| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721227
Identifier: 53721227
GI number: 53721227
Start: 256752
End: 257597
Strand: Reverse
Name: 53721227
Synonym: BPSS0192
Alternate gene names: NA
Gene position: 257597-256752 (Counterclockwise)
Preceding gene: 53721228
Following gene: 53721226
Centisome position: 8.12
GC content: 69.39
Gene sequence:
>846_bases GTGTCGAACGCGCCCGCGCCCCGCACGCTGACCGTGCCCCCCCTGCCGCCGCTGACCGAGGCGGAATCGGCCGACGTGAC GCGCCGCGCGCTCGCGCTGCGCGCGGCGTTCGCGCAGGACGTCGCACGGCGCCTGAACGTGCCCGACGCCGAACAGCGCG CGTACGGCGAACGCCTGCAGCAGACGCTCGACGCGAACGGCCTGGGCGAGCTCGCGCGCGAATACGTCGTGCTCGTCGAT CGCGCACCGAACGTGCAGGCAGTCTTTCTCTACTTTCGCACGACGCGCAGCAACGCGTGGCAGATGATCGGCGCATCGCC CGTCGCAACCGGCCTGCCCGGCCAGTACGATCACTTCGTCACGCCGCTCGGCGTGTTCGAGCACACGCCGGAGAACATGG ATTTCCGCGCGGAAGGCACGACCAACGACAACGGCATCCGCGGCTACGGCCAGCGCGACATGCGCATCTACGATTTCGGC TGGACCGATGCGGAGCGCGGCTGGGGCAAGGGCGGCGTCTCGCAGATGCGCTTCCAGATGCACGCGACCGATCCCGAGTA CCTCGAACCGCTGCTCGGCATCCGCCATTCGAAGGGATGCGTGCGGATTCCGGCTTCGCTGAACGTTTTCCTCGATCAGC ACGGAATCCTCGACGCCGAATACGAAGCGCGCGCGGCAGGCGGCGATCCGCCGTGGGTATTGCGCGCGCACCGGCAAGTC ACGCCGTGGGCGGGCCGCTATCTCGTCGTCATCGATTCGCAGCGCAAGACGCGCCCCGCATGGTCGCCCGCGCCGGGCAA GAAGGCGCAGGCGAAGCTGCCGAAGGGCGGCGACACGGCGGATTGA
Upstream 100 bases:
>100_bases GTCCGCCCCCGCGGCGCCATCGCGCGGCGCATCGCCCAAGCCGGGCAGCGCGGCGAGCGCGCTCGCCTCGCCGGCATCCG CCGCATCCGCGCCGTCGCCC
Downstream 100 bases:
>100_bases GCGTGCGTGCTTCGATGGGAGGGAGTGCAGGCGGTGCGGGTGACGTGGTTGACGTGGTTGACGTGGTTGACGTGGGTAGC GTGGTTGACGTGGGTAGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVD RAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFG WTDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV TPWAGRYLVVIDSQRKTRPAWSPAPGKKAQAKLPKGGDTAD
Sequences:
>Translated_281_residues MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVD RAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFG WTDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV TPWAGRYLVVIDSQRKTRPAWSPAPGKKAQAKLPKGGDTAD >Mature_280_residues SNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQQTLDANGLGELAREYVVLVDR APNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFVTPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGW TDAERGWGKGGVSQMRFQMHATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQVT PWAGRYLVVIDSQRKTRPAWSPAPGKKAQAKLPKGGDTAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31060; Mature: 30929
Theoretical pI: Translated: 8.42; Mature: 8.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQ CCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFV HHHCCCCHHHHHHHEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHC TPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWGKGGVSQMRFQM CCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEE HATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV ECCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCC TPWAGRYLVVIDSQRKTRPAWSPAPGKKAQAKLPKGGDTAD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SNAPAPRTLTVPPLPPLTEAESADVTRRALALRAAFAQDVARRLNVPDAEQRAYGERLQ CCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH QTLDANGLGELAREYVVLVDRAPNVQAVFLYFRTTRSNAWQMIGASPVATGLPGQYDHFV HHHCCCCHHHHHHHEEEEEECCCCCEEEEEEEEECCCCCEEEECCCCCCCCCCCCCHHHC TPLGVFEHTPENMDFRAEGTTNDNGIRGYGQRDMRIYDFGWTDAERGWGKGGVSQMRFQM CCCHHHHCCCCCCCEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHEEEEE HATDPEYLEPLLGIRHSKGCVRIPASLNVFLDQHGILDAEYEARAAGGDPPWVLRAHRQV ECCCHHHHHHHHCCCCCCCEEECCCCEEEEEECCCCCCCCCHHCCCCCCCCEEEEECCCC TPWAGRYLVVIDSQRKTRPAWSPAPGKKAQAKLPKGGDTAD CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA