| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721321
Identifier: 53721321
GI number: 53721321
Start: 382862
End: 383695
Strand: Reverse
Name: 53721321
Synonym: BPSS0286
Alternate gene names: NA
Gene position: 383695-382862 (Counterclockwise)
Preceding gene: 53721324
Following gene: 53721320
Centisome position: 12.09
GC content: 73.74
Gene sequence:
>834_bases ATGGAACACCGGTTCGTCCTGCTCGTATTGCTCTGCGCGCTGCTGCACGCGGTATGGAACGCGCTGCTGCACGCGAGCGA AGACCGCGTCGCGCAGCTCGGCACGATGTCGGTTCCGTATCTGCTCGCCGGCGCGGCCGGCGCGCTCGCGCTGCCGCCGC CGCCCGCGCCCGCGTGGCCGTACGTCGCGGCATCCGCGCTCCTCGAGCTCGGCTACTGCGCGGCGCTGCTGCGCGCGTAC CGCAGCGGCGATTTCAGCCGGATCTATCCGATCGCGCGCGGGCTGTCGCCGCTCACCGTCTGCGCGCTCGCGCTGATCGC GCTCGGCGAGCGGCCGACGCCGTTCGCGCTCGCCGGCATCGCGCTCGTGTCGCTCGGGATCGCGTCGCTCGCGCTCAGGC GCGGCCTGCGGTGGTCCGGCGAAAGCGTGCCCTACGCGCTCGTCACGGGCCTGTTCATCGCCGCGTACTCGGTCGTCGAC GGCCGTGGCGTGCGGCTCGCCGGCGATCCGCTCGCGTACGTCGCATGGGTGTACCTGCTATGGAACGCGCCGCAGTTCGC GCTGATCTGCCGGCTGCGCGGCTGGCGCGCGCTTGCGCGCTCGCGCGCCGCCGTCTCGCGCGGGCTCGCGGCCGGCGTGC TATCGCTCGCCGCATATGCGATCGCGATCGCCGCGTACCGGCATCTGCCGGTCGCCACCGTATCCGCGCTGCGCGAGACG AGCTCGATCTTCGCCATCGCGATCGGCTGGTTCGCGCTGCGCGAGCGGCCGAGCGCGCGCCGGCTCGCCGCGTGCGCGCT CGTCGTCGCGGGCGCGATGCTGATCCGGATGTGA
Upstream 100 bases:
>100_bases CGCCGACGCACGACATCCGGAACACGGCGGCAAGCGCTCGCTTCGCGATCGCGGCCCGCCGCCGCCCGCATGCCCCAATC ACGTTTTCCCGCCCGCCTCG
Downstream 100 bases:
>100_bases CGCGGCGCGGCGGCGCGCGGGCGGCACGTCGGAACTCGTGCCGGATGCCCGTCTCCGCGACGATCTGCGTGCGCGTGCTC GACGGATTCGCGATGCCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Integral Membrane; Transporter Dme Family; Transporter Permease Protein; Drug/Metabolite Transporter Superfamily Protein; Drug/Metabolite Transporter Superfamily Permease; Inner Membrane Protein; Transporter DME Family DMT Superfamily; Drug/Metabolite Exporter Family Protein; Transporter Of DMT Superfamily; DMT Family Permease
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MEHRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLTVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Sequences:
>Translated_277_residues MEHRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLTVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM >Mature_277_residues MEHRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWPYVAASALLELGYCAALLRAY RSGDFSRIYPIARGLSPLTVCALALIALGERPTPFALAGIALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVD GRGVRLAGDPLAYVAWVYLLWNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29352; Mature: 29352
Theoretical pI: Translated: 10.49; Mature: 10.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEHRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCH YVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLTVCALALIALGERPTPFALAGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH ALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRGVRLAGDPLAYVAWVYLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH WNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEHRFVLLVLLCALLHAVWNALLHASEDRVAQLGTMSVPYLLAGAAGALALPPPPAPAWP CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCH YVAASALLELGYCAALLRAYRSGDFSRIYPIARGLSPLTVCALALIALGERPTPFALAGI HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHH ALVSLGIASLALRRGLRWSGESVPYALVTGLFIAAYSVVDGRGVRLAGDPLAYVAWVYLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH WNAPQFALICRLRGWRALARSRAAVSRGLAAGVLSLAAYAIAIAAYRHLPVATVSALRET HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH SSIFAIAIGWFALRERPSARRLAACALVVAGAMLIRM HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA