Definition Burkholderia pseudomallei K96243 chromosome 2, complete sequence.
Accession NC_006351
Length 3,173,005

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The map label for this gene is 229269503

Identifier: 229269503

GI number: 229269503

Start: 469303

End: 470583

Strand: Reverse

Name: 229269503

Synonym: BPSS0338

Alternate gene names: NA

Gene position: 470583-469303 (Counterclockwise)

Preceding gene: 53721374

Following gene: 53721372

Centisome position: 14.83

GC content: 64.09

Gene sequence:

>1281_bases
ATGCCGAGACTTGCCACCGTTGTTGCAGGCCGATCCGTTCACTCTGCACAAACCGCGATGCAAGAAGCCACACAACATGA
CGCCGTCGATGTCTTCGTCGGCGTCGACGTCGATGTCGGCGTCGACGTCGGTAAAGGCCAGCATCACGCCGTCGCACTCG
ATCGAAACGGCAAGCGTCTTTACAACAAGGCACTCCCCAACGACGAGGTCAAGCTGCGCGCCCTCATCGCCGAACTCAAG
ACTCACCGTCGACTGCTGTTCGTCGTCGATCAGCCTTCCACCATCGGTGCGCTTCCTGTAGCCGTCGCCCGCGCTGAAGG
CGTACTCGTCGCCTATCTGCCCGGACTGGCCATGCGCCGCATCGCTGATTTGCATGCCGGCGAAGCCAAGACCGATGCCC
GCGACGCCGCGATCATTGCTGAAGCCGCCCGCTCGATGCCACATACGCTGCGCTCGCTTCGACTGGCCGACGAGCAGCTC
GCCGAACTCACCATGCTCCGCGGCTTCGATGACGACCTCGCCGCTCAGCTCACGCAAACCAGCAACCGCATTCGCGGCCT
GCTTACTCAAATCCATCCGGCGCTCGAACGCGTTCTCGGACCGCGCCTCGACCATCCGGCGGTGCTCGATCTGCTTGAGC
GCTACCCGTCCCCGAGCGCACTGGCTGCTGCCAATGAAAAGACGCTCGCCAACCGCCTGACCAAGCTCGCACCGCGCATG
GGCAAGAACTGGGCGGCCGAAATCGTTCAAGCGCTGAACGAGCAAGCCGTGATCGTGCCCGGCACGCAGGCCGCCACCAT
CGTCATGCCTCGTTTGGCCCAGCAACTTGCCGCCTTGCGCAAGCAGCGTGACGAAATCGCTGCCGAAGTTGAGCGGCTGG
TGCTTGCTCACCCTTTTTGGCCGGTCCTGACCAGCATGCCGGGAGTCGGCGTCAGGACCGCTGCCAGACGCCTGACCGAA
GCCGCCCAAAAAGCCTTCGCCACGGCCGCTCATCTGGCGGCCTACGCTGGCCTCGCGCCGGTCACCCGGCGCTCAGGCTC
GTCGATCCGGGGTGAACACCCGTCCAGACGGGGCAACAAGGTGCTCAAACGCGCCTTGTTCCTCTCCGCCTTCGCTGCCT
TACGAGACCCAGTCTCACGGGCCTATTCCTCGCGCAAGATCCAGCAGGGCAAGCGCCACAACCAAGCACTCATCGCGCTC
GCACGGCGACGCTGCGACGTCCTGTTTGCCATGCTGCGCGACGGCACCATTTACCCACCCAAGTCAGCCCCTGACGCTTG
A

Upstream 100 bases:

>100_bases
GCAGCGCAGGGGGTAAGCGCGGCGGGCGGTGGACGGCAAGCAGCGGGCGACGGCGGCGACAGTAGTCGTCGTCGGGCGTT
GGGCGCCGTCCGTAACGTGG

Downstream 100 bases:

>100_bases
CGAAAGACGTAGGGGCACCCGCGCGTGCTGTGCCGCAACATCGCCGCGCGGCGCCGCGCCCTTGCGCCGGATGCGATCCC
GCCCCGATGTAGCGCGCGCC

Product: insertion element protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MPRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRLYNKALPNDEVKLRALIAELK
THRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQL
AELTMLRGFDDDLAAQLTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRM
GKNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFWPVLTSMPGVGVRTAARRLTE
AAQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIAL
ARRRCDVLFAMLRDGTIYPPKSAPDA

Sequences:

>Translated_426_residues
MPRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRLYNKALPNDEVKLRALIAELK
THRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQL
AELTMLRGFDDDLAAQLTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRM
GKNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFWPVLTSMPGVGVRTAARRLTE
AAQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIAL
ARRRCDVLFAMLRDGTIYPPKSAPDA
>Mature_425_residues
PRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRLYNKALPNDEVKLRALIAELKT
HRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLA
ELTMLRGFDDDLAAQLTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRMG
KNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFWPVLTSMPGVGVRTAARRLTEA
AQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIALA
RRRCDVLFAMLRDGTIYPPKSAPDA

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 46190; Mature: 46059

Theoretical pI: Translated: 11.04; Mature: 11.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRL
CCCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCEEEEEECCCHHH
YNKALPNDEVKLRALIAELKTHRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRR
HHHCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHH
IADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLRGFDDDLAAQLTQT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH
GKNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFW
CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
PVLTSMPGVGVRTAARRLTEAAQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHH
VLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIALARRRCDVLFAMLRDGTIYPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KSAPDA
CCCCCC
>Mature Secondary Structure 
PRLATVVAGRSVHSAQTAMQEATQHDAVDVFVGVDVDVGVDVGKGQHHAVALDRNGKRL
CCHHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCCCCCCEEEEEECCCHHH
YNKALPNDEVKLRALIAELKTHRRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRR
HHHCCCCCHHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHH
IADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLRGFDDDLAAQLTQT
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
SNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPSALAAANEKTLANRLTKLAPRM
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHH
GKNWAAEIVQALNEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEIAAEVERLVLAHPFW
CCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
PVLTSMPGVGVRTAARRLTEAAQKAFATAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNK
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHH
VLKRALFLSAFAALRDPVSRAYSSRKIQQGKRHNQALIALARRRCDVLFAMLRDGTIYPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KSAPDA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2821490; 12000953 [H]