| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is ordL [H]
Identifier: 53721499
GI number: 53721499
Start: 630210
End: 631541
Strand: Reverse
Name: ordL [H]
Synonym: BPSS0462
Alternate gene names: 53721499
Gene position: 631541-630210 (Counterclockwise)
Preceding gene: 53721500
Following gene: 53721498
Centisome position: 19.9
GC content: 73.95
Gene sequence:
>1332_bases ATGCCGCCCGACTTTCACGGCCCGCCCATGACCGATACCTTCGCCCGCCGCGCCGACGCGCTCGCGCGCCGCTCGTATTA CGAAGCCACCGTTCGCCGCCCGGCCGATGACCCGGCGCTCGCCGAGGCGCTCGACGTCGACGTCTGCGTGATCGGCGCGG GCTTCGCCGGTCTGTCGACCGCGCTCGACTGCCGCGCGCGCGGCCTGTCGGTCGCCGTGCTCGACGCACGCCGGCCGGGC TGGGGCGCGTCCGGCCGCAACGGCGGACAGTTGATCGCGGGCTTCGCGAAGGACGGCGAGATCGAGCGCCAGCTCGGCGT GGAAGGCGCGCGCGCGGCATGGGCGCTGTCGCTCGATGCGATCGCGCTCGTCGACGAGCGCATCGCGCGCCACGGCATCG ACTGCGATCTCGCGCGCGGCTATCTGAGCGTCGCGACGCATCCGCGCCGCGTGCCGGAGCTGCGGCAGTGGATGGAGGGC GCGACGGCGCGCTGGGGCCACCCGTCGCTCGAATGGCTCGACGCGCGCGCGGTGCGCGCGCGCATCGCTTCGCCGCGCTA TGTCGCGGGCGTCCATGATCCGCTGTCCGGCCATCTGCATCCGCTCAAGTACTGCCTCGGGCTCGCCGACGCCGCGCGGC GCGAAGGCGCGCGGCTGTTCTCGCACACGCCCGCGCTCGAAGTCGTGCGCGGCGCGCGGCCCATCGTGCGCACGCCCGCG GGCGAGGTGCGCTGCCGCCACGTCGTCGCGTGCTGCAACGCCGGCCCGGGCGGCGTGCTGCCCGCCGCGACGGCCGCGCG CATCGCGCCCGTCGCGTCGTATATCGTCGCGACCGAGCCGCTCGGCGCCGATCGCGCGAACGCGCTGATCCCCCGGCGCG AGGCGGCATGCGACAACAACTTCTTTCTCGACTACTTCCGGCTGTCCGCCGATCACCGGATGCTGTTCGGCGGCCGCGCG AGCTCGGCGGGCGCGTCGCCCGACGCGCTCGTCGATGCGATGCGCAAACGGATGACGGGCGCGTTCCCGCAGCTCGCCGA CACGCGCATCGAATTCGCATGGGGCGGCTTCGTCGACGTGACCCGCAATCGCGCGCCGGATTTCGGCGCGATCGATCCGA ACTACTTCTATCTCCAGGGCTTCAGCGGCCACGGCGTCGCGCTGGCCGGCATCGCGGGCCGCATCGTCGCGCAGGCGATC GCGGGCGATTCGCGCGCGTTCGATCTGTTCGCTCGGCTGCGGCACCGGCGCTTTCCCGGCGGCCCCGCTTGGCGGCAGCC CGCGCTCGCGCTCGGCATGCTGTATCACCGCGTGCGCGAGCTGCTGCGCTGA
Upstream 100 bases:
>100_bases TCGCGGCGCAACGGCGTGCGGCGGCTTGCCGCACGCGCGTGCGCGCCGCGCCCCCGTTTTTCCGCATCGCGCCCCGCCGC CGCACGACATGGCGAAGCGC
Downstream 100 bases:
>100_bases GGAGCGCGCGGGCCCGCGCCGCGCAAGCGGCGCCGCCGAACCGAACCCCCATCAAAGCGATCCCTACGTCATGCTCAAGT TCATCAACCAACCGCACGCC
Product: oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFAGLSTALDCRARGLSVAVLDARRPG WGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCDLARGYLSVATHPRRVPELRQWMEG ATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREGARLFSHTPALEVVRGARPIVRTPA GEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAACDNNFFLDYFRLSADHRMLFGGRA SSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRIVAQAI AGDSRAFDLFARLRHRRFPGGPAWRQPALALGMLYHRVRELLR
Sequences:
>Translated_443_residues MPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFAGLSTALDCRARGLSVAVLDARRPG WGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCDLARGYLSVATHPRRVPELRQWMEG ATARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREGARLFSHTPALEVVRGARPIVRTPA GEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAACDNNFFLDYFRLSADHRMLFGGRA SSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRIVAQAI AGDSRAFDLFARLRHRRFPGGPAWRQPALALGMLYHRVRELLR >Mature_442_residues PPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFAGLSTALDCRARGLSVAVLDARRPGW GASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDAIALVDERIARHGIDCDLARGYLSVATHPRRVPELRQWMEGA TARWGHPSLEWLDARAVRARIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREGARLFSHTPALEVVRGARPIVRTPAG EVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAACDNNFFLDYFRLSADHRMLFGGRAS SAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDVTRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRIVAQAIA GDSRAFDLFARLRHRRFPGGPAWRQPALALGMLYHRVRELLR
Specific function: Unknown
COG id: COG0665
COG function: function code E; Glycine/D-amino acid oxidases (deaminating)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=419, Percent_Identity=38.4248210023866, Blast_Score=310, Evalue=1e-85,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 47770; Mature: 47639
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFAGLST CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHHHHHH ALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDA HHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEEHHHH IALVDERIARHGIDCDLARGYLSVATHPRRVPELRQWMEGATARWGHPSLEWLDARAVRA HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREGARLFSHTPALEVVRGARPIVRTPA HHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCEECCC GEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAACDNN CHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHCCCCC FFLDYFRLSADHRMLFGGRASSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDV EEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEECCEEEE TRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRIVAQAIAGDSRAFDLFARLRHRRFPG CCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC GPAWRQPALALGMLYHRVRELLR CCCCCCHHHHHHHHHHHHHHHHC >Mature Secondary Structure PPDFHGPPMTDTFARRADALARRSYYEATVRRPADDPALAEALDVDVCVIGAGFAGLST CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEEEEECCHHHHHH ALDCRARGLSVAVLDARRPGWGASGRNGGQLIAGFAKDGEIERQLGVEGARAAWALSLDA HHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCCCCCCEEEEHHHH IALVDERIARHGIDCDLARGYLSVATHPRRVPELRQWMEGATARWGHPSLEWLDARAVRA HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHH RIASPRYVAGVHDPLSGHLHPLKYCLGLADAARREGARLFSHTPALEVVRGARPIVRTPA HHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHCCCCCEECCC GEVRCRHVVACCNAGPGGVLPAATAARIAPVASYIVATEPLGADRANALIPRREAACDNN CHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHCCCCC FFLDYFRLSADHRMLFGGRASSAGASPDALVDAMRKRMTGAFPQLADTRIEFAWGGFVDV EEEEEEEECCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCHHHCCEEEEEECCEEEE TRNRAPDFGAIDPNYFYLQGFSGHGVALAGIAGRIVAQAIAGDSRAFDLFARLRHRRFPG CCCCCCCCCCCCCCEEEEECCCCCCEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC GPAWRQPALALGMLYHRVRELLR CCCCCCHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]