| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721438
Identifier: 53721438
GI number: 53721438
Start: 541537
End: 542235
Strand: Reverse
Name: 53721438
Synonym: BPSS0400
Alternate gene names: NA
Gene position: 542235-541537 (Counterclockwise)
Preceding gene: 53721446
Following gene: 53721437
Centisome position: 17.09
GC content: 55.79
Gene sequence:
>699_bases GTGGCTTGCGTTTGCCACAAATCCGCCACGCGCCCGGAACGCCGGAATATGCGTGGCTATGGGGTGAGTCGTCGTGCTAG GATTCGCAAAAATACAAGCGGGGATGCGATGAAGAAGGTGTGGCAATGCCTTGAGGTCGGCTTCGCGCTATGTGCGCTCG GAATCGTGGCCTTGTTTCTCGTCTATGCGTTCAAATTGCACAGCAATGATGCCGCTGGCTGGGTACAGGCAGTCGGATCG ATAGCCGGCATCTTCATTGCCATCTGGATCGCTGGATCACAGCATCGTGCCGATGTGGCTCGTCGCGCGGACGAAGACGC GAGGTCAGAGTACCTACTGGAGGCGGAACTGGCATGGCTGAGTACCGAGGTCGTCGGTTTTCTCGGCCAGTTCCGTGACA TCAAGGCGGGCTTTCCAATAGAAGATAGATTCTCTGAAGATGACGTCAGGGATTTGCTCGATCGATTGTCCTGGTGCCGC CAGCGCGCCCGGCACAAGACGCATTTATGGATGGTCGGGCAACTGCGTTCGTCCCTCATGGGTACTGTTCGCGCCATTCG TAGCAAAATGGCTCATACACTGATGGTATTGACCGATGATGACGTCAAATTGATCAACGATCTTCGGCTGGCGGCAATAG AAGTTTCGGATCTCGCGTCACGTGCGAAAGCGATTCTTGGTCCCTCTGCGGGTGCATGA
Upstream 100 bases:
>100_bases CCGGTAAAAAATGGCGGGGCGCACATACGGGCCGCCCCGCCGAAAGGCCGCGCTTATCCGAGAGGAAATCCCGCGCGCGG CAAGCGGGGAACTGCTGTGT
Downstream 100 bases:
>100_bases TTACAGCGCTCTTGCTTGGTGGGCGACGCAGAGAAACCAGACACAGCCGATAGTGATGCCGTAGGCGAGGATCATCCCGA AAGCCCGAGCGAGACGGCCG
Product: bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 232; Mature: 231
Protein sequence:
>232_residues MACVCHKSATRPERRNMRGYGVSRRARIRKNTSGDAMKKVWQCLEVGFALCALGIVALFLVYAFKLHSNDAAGWVQAVGS IAGIFIAIWIAGSQHRADVARRADEDARSEYLLEAELAWLSTEVVGFLGQFRDIKAGFPIEDRFSEDDVRDLLDRLSWCR QRARHKTHLWMVGQLRSSLMGTVRAIRSKMAHTLMVLTDDDVKLINDLRLAAIEVSDLASRAKAILGPSAGA
Sequences:
>Translated_232_residues MACVCHKSATRPERRNMRGYGVSRRARIRKNTSGDAMKKVWQCLEVGFALCALGIVALFLVYAFKLHSNDAAGWVQAVGS IAGIFIAIWIAGSQHRADVARRADEDARSEYLLEAELAWLSTEVVGFLGQFRDIKAGFPIEDRFSEDDVRDLLDRLSWCR QRARHKTHLWMVGQLRSSLMGTVRAIRSKMAHTLMVLTDDDVKLINDLRLAAIEVSDLASRAKAILGPSAGA >Mature_231_residues ACVCHKSATRPERRNMRGYGVSRRARIRKNTSGDAMKKVWQCLEVGFALCALGIVALFLVYAFKLHSNDAAGWVQAVGSI AGIFIAIWIAGSQHRADVARRADEDARSEYLLEAELAWLSTEVVGFLGQFRDIKAGFPIEDRFSEDDVRDLLDRLSWCRQ RARHKTHLWMVGQLRSSLMGTVRAIRSKMAHTLMVLTDDDVKLINDLRLAAIEVSDLASRAKAILGPSAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25828; Mature: 25697
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACVCHKSATRPERRNMRGYGVSRRARIRKNTSGDAMKKVWQCLEVGFALCALGIVALFL CCEECCCCCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYAFKLHSNDAAGWVQAVGSIAGIFIAIWIAGSQHRADVARRADEDARSEYLLEAELAWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH STEVVGFLGQFRDIKAGFPIEDRFSEDDVRDLLDRLSWCRQRARHKTHLWMVGQLRSSLM HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GTVRAIRSKMAHTLMVLTDDDVKLINDLRLAAIEVSDLASRAKAILGPSAGA HHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure ACVCHKSATRPERRNMRGYGVSRRARIRKNTSGDAMKKVWQCLEVGFALCALGIVALFL CEECCCCCCCCHHHCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VYAFKLHSNDAAGWVQAVGSIAGIFIAIWIAGSQHRADVARRADEDARSEYLLEAELAWL HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHH STEVVGFLGQFRDIKAGFPIEDRFSEDDVRDLLDRLSWCRQRARHKTHLWMVGQLRSSLM HHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH GTVRAIRSKMAHTLMVLTDDDVKLINDLRLAAIEVSDLASRAKAILGPSAGA HHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA