| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is murI [H]
Identifier: 53721405
GI number: 53721405
Start: 509211
End: 510083
Strand: Reverse
Name: murI [H]
Synonym: BPSS0370
Alternate gene names: 53721405
Gene position: 510083-509211 (Counterclockwise)
Preceding gene: 53721406
Following gene: 53721404
Centisome position: 16.08
GC content: 72.51
Gene sequence:
>873_bases ATGACGACGCCGTACGCGCCCGATTCCCCCGCACCGTCCGCGCGCGCGCCGATCGGCGTCTTCGATTCGGGGCTGGGCGG CCTGTCGGTACTGCGCGCGGTGCGCGAGCGGTTGCCCGACGAGGCGCTCGTCTACGTCGCCGATTCACGCCATGCGCCCT ATGGTCCGCGCGATGACGTGTTCATCGTCGAGCGCACGCTCGCGATCGGCGAATGGCTCGTCGCGCAAGGCGCGAAGGCG CTCGTCGTCGCGTGCAACACGGCCACCGCGCAATCGATCGCGATCGTGCGCGAACGTCTGCCGATCCCGCTCGTCGGCGT CGAGCCCGGCATCAAGCCGGCGGCGCTGCATTCGAAGACGCGCGTCGCGGGCGTGCTCGCCACCCAGGCGACGCTGCGCA GCGCGCGCTTCGAAGCGCTGCTCGCGCGCCACGCGGCCGATTGCCGCTTTCTCTGCCAGCCGGGGCACGGCCTCGTCGAG GCGATCGAGCGCGGCGACACCGGCTCGCCCGCGTTGCGCGCGCTGCTCGCAAGCTACCTCGAGCCGATGCTCGAGGCCGG CGCCGATACGCTCGTGCTCGGCTGCACGCACTACCCGTTCCTCGACGCGGCGATCCGCGACGTGACGCGCAACCGCCTGC ATCTGATCGACACGGGCGACGCGATCGCCCGCCAGCTCGCGCGCGTTCTCGACGAGCGCGGGCTGCGCGCGCCCGCCTCG CCCCGGCCGGCGCCGCTGCCGCGCTTTTGCTCGACGAGCGACGGCCGGCAATTGCAGGCGCTCGCCGCGACGCTGCTCGG GCTCGACGCACCCGTCGAATCCGTCACCATTTCTTCTCCCAGCACCGCCGCATCGGCCGCCGATCCGGCATAA
Upstream 100 bases:
>100_bases GGCAAGGTCGGCATTCAGAACTATCAGCAGTCGATGATGGGCTCGCCGGAATAATTCCCGCTCGTTGATATTTCGTTCGA TTCCCGCCCGAGTCGCCCGC
Downstream 100 bases:
>100_bases CGCACCGCCGCGCCCCCGGCAAATCCCTTCCAAGCATCTGGTTTTGTTACAAAAAACCCGGAGTCGCGCTTGCCAACCCT CACAAATATAATGATAATAA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQGAKA LVVACNTATAQSIAIVRERLPIPLVGVEPGIKPAALHSKTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVE AIERGDTGSPALRALLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPAS PRPAPLPRFCSTSDGRQLQALAATLLGLDAPVESVTISSPSTAASAADPA
Sequences:
>Translated_290_residues MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQGAKA LVVACNTATAQSIAIVRERLPIPLVGVEPGIKPAALHSKTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVE AIERGDTGSPALRALLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPAS PRPAPLPRFCSTSDGRQLQALAATLLGLDAPVESVTISSPSTAASAADPA >Mature_289_residues TTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDVFIVERTLAIGEWLVAQGAKAL VVACNTATAQSIAIVRERLPIPLVGVEPGIKPAALHSKTRVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEA IERGDTGSPALRALLASYLEPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPASP RPAPLPRFCSTSDGRQLQALAATLLGLDAPVESVTISSPSTAASAADPA
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=232, Percent_Identity=38.3620689655172, Blast_Score=134, Evalue=6e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 30464; Mature: 30333
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV CCCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCE FIVERTLAIGEWLVAQGAKALVVACNTATAQSIAIVRERLPIPLVGVEPGIKPAALHSKT EEEEHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH RVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYL HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHH EPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPAS HHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCC PRPAPLPRFCSTSDGRQLQALAATLLGLDAPVESVTISSPSTAASAADPA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC >Mature Secondary Structure TTPYAPDSPAPSARAPIGVFDSGLGGLSVLRAVRERLPDEALVYVADSRHAPYGPRDDV CCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCE FIVERTLAIGEWLVAQGAKALVVACNTATAQSIAIVRERLPIPLVGVEPGIKPAALHSKT EEEEHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHCCCCCEECCCCCCCHHHHHHHH RVAGVLATQATLRSARFEALLARHAADCRFLCQPGHGLVEAIERGDTGSPALRALLASYL HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHH EPMLEAGADTLVLGCTHYPFLDAAIRDVTRNRLHLIDTGDAIARQLARVLDERGLRAPAS HHHHHCCCCEEEEECCCCCHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHCCCCCCCC PRPAPLPRFCSTSDGRQLQALAATLLGLDAPVESVTISSPSTAASAADPA CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11823852 [H]