| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721256
Identifier: 53721256
GI number: 53721256
Start: 297814
End: 298842
Strand: Reverse
Name: 53721256
Synonym: BPSS0221A
Alternate gene names: NA
Gene position: 298842-297814 (Counterclockwise)
Preceding gene: 53721258
Following gene: 53721253
Centisome position: 9.42
GC content: 69.68
Gene sequence:
>1029_bases GTGGCGAGCGAGCGCGGCAACGGCAACGGCAACGACACGACACGACACGGCAGCGATCACGATCTCACGAATCGAAACGG CCGGCAGTCGATGCGGACCGGTCAGCCCCGAGCCGAACGCCGGTCCGGTGCCGCCCCGATGGGCTTCCGTGCGCGACGGC GCATGCATGGATGCGATGGAATATTTGTTCGCGGCGCTCGCTCGCCGCGATTCGGCGCGCCGCCGGCACGATTGCGGCTC GCGATCGGCTTCGACGGCAGGACGTCGGTGTCACACCCGCCGCCGCGACAAGCTTCGGATCGCGATGAGCCTGCCGACGA AGTTCGCCGGCTCGGTTGCGCAATTCGTCGATATATCGGCGACGTTGACGCTCGGCGCTGGGCGCGGCATCGCCGCACCC GCATTTCTCGCGCGCCACGCGATCCCGCGATCGCGGCCGCGCCCGGCGTCCATCGCGGCGAAGCGGCAGCGCCGTCAGCG CAGCGGCGGGCGACGGTTCACGGTCGATGCCGCACGGGCCGCCGCAAGATCGCGCGCCGCCGGCCGCTCGACGGACGTCG GGTGACAGCGGGGCACGCACGAGCGGCAAGGCGAAACACTTCCGTCATCCGTCGACGCCAACGCAACGGGCGCGGTCGTG CAAGTGCGGCTCCGACGCCGCCGGGGGATCGGCCGGCATCACTTGCCGCCATCATGCCGGCCGATCGAGGCGGCTACGGC CATCGCCGTCGACTAGGCGCCACGCGCCATGCCCGGGCGCACGCTGGAAGCGCGATCCCGCCGCGCCACGCGCCAAGCCC CCGGCGGCGGCTGCGCCGCCGGCAACGATCAGCGGCGGATCAGGCCGACCTGCGAGACGTGCGACTTGCGCACCCGCTCC ACCTCGGCATGGCGGGCCTTGTACGAATAGTCGGCGTCGAGCGGCAGATGCGGCGACGTGAAAAGATCTTCAATCTTTTG AAGCAGCGCGAAGATGAGGCTCATTTGCGACTCCTGTCAGCTAACGTCCAGGGTTTTCCCTTAGAATGA
Upstream 100 bases:
>100_bases CCGACGTCGGGCGGATCAAACGCCGGCGATTCGCCTGCCGCATTCGATGCCGGCCTCGCGCGCGGGCGCCTGCGGCTCGA GTCGAACGGATGGAAAACGG
Downstream 100 bases:
>100_bases ATTCTAGGGGTTTTCCCTAAATCCAGCTAGTGCGTCGCAGCAAAAATCTTGCAAACCGCCCTTTGAGAGCCGTATTCGGA GCCGGCCCGTTGCGGCTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MASERGNGNGNDTTRHGSDHDLTNRNGRQSMRTGQPRAERRSGAAPMGFRARRRMHGCDGIFVRGARSPRFGAPPARLRL AIGFDGRTSVSHPPPRQASDRDEPADEVRRLGCAIRRYIGDVDARRWARHRRTRISRAPRDPAIAAAPGVHRGEAAAPSA QRRATVHGRCRTGRRKIARRRPLDGRRVTAGHARAARRNTSVIRRRQRNGRGRASAAPTPPGDRPASLAAIMPADRGGYG HRRRLGATRHARAHAGSAIPPRHAPSPRRRLRRRQRSAADQADLRDVRLAHPLHLGMAGLVRIVGVERQMRRREKIFNLL KQREDEAHLRLLSANVQGFPLE
Sequences:
>Translated_342_residues MASERGNGNGNDTTRHGSDHDLTNRNGRQSMRTGQPRAERRSGAAPMGFRARRRMHGCDGIFVRGARSPRFGAPPARLRL AIGFDGRTSVSHPPPRQASDRDEPADEVRRLGCAIRRYIGDVDARRWARHRRTRISRAPRDPAIAAAPGVHRGEAAAPSA QRRATVHGRCRTGRRKIARRRPLDGRRVTAGHARAARRNTSVIRRRQRNGRGRASAAPTPPGDRPASLAAIMPADRGGYG HRRRLGATRHARAHAGSAIPPRHAPSPRRRLRRRQRSAADQADLRDVRLAHPLHLGMAGLVRIVGVERQMRRREKIFNLL KQREDEAHLRLLSANVQGFPLE >Mature_341_residues ASERGNGNGNDTTRHGSDHDLTNRNGRQSMRTGQPRAERRSGAAPMGFRARRRMHGCDGIFVRGARSPRFGAPPARLRLA IGFDGRTSVSHPPPRQASDRDEPADEVRRLGCAIRRYIGDVDARRWARHRRTRISRAPRDPAIAAAPGVHRGEAAAPSAQ RRATVHGRCRTGRRKIARRRPLDGRRVTAGHARAARRNTSVIRRRQRNGRGRASAAPTPPGDRPASLAAIMPADRGGYGH RRRLGATRHARAHAGSAIPPRHAPSPRRRLRRRQRSAADQADLRDVRLAHPLHLGMAGLVRIVGVERQMRRREKIFNLLK QREDEAHLRLLSANVQGFPLE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38122; Mature: 37991
Theoretical pI: Translated: 12.60; Mature: 12.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASERGNGNGNDTTRHGSDHDLTNRNGRQSMRTGQPRAERRSGAAPMGFRARRRMHGCDG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCC IFVRGARSPRFGAPPARLRLAIGFDGRTSVSHPPPRQASDRDEPADEVRRLGCAIRRYIG EEEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC DVDARRWARHRRTRISRAPRDPAIAAAPGVHRGEAAAPSAQRRATVHGRCRTGRRKIARR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RPLDGRRVTAGHARAARRNTSVIRRRQRNGRGRASAAPTPPGDRPASLAAIMPADRGGYG CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC HRRRLGATRHARAHAGSAIPPRHAPSPRRRLRRRQRSAADQADLRDVRLAHPLHLGMAGL HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRIVGVERQMRRREKIFNLLKQREDEAHLRLLSANVQGFPLE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure ASERGNGNGNDTTRHGSDHDLTNRNGRQSMRTGQPRAERRSGAAPMGFRARRRMHGCDG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHCCCCCCCHHHHHHHCCCCC IFVRGARSPRFGAPPARLRLAIGFDGRTSVSHPPPRQASDRDEPADEVRRLGCAIRRYIG EEEECCCCCCCCCCHHHEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHC DVDARRWARHRRTRISRAPRDPAIAAAPGVHRGEAAAPSAQRRATVHGRCRTGRRKIARR CHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH RPLDGRRVTAGHARAARRNTSVIRRRQRNGRGRASAAPTPPGDRPASLAAIMPADRGGYG CCCCCCEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC HRRRLGATRHARAHAGSAIPPRHAPSPRRRLRRRQRSAADQADLRDVRLAHPLHLGMAGL HHHHHCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VRIVGVERQMRRREKIFNLLKQREDEAHLRLLSANVQGFPLE HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA