASSQGAAAAAAAAPVDESSPDY GRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAGLSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGD LYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTSNKVPTFTARVDYTWSSALDL GGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAEADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLA HRKFNVPVLGRMGATLRYDFLANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF >Mature_524_residues MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGASSQGAAAAAAAAPVDESSPDY GRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAGLSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGD LYLDIKKTFGVGPMAPSAEITLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTSNKVPTFTARVDYTWSSALDL GGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAEADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLA HRKFNVPVLGRMGATLRYDFLANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55274; Mature: 55274
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGAS CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQGAAAAAAAAPVDESSPDYGRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAG CCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC LSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGDLYLDIKKTFGVGPMAPSAEI EEEEECCCCHHEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCEE TLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML EEEECCCCCEEEEECCCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCEE TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTS EEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCHHCCCCCCCC NKVPTFTARVDYTWSSALDLGGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAE CCCCEEEEEEEEEEHHHHCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEE ADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLAHRKFNVPVLGRMGATLRYDF CCCEEEEEEEEEECEECCCCHHHHCCCCCCEEEEEEEEEEECCCCCCEEECCCCEEEEEE LANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF EECCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEECCCCCCCCEEECCCCCCCEEEEEEE YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF ECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEHHHHCC >Mature Secondary Structure MKKKLICLLVAGALPGFAGAASTSAQIKALQAQLNALQAQVKELRTALASQHGAAGGGAS CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SQGAAAAAAAAPVDESSPDYGRASATLTHDDVTQMKQQIANQQLKVDALTDAANTGPIAG CCCCHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCC LSVTGYIDPTYVFNRAAGTSSFLFANHESNYNYFNSTFGDLYLDIKKTFGVGPMAPSAEI EEEEECCCCHHEEECCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCEE TLMPNRGNGITLLQNSRGNIGNNILNTAVVNVPLSATTTLVAGLVPSFGGYEVQQSNQML EEEECCCCCEEEEECCCCCCCCHHHEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCEE TLTHNLLYDFSDPGSYIGIGANYTKGNWAWKFLLGNEQYRTYGSVTQTGTNALGEPITTS EEEEEEEEEECCCCCEEEECCCCCCCCEEEEEEECCCCEEEECCEECCCCHHCCCCCCCC NKVPTFTARVDYTWSSALDLGGSFNIGRQTLGSATTQSGATVYGPGGQASSPYGAFFFAE CCCCEEEEEEEEEEHHHHCCCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCEEEEEE ADATYTLADIQYNAEIDYGQQQHAAFNGGRAQWYGLSLLAHRKFNVPVLGRMGATLRYDF CCCEEEEEEEEEECEECCCCHHHHCCCCCCEEEEEEEEEEECCCCCCEEECCCCEEEEEE LANGKNGGGGGGIALNGNGMDTADGFGIDADCLATSKANGGLGFECKGANRQDVALDLLF EECCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEECCCCCCCCEEECCCCCCCEEEEEEE YPTQQITVKVEYRHDWANNKVFLRNDGSYSKSNDLLATQFIYSF ECCEEEEEEEEEEECCCCCEEEEECCCCCCCCCCEEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA