Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is yueD [H]

Identifier: 53721192

GI number: 53721192

Start: 203913

End: 204674

Strand: Reverse

Name: yueD [H]

Synonym: BPSS0156

Alternate gene names: 53721192

Gene position: 204674-203913 (Counterclockwise)

Preceding gene: 53721202

Following gene: 53721191

Centisome position: 6.45

GC content: 71.39

Gene sequence:

>762_bases
ATGACCACTTCCCCTTCTCCATTGCCCGCCGTTCGCGCGATCGTCACCGGTCACACGCGCGGGCTCGGCGAGGCGCTTGC
CGAGCAGTTGCTGCGGCGGGACATCGCCGTGCTCGGTCTGTCGCGCGGCCGCCATCCGTCGCTCGCCTCGCACGCGCCAG
AGCGCCTCGTCGAGGCCGAGCTGGATCTGTCGGAGCCGGCGCGCGTTCAAGCGTGGCTCGGCGGCGACACGCTCGGCGCA
TTCGTCGCCGGCGCGAGCCGCGTGCTGCTGTTCAACAACGCGGGCACCGTCGAGCCGATCGGCCCGCTCGATACGCAGGA
CACGGCGGCGATCGCACGCGCGGTCGGCCTGAACGTCGCGACGCCGCTGATGCTCGCGAGCGCGCTCGCGAAGCTCGCGC
CGGATGCGCTCGAGCGCCGCATCGCGCACATCTCGAGCGGCGCGGCGCGCAACGCGTATGCGGGCTGGAGCGTCTATTGC
GCGACCAAGGCCGCGCTCGATCACCACGCTCGGGCGGTCGCGCTGGATGCGAACCGCGCGCTGCGGATCTGCAGCGTCGC
GCCCGGCGTCGTGGATACCGGCATGCAGGCGACGATCCGCGCGACGAGCGACGAGCGGCTTCCCTCGCGCGAGCGGTTCG
CGCGACTGAAGTCGAGCGGCGCGCTGTCGACGCCCGACGATGCCGCGCGTCAATTGATCGATTATGTGCTGAGCGACGAT
TTCGGCTCGACGCCGACCGCCGACATTCGCCATCTGGGGTGA

Upstream 100 bases:

>100_bases
GCGACGGCCGGCCGCGCGACGCGTGAATCGGCCGCCGGGCTTCGCCGGATGCCGCGCCGCGCGCGTCACGCATCCCGTTT
CCATCACTTTGCGCATCGAC

Downstream 100 bases:

>100_bases
GCCGCGGCGCGCGGCGACGAAGCGCCGGCGTCGAACCGCGCGCGCTCGAACGGATTCGGCGACGGCGCGCCCGACAGTCG
CGAGGCGCGCGCCGCGCGAT

Product: short chain dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTTSPSPLPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGA
FVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYC
ATKAALDHHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFARLKSSGALSTPDDAARQLIDYVLSDD
FGSTPTADIRHLG

Sequences:

>Translated_253_residues
MTTSPSPLPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGA
FVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYC
ATKAALDHHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFARLKSSGALSTPDDAARQLIDYVLSDD
FGSTPTADIRHLG
>Mature_252_residues
TTSPSPLPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAELDLSEPARVQAWLGGDTLGAF
VAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVATPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCA
TKAALDHHARAVALDANRALRICSVAPGVVDTGMQATIRATSDERLPSRERFARLKSSGALSTPDDAARQLIDYVLSDDF
GSTPTADIRHLG

Specific function: Reduces benzil stereospecifically to (S)-benzoin. Can also reduces 1-phenyl-1,2-propanedione, 1,4-naphthoquinone, 1-(4- methyl-phenyl)-2-phenyl-ethane-1,2-dione, 1-(4-fluoro-phenyl)-2- phenyl-ethane-1,2-dione, methyl benzoylformate, p- nitrobenzaldehyde i

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI4507185, Length=200, Percent_Identity=33.5, Blast_Score=89, Evalue=3e-18,
Organism=Saccharomyces cerevisiae, GI6322226, Length=193, Percent_Identity=29.5336787564767, Blast_Score=79, Evalue=9e-16,
Organism=Saccharomyces cerevisiae, GI6322227, Length=244, Percent_Identity=28.6885245901639, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26489; Mature: 26358

Theoretical pI: Translated: 7.71; Mature: 7.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSPSPLPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAE
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDLSEPARVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVA
CCCCCCCEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHH
TPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRA
HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCC
LRICSVAPGVVDTGMQATIRATSDERLPSRERFARLKSSGALSTPDDAARQLIDYVLSDD
EEEECCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
FGSTPTADIRHLG
CCCCCCCHHCCCC
>Mature Secondary Structure 
TTSPSPLPAVRAIVTGHTRGLGEALAEQLLRRDIAVLGLSRGRHPSLASHAPERLVEAE
CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LDLSEPARVQAWLGGDTLGAFVAGASRVLLFNNAGTVEPIGPLDTQDTAAIARAVGLNVA
CCCCCCCEEEEEECCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCHH
TPLMLASALAKLAPDALERRIAHISSGAARNAYAGWSVYCATKAALDHHARAVALDANRA
HHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHEEEEECCCCC
LRICSVAPGVVDTGMQATIRATSDERLPSRERFARLKSSGALSTPDDAARQLIDYVLSDD
EEEECCCCCHHHCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
FGSTPTADIRHLG
CCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases; Acting on the CH-OH group of donors; With NAD or NADP as acceptor [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11745140; 11796169 [H]