| Definition | Burkholderia pseudomallei K96243 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_006351 |
| Length | 3,173,005 |
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The map label for this gene is 53721151
Identifier: 53721151
GI number: 53721151
Start: 142788
End: 143843
Strand: Reverse
Name: 53721151
Synonym: BPSS0115
Alternate gene names: NA
Gene position: 143843-142788 (Counterclockwise)
Preceding gene: 53721153
Following gene: 53721150
Centisome position: 4.53
GC content: 64.39
Gene sequence:
>1056_bases ATGTCGAAAAACGGTTCACCACTGAAATCGGATCGCTCGCGACATGCATCCGCACATCACGAAGCACCGGATGTGCCGAC GCCTCTCGTCTCGCTCGCACGCTATGAAGGCCGCGACGCCTCGCCGCCACGGCAACACGCGATTGGCGCGGCCGGTTGCG TCTATTTCGTGCAGGCGAACCGATTCGAGGCATGGGATGCACGCATCGGCATCCCGAACGACGGCATCATATTCGCAGCC GAGCCCGACGGCTCGCTCCGGATGGAAAACCATTGCGCTCGAGCTGACTGCCGCGTCAACGGCGAAGCCGTCGCACCCGG TGCTTGCCGGCATCTCGAACGCGGCGACGTCATCGCCGTCGCCGCCGCCGAGTTGACCATTCAAGACGGCGCGAGCGCGC GCGAGCCATCCGCGCCTCGGCAGCCGCCGGTCGATCTGATTGCGCTCGGCAATGCGTTGCCGCGAAGCGAACCGGCGCAT TTCGCGGATCTCGCCGAATTGGCCAATCTGCCCGCGGCGGCACATCCGCATGGCCGCGCATCGGCGGGCGCCGCCGCGCC GCTTGTCATTCTCGACGAAGAGGCGCTCAGCGACGCGGCGCCGCCCGCGTTCGATTCGACGAATCACGATCCATTGGCGC ATTTGCTGACCGAATACCGGCGCGCGCTGATCCATCAAGAGCGCTCGTATGCCCATGCACTCAAGTCGATCGAGCGCCCC CAAATTGCCGTCCCGCTTCCCGACGACCCATTTCTGGACGCGCCGGGCCGCTACCGGCGGGGGTCGTTGCTGGGCGACCT GCTGGGCAGTCGGCAGAACATCGACTACGTGCTGGACGAAATGAATCCGTTTCGCGCCGAAGCGCTGTTTGCCGACGAAG CGCGTCACGACGTGCTGCTTCTGCTCGCGCCACGACGAAGAAAGAAGGCACATTTCCCGCAAACGGCGCTGCTTGCCAGG CACGAGCATCACTTGATGAGCGTGGACAGTCACTTCCCGACGCTCGGCGCCGAAACGGACATCCAACAGGAAGAACCGAA TGACGAATCGATCTGA
Upstream 100 bases:
>100_bases GGCGTGTTTCGCTTGATACCCCGGATCGCGCATCCCGCATGAATCGAATGCGCGCCGACAAGCCGCCAAACGGACAACTC GCGCTCGCCGCTCAATCGTC
Downstream 100 bases:
>100_bases ATCTCCGCAACCCTCCGATCCGCGTGACGCCATGCTGCGCGACGCGCTGCGCGCCCAGTCTTTCGAGGAAATCAAGGCGC GCACGGCCGAGGCGGTCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 351; Mature: 350
Protein sequence:
>351_residues MSKNGSPLKSDRSRHASAHHEAPDVPTPLVSLARYEGRDASPPRQHAIGAAGCVYFVQANRFEAWDARIGIPNDGIIFAA EPDGSLRMENHCARADCRVNGEAVAPGACRHLERGDVIAVAAAELTIQDGASAREPSAPRQPPVDLIALGNALPRSEPAH FADLAELANLPAAAHPHGRASAGAAAPLVILDEEALSDAAPPAFDSTNHDPLAHLLTEYRRALIHQERSYAHALKSIERP QIAVPLPDDPFLDAPGRYRRGSLLGDLLGSRQNIDYVLDEMNPFRAEALFADEARHDVLLLLAPRRRKKAHFPQTALLAR HEHHLMSVDSHFPTLGAETDIQQEEPNDESI
Sequences:
>Translated_351_residues MSKNGSPLKSDRSRHASAHHEAPDVPTPLVSLARYEGRDASPPRQHAIGAAGCVYFVQANRFEAWDARIGIPNDGIIFAA EPDGSLRMENHCARADCRVNGEAVAPGACRHLERGDVIAVAAAELTIQDGASAREPSAPRQPPVDLIALGNALPRSEPAH FADLAELANLPAAAHPHGRASAGAAAPLVILDEEALSDAAPPAFDSTNHDPLAHLLTEYRRALIHQERSYAHALKSIERP QIAVPLPDDPFLDAPGRYRRGSLLGDLLGSRQNIDYVLDEMNPFRAEALFADEARHDVLLLLAPRRRKKAHFPQTALLAR HEHHLMSVDSHFPTLGAETDIQQEEPNDESI >Mature_350_residues SKNGSPLKSDRSRHASAHHEAPDVPTPLVSLARYEGRDASPPRQHAIGAAGCVYFVQANRFEAWDARIGIPNDGIIFAAE PDGSLRMENHCARADCRVNGEAVAPGACRHLERGDVIAVAAAELTIQDGASAREPSAPRQPPVDLIALGNALPRSEPAHF ADLAELANLPAAAHPHGRASAGAAAPLVILDEEALSDAAPPAFDSTNHDPLAHLLTEYRRALIHQERSYAHALKSIERPQ IAVPLPDDPFLDAPGRYRRGSLLGDLLGSRQNIDYVLDEMNPFRAEALFADEARHDVLLLLAPRRRKKAHFPQTALLARH EHHLMSVDSHFPTLGAETDIQQEEPNDESI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38065; Mature: 37934
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKNGSPLKSDRSRHASAHHEAPDVPTPLVSLARYEGRDASPPRQHAIGAAGCVYFVQAN CCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECC RFEAWDARIGIPNDGIIFAAEPDGSLRMENHCARADCRVNGEAVAPGACRHLERGDVIAV CEEECCCEECCCCCCEEEEECCCCCCEECCCCCCCCCEECCCEECCHHHHHCCCCCEEEE AAAELTIQDGASAREPSAPRQPPVDLIALGNALPRSEPAHFADLAELANLPAAAHPHGRA EEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC SAGAAAPLVILDEEALSDAAPPAFDSTNHDPLAHLLTEYRRALIHQERSYAHALKSIERP CCCCCCCEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QIAVPLPDDPFLDAPGRYRRGSLLGDLLGSRQNIDYVLDEMNPFRAEALFADEARHDVLL EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEE LLAPRRRKKAHFPQTALLARHEHHLMSVDSHFPTLGAETDIQQEEPNDESI EECCCHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SKNGSPLKSDRSRHASAHHEAPDVPTPLVSLARYEGRDASPPRQHAIGAAGCVYFVQAN CCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCCCEEEEEECC RFEAWDARIGIPNDGIIFAAEPDGSLRMENHCARADCRVNGEAVAPGACRHLERGDVIAV CEEECCCEECCCCCCEEEEECCCCCCEECCCCCCCCCEECCCEECCHHHHHCCCCCEEEE AAAELTIQDGASAREPSAPRQPPVDLIALGNALPRSEPAHFADLAELANLPAAAHPHGRA EEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC SAGAAAPLVILDEEALSDAAPPAFDSTNHDPLAHLLTEYRRALIHQERSYAHALKSIERP CCCCCCCEEEECHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC QIAVPLPDDPFLDAPGRYRRGSLLGDLLGSRQNIDYVLDEMNPFRAEALFADEARHDVLL EEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHCCCCCCEEE LLAPRRRKKAHFPQTALLARHEHHLMSVDSHFPTLGAETDIQQEEPNDESI EECCCHHHHCCCCHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA