| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is yycE [H]
Identifier: 53721265
GI number: 53721265
Start: 314442
End: 314834
Strand: Reverse
Name: yycE [H]
Synonym: BPSS0230
Alternate gene names: 53721265
Gene position: 314834-314442 (Counterclockwise)
Preceding gene: 53721266
Following gene: 53721264
Centisome position: 9.92
GC content: 67.18
Gene sequence:
>393_bases GTGATGAATCCTCCCGTTCTGCGCGTCGCCCGGCCGACCAACGATATCGACACGCTCGTGCGTTTCTACACGAAGGCGCT CGGCTTCGACGTCGTCGCCCGCTTCGAGAATCACGAAGGCTTCGACGGCGCGATCGTCGGCCGCGCCGGCTATCCGTGGC AAATCGAATTCACGCATCAGCACGGCGTGACGGTCGCGCGCGCACCGACCGCCGAGCATCTGCTCGTCTTTTATCTGCCC GATCGCGGCGCGTGGACCGAGGCCGTCGCGCGAATGCGCGCGTACGGCGCGACGCCGTGCCGCTCGGAGAATCCGTACTG GGACCGCGAAGGCGTGACGTTCGAGGACCCGGACGGCTACCGGATCGTCCTGCAGAACGCGCAGCCGGCCTGA
Upstream 100 bases:
>100_bases CACGGCGACGTTGCGCAGGGGCGCCGCCGCGTTTTCGGCCTATGCTGAAAACGCAGCTGCGCAACACCCCGTTCGTCGAC TCTTCGAAAACAGGAGTGCC
Downstream 100 bases:
>100_bases ACGCTCGCACGCGGCCGCGCCCGGACCGCGCGCGGCGGGTGGTGCGCGCGCGATGCGGCGCACAGCCGCGCGCCGGCAGC CGCCGCGTGCGGCGCGCGGC
Product: glyoxalase/bleomycin resistance protein/dioxygenase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA
Sequences:
>Translated_130_residues MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA >Mature_130_residues MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQHGVTVARAPTAEHLLVFYLP DRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGYRIVLQNAQPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 14710; Mature: 14710
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQ CCCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECC HGVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGY CCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE RIVLQNAQPA EEEEECCCCC >Mature Secondary Structure MMNPPVLRVARPTNDIDTLVRFYTKALGFDVVARFENHEGFDGAIVGRAGYPWQIEFTHQ CCCCCEEEEECCCCHHHHHHHHHHHHHCHHEEEEECCCCCCCEEEECCCCCCEEEEEECC HGVTVARAPTAEHLLVFYLPDRGAWTEAVARMRAYGATPCRSENPYWDREGVTFEDPDGY CCEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCE RIVLQNAQPA EEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1312531; 7584024; 9384377 [H]