| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720952
Identifier: 53720952
GI number: 53720952
Start: 3964455
End: 3966017
Strand: Reverse
Name: 53720952
Synonym: BPSL3342
Alternate gene names: NA
Gene position: 3966017-3964455 (Counterclockwise)
Preceding gene: 53720953
Following gene: 53720951
Centisome position: 97.34
GC content: 47.98
Gene sequence:
>1563_bases GTGACCATGAAATATCGCGAAAGTCAGGTTGACAAAGAGCTTAGGCAATGGTTTGCGAAAGACATGTCAAAAGCGTTGTT GCGACGCATTATGCTTATCAGGGGCAGTTTGCGCGGAATAAATTCGCTGGATATATCTTTTACATATCCGATAACCGCCT TTGCTGGAATTAACGGGGCTGGGAAGTCGACCATTCTGGCGCTTGCTTGTTGCGCGTATCACGCCAATAAAAATGGATTT AAGTTGCCTCGTCGAAAAAATCCATATTACACATTTTCTGATTTTTTTATTCGACACAAGGAAGAGGCGGAGCCGGATGG GATCGAGATCAGCTATGCGATCGCCTACAACAATTGGAAGAAGACGGATTCTTTTCCGAATGGAGAGGGGGTTGCATATC AAAGGAGAAAGAAAAATAAGGGCGGTAAATGGAACGATTATCAGGCGAGAGTTAGGAAGACGGTTGTCTTTCTCGGGATC GAGCGCATCGTTCCCCATAGTGAGCGAAGCCAGTCGCGTTCTTATTCCAGAGCATTTGCTGATACAGTTCCCAAAGGATG GGAAGATAAGGTGCGTGAGGCGGTCGGGTTCATTCTGAGTAAGAAATATGATGACCTGCGATACCTGGAATATTCGCGAT ACAGGTTGCCGATTGTAAAGATCGGTGACCTTGTGTATTCGGGATTCAATATGGGGGCTGGCGAGAATGCATTGTTCGAA ATATTTTCGACAATTTATTCCTGCGGTGAGCAAGCTTTGCTTGTGCTGGATGAAATAGAGCTTGGATTGCACGTTAAAGC GCAGAAGCTTTTCATGAAGAAACTGAAGGAGGTCTGCAATGAAACTGGAACTCAAGTGATTTGCACGACGCACTCTCGAG AAATTTTCGAATGCTTGCCGGATGATGCGAGATATTTTGTGGAAACCATCGGCGGTAAGACAAGACTGATTGGCGGGATT TCGCCGGAATTCGCATTTGCGAAAATGGGGGCGCCGGGTGGAAACGAACTCGATATCTTCGTTGAAGATGATGTTGCAAG ATCTATCTTGCAAGCGATACTTCCTGCCAGTATTCGGACGCGAGTGACAATCAAAGTAATTGGTTCGGCAACGGCAATTG CTCGGCAACTTGCGGCGCATTATGTCAGAAAAGATCAAAAACCAACGTTGGCGATTTTTGACGGAGATCAGCGCGCCAAG GACGCGGACAATTTAGGTCATGCAAAGAAAATGGCCGAAAATGCCGGTGCGGAATTTGATGCGTGGTACAAGGAACACGT TGGATATCTGCCGGGGGAAACGTGGCCGGAAGCTTGGCTCGTTCAGAAGGCTATCGAGGCCAAGATGTCAACCGCTGTCG CGTTAGCGGTGGAGCCGGATGCAGTCACGGGAGTGTTGGAATACGCTCTGCAGGCAGGGAAGCACAACGAGTTCTACGAG ATTGCGAAAAATGTGGGTTTGGATAAGCAGCAATGTCTTGAACGACTATCGGCAGCCGTTTGTGCATCCTTTCCCGGCGA TTTCGCGGCACTGCTCAAGCTGGTAGCGGATCAATTGAGATGA
Upstream 100 bases:
>100_bases TTGTGATTTCGTTCGCTTGACTAGAGCGGCGCTCAGGCTGAAGAAATGAACTGGCGATAAAGTATCGATGGAGTAGAAGC AAGAAGAATTAGACGACGGG
Downstream 100 bases:
>100_bases CGTTTTCAAAAGCGGATCTTAACTGTGAAGCGACGGAGACGGTCTTTTTGAGCAAATAGCGCATGAAATGTATTCTCCAC TGCCCTCCGAAGGCAGGGGT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: ATPase; Bacteriophage Protein
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MTMKYRESQVDKELRQWFAKDMSKALLRRIMLIRGSLRGINSLDISFTYPITAFAGINGAGKSTILALACCAYHANKNGF KLPRRKNPYYTFSDFFIRHKEEAEPDGIEISYAIAYNNWKKTDSFPNGEGVAYQRRKKNKGGKWNDYQARVRKTVVFLGI ERIVPHSERSQSRSYSRAFADTVPKGWEDKVREAVGFILSKKYDDLRYLEYSRYRLPIVKIGDLVYSGFNMGAGENALFE IFSTIYSCGEQALLVLDEIELGLHVKAQKLFMKKLKEVCNETGTQVICTTHSREIFECLPDDARYFVETIGGKTRLIGGI SPEFAFAKMGAPGGNELDIFVEDDVARSILQAILPASIRTRVTIKVIGSATAIARQLAAHYVRKDQKPTLAIFDGDQRAK DADNLGHAKKMAENAGAEFDAWYKEHVGYLPGETWPEAWLVQKAIEAKMSTAVALAVEPDAVTGVLEYALQAGKHNEFYE IAKNVGLDKQQCLERLSAAVCASFPGDFAALLKLVADQLR
Sequences:
>Translated_520_residues MTMKYRESQVDKELRQWFAKDMSKALLRRIMLIRGSLRGINSLDISFTYPITAFAGINGAGKSTILALACCAYHANKNGF KLPRRKNPYYTFSDFFIRHKEEAEPDGIEISYAIAYNNWKKTDSFPNGEGVAYQRRKKNKGGKWNDYQARVRKTVVFLGI ERIVPHSERSQSRSYSRAFADTVPKGWEDKVREAVGFILSKKYDDLRYLEYSRYRLPIVKIGDLVYSGFNMGAGENALFE IFSTIYSCGEQALLVLDEIELGLHVKAQKLFMKKLKEVCNETGTQVICTTHSREIFECLPDDARYFVETIGGKTRLIGGI SPEFAFAKMGAPGGNELDIFVEDDVARSILQAILPASIRTRVTIKVIGSATAIARQLAAHYVRKDQKPTLAIFDGDQRAK DADNLGHAKKMAENAGAEFDAWYKEHVGYLPGETWPEAWLVQKAIEAKMSTAVALAVEPDAVTGVLEYALQAGKHNEFYE IAKNVGLDKQQCLERLSAAVCASFPGDFAALLKLVADQLR >Mature_519_residues TMKYRESQVDKELRQWFAKDMSKALLRRIMLIRGSLRGINSLDISFTYPITAFAGINGAGKSTILALACCAYHANKNGFK LPRRKNPYYTFSDFFIRHKEEAEPDGIEISYAIAYNNWKKTDSFPNGEGVAYQRRKKNKGGKWNDYQARVRKTVVFLGIE RIVPHSERSQSRSYSRAFADTVPKGWEDKVREAVGFILSKKYDDLRYLEYSRYRLPIVKIGDLVYSGFNMGAGENALFEI FSTIYSCGEQALLVLDEIELGLHVKAQKLFMKKLKEVCNETGTQVICTTHSREIFECLPDDARYFVETIGGKTRLIGGIS PEFAFAKMGAPGGNELDIFVEDDVARSILQAILPASIRTRVTIKVIGSATAIARQLAAHYVRKDQKPTLAIFDGDQRAKD ADNLGHAKKMAENAGAEFDAWYKEHVGYLPGETWPEAWLVQKAIEAKMSTAVALAVEPDAVTGVLEYALQAGKHNEFYEI AKNVGLDKQQCLERLSAAVCASFPGDFAALLKLVADQLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58320; Mature: 58189
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMKYRESQVDKELRQWFAKDMSKALLRRIMLIRGSLRGINSLDISFTYPITAFAGINGA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHEECCCCC GKSTILALACCAYHANKNGFKLPRRKNPYYTFSDFFIRHKEEAEPDGIEISYAIAYNNWK CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEEECCCC KTDSFPNGEGVAYQRRKKNKGGKWNDYQARVRKTVVFLGIERIVPHSERSQSRSYSRAFA CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DTVPKGWEDKVREAVGFILSKKYDDLRYLEYSRYRLPIVKIGDLVYSGFNMGAGENALFE HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCHHHHH IFSTIYSCGEQALLVLDEIELGLHVKAQKLFMKKLKEVCNETGTQVICTTHSREIFECLP HHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCC DDARYFVETIGGKTRLIGGISPEFAFAKMGAPGGNELDIFVEDDVARSILQAILPASIRT CHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCHHCC RVTIKVIGSATAIARQLAAHYVRKDQKPTLAIFDGDQRAKDADNLGHAKKMAENAGAEFD EEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHH AWYKEHVGYLPGETWPEAWLVQKAIEAKMSTAVALAVEPDAVTGVLEYALQAGKHNEFYE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCHHHH IAKNVGLDKQQCLERLSAAVCASFPGDFAALLKLVADQLR HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC >Mature Secondary Structure TMKYRESQVDKELRQWFAKDMSKALLRRIMLIRGSLRGINSLDISFTYPITAFAGINGA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHEECCCCC GKSTILALACCAYHANKNGFKLPRRKNPYYTFSDFFIRHKEEAEPDGIEISYAIAYNNWK CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHCCCCCCCCCEEEEEEEEECCCC KTDSFPNGEGVAYQRRKKNKGGKWNDYQARVRKTVVFLGIERIVPHSERSQSRSYSRAFA CCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH DTVPKGWEDKVREAVGFILSKKYDDLRYLEYSRYRLPIVKIGDLVYSGFNMGAGENALFE HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEHHHHHHCCCCCCCCCHHHHH IFSTIYSCGEQALLVLDEIELGLHVKAQKLFMKKLKEVCNETGTQVICTTHSREIFECLP HHHHHHHCCCCEEEEEEHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHCC DDARYFVETIGGKTRLIGGISPEFAFAKMGAPGGNELDIFVEDDVARSILQAILPASIRT CHHHHHHHHHCCCEEEECCCCCCHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCCCHHCC RVTIKVIGSATAIARQLAAHYVRKDQKPTLAIFDGDQRAKDADNLGHAKKMAENAGAEFD EEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCHH AWYKEHVGYLPGETWPEAWLVQKAIEAKMSTAVALAVEPDAVTGVLEYALQAGKHNEFYE HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHCCCCCHHHH IAKNVGLDKQQCLERLSAAVCASFPGDFAALLKLVADQLR HHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA