| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
Click here to switch to the map view.
The map label for this gene is 53720974
Identifier: 53720974
GI number: 53720974
Start: 3992221
End: 3993402
Strand: Reverse
Name: 53720974
Synonym: BPSL3365
Alternate gene names: NA
Gene position: 3993402-3992221 (Counterclockwise)
Preceding gene: 53720977
Following gene: 53720964
Centisome position: 98.01
GC content: 68.1
Gene sequence:
>1182_bases ATGACCAAGAAACGGGCCTATACCAGCAAGACGGGGAATCAGACAGTGACGGCGCAGGCCGTCCTGAAAGAGCGTAACCG CTTCTACGGCGGGGCGCCGACGGGCAAGTCGTACTACAGCATGCACCCCGCGGGCGAGCGAAAGGACGTCGTGCACGTGC GCAAGGGGAGCGGCTATTTCGCGTACAAGCGCGGCGACGCCGGTCACGGCGGCGCGGCCGAAGGCGAATCGCTGAACCAT ATCCTGTTCAAGGAAGCGCTCTGCAGCGTGTCGCACACGAAGCTCGTGTTGTACAGGCAGACGCCCGGCGCGCCGGCATT GTGGCGCCGCAAGGTGCCGATCACCGTGCAGGCCGCCCGAGCCGAAGAGCCGGTGCCGAGGCGCGACGGCCCGCCTTATC GCGCGGACGTCTACCTGGAGTTCGCCACGGACGACGATCTCGGCCTGAAGTGGCAGCGGAGAGTCTATATCGAGATCAGG CATGCACACGCGGTCGACGCGCGCAAGCAGGACGAATTGCGTACGCTGGGCATCCCGGTGGTCGAGGTGGACATCAATTA TCCGGCATACATGTATCCGTTCAGCGACGACGAAACGACCGACGAACGAGAAGACGCGCATCGCAAGCGGCTCAAGCACA TGCTCGAGCATGAAAACGGATTCCTGCAAGGTGTCGTGTTGAGCAATCCATCATCGAACGAATATTTGCAGAAGCTCGTC GGCGAGCAGCGGCGCAAGCTCGACTCGCAACAAGCCGAGCTCGATCGGCTCGCCGCAGGCATCGCCGAGCGTGACGGCCG GTTGGCTGCGGCGGCCGAGGCGAAATTGCAGAGTGACCAACGGTGCCGGGATGCGCGGGCGGCGCTCGAGCGGGTGAGCG AGCAGTTGAGCGCGGTCTCCGACGAGCGCACGCGGGCGCTGCGCAAGCAGCAGGCACTGGCGGAACAACTGGCGCGCGTG CGGGCCGGGCGGCGCGTCGCCTACGGAGGATGCGCGGCCCTCGTCGCGCTGGCGGCCGTGCTCGGCTATGCGCACTGGCA ACGGCCGCCGGCGCTGTCCGCCGCCCGGCCCGCGCCGTTGGCGCAAGCGCCGGCCGCGGCCGCCGGGGGTGCGCAGCGCG CGACCGGGCGCGCGGCGGCGTCGCCGAAACACCGAAGCCGCCCGCGCGCGAACGGCGGCTGA
Upstream 100 bases:
>100_bases GACAGAAAGTGACTGAGAGAGGCGATGCGGGCGGCGCGACACGCGTCGAGGCCGCGCGTCGCGACGGCCGCCGAGCCGGT GCGGGCAGGCGAGGGACGGC
Downstream 100 bases:
>100_bases AGGCCGCGGCGCAACGGCGCGCGGCCTTTTCGCGTCAGCACTCGACGATATTCACCGCGAGCCCGCCGCGCGAGGTCTCC TTGTACTTCGTCTTCATGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MTKKRAYTSKTGNQTVTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNH ILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIR HAHAVDARKQDELRTLGIPVVEVDINYPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLV GEQRRKLDSQQAELDRLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARV RAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRANGG
Sequences:
>Translated_393_residues MTKKRAYTSKTGNQTVTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNH ILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIR HAHAVDARKQDELRTLGIPVVEVDINYPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLV GEQRRKLDSQQAELDRLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARV RAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRANGG >Mature_392_residues TKKRAYTSKTGNQTVTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYFAYKRGDAGHGGAAEGESLNHI LFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAARAEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRH AHAVDARKQDELRTLGIPVVEVDINYPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLVG EQRRKLDSQQAELDRLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVSDERTRALRKQQALAEQLARVR AGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPLAQAPAAAAGGAQRATGRAAASPKHRSRPRANGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43299; Mature: 43168
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKKRAYTSKTGNQTVTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYF CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEE AYKRGDAGHGGAAEGESLNHILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAAR EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCEEEEECC AEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRTLGIPV CCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCHHHCCHHHHHHHHHCCEE VEVDINYPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLV EEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH GEQRRKLDSQQAELDRLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERTRALRKQQALAEQLARVRAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPL HHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AQAPAAAAGGAQRATGRAAASPKHRSRPRANGG CCCCCHHCCCCHHCCCCCCCCCCHHCCCCCCCC >Mature Secondary Structure TKKRAYTSKTGNQTVTAQAVLKERNRFYGGAPTGKSYYSMHPAGERKDVVHVRKGSGYF CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCCCEEEEECCCCEE AYKRGDAGHGGAAEGESLNHILFKEALCSVSHTKLVLYRQTPGAPALWRRKVPITVQAAR EEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHCCCCEEEEECC AEEPVPRRDGPPYRADVYLEFATDDDLGLKWQRRVYIEIRHAHAVDARKQDELRTLGIPV CCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEEEECCHHHCCHHHHHHHHHCCEE VEVDINYPAYMYPFSDDETTDEREDAHRKRLKHMLEHENGFLQGVVLSNPSSNEYLQKLV EEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH GEQRRKLDSQQAELDRLAAGIAERDGRLAAAAEAKLQSDQRCRDARAALERVSEQLSAVS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DERTRALRKQQALAEQLARVRAGRRVAYGGCAALVALAAVLGYAHWQRPPALSAARPAPL HHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC AQAPAAAAGGAQRATGRAAASPKHRSRPRANGG CCCCCHHCCCCHHCCCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA