Definition Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence.
Accession NC_006350
Length 4,074,542

Click here to switch to the map view.

The map label for this gene is 53720895

Identifier: 53720895

GI number: 53720895

Start: 3901018

End: 3902118

Strand: Reverse

Name: 53720895

Synonym: BPSL3285

Alternate gene names: NA

Gene position: 3902118-3901018 (Counterclockwise)

Preceding gene: 53720898

Following gene: 53720894

Centisome position: 95.77

GC content: 72.48

Gene sequence:

>1101_bases
ATGACTTCCCGTATCGCCCCGACTCCGTTCGCCGCCCGGTTCGACTTGCGCCTGCCGCTCGTGCAGGCGCCGATGGTCGG
CGCGACGACGCCCGCGCTCGTCGCGGCCGCCTCCAACGCCGGTGCGCTCGGCAGCCTCGGCGGCGCGTCGTTCGCGCCGG
AGAAGCTTGCCGCCGAAATCGCCGCGGTGCGTGCCGCGACGCGCCGCGCGTTCGCCGTGAACCTGTTCGTGCTGCCCGAC
GCGCAGCCGGACGACGCGGCCGTGCGTCGCGCGCTCGACGCGATCGATCCGCTGCGCGCGCGGTTCGGGTTGCCGCCCGG
CGCGCCGCTGCCGCGCTACGCGCCGGATTTCCGCGCGCAACTCGATGCGCTCGTCGACGCGCGCGTGCCGGTCGCGAGCT
TCACGTTCGGCGTGCTCGACAAGAAAGATGTCGTCCGGCTGCAGGCGGCGGGCACGTATGTGATCGGCACGGCAACGCAT
GTTGCCGAGGGCCTCGCGTGGCAGGTGGCGGGCGCCGACGCGATCTGCGCGCAAGGCGCGGAAGCGGGCGGCCATCGCGG
CACGTTCATCGGCTCGGCCGAAGACGCGCTCGTCGGCACGATCGCGCTCGTGCCGCAGCTCGTCGACGCGACGAATCTGC
CGGTGCTCGCGGCGGGCGGCATCATGGACGGGCGTGGGATCGCCGCCGCGCTCGCGCTCGGCGCGCAAGCCGCGCAGCTC
GGCACCGCGTTTCTCACGTGCGCGGAAAGCGCGATTCCCGCGTGCTGGAAAGCGCGTCTGCTCGCGAGCGACGATACGTC
GACGTCCGTCACGCGCGCGATCACGGGCCGCCACGCGCGCGGCATCCGCAATGCGCTGATGACGCAACTGGCCGGACGGC
CCGATTCGGTCGCGCCGTATCCGGTGCAAAACGCGCTGACGCAGGAGCTGCGGCAAACCGCCGCGCGAGCGGGCGACGCC
GAGTACTTGTCGTTGTGGTCCGGGCAAGGCGCGCCGCTCGGCAAGCACCGCGATGGCGCGCAAACCACCGCGCAATTGAT
CGACGCGCTCGACGCCGAATGGCGCGCTGCGCTTTCGCGCTCCGTTATTTCCCTGGTCTGA

Upstream 100 bases:

>100_bases
TAGAGTCGGCTCGTCGAGCATTCGATTCGTCCCGTCTCGTGCATGAACGCGTGCCTGCCTGCACGCGTTCGCCGCACCTC
ATCCATTCGAGGATCCCGCC

Downstream 100 bases:

>100_bases
TGAATTGGCCGGCGCGACGTGAAAGCGCGCCGGTCGCATTGCCGACACGTTCTGCTCACCGAATTATTTTCGCCGGAAAG
CGTTGATTAAAAACATGATT

Product: putative oxidoreductase

Products: NA

Alternate protein names: Nitroalkane oxidase [H]

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD
AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH
VAEGLAWQVAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL
GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDA
EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV

Sequences:

>Translated_366_residues
MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD
AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH
VAEGLAWQVAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL
GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDA
EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV
>Mature_365_residues
TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPDA
QPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHV
AEGLAWQVAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQLG
TAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPYPVQNALTQELRQTAARAGDAE
YLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV

Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]

COG id: COG2070

COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitronate monooxygenase family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6322609, Length=343, Percent_Identity=29.1545189504373, Blast_Score=103, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004136
- InterPro:   IPR013785 [H]

Pfam domain/function: PF03060 NPD [H]

EC number: =1.13.12.16 [H]

Molecular weight: Translated: 37546; Mature: 37415

Theoretical pI: Translated: 8.08; Mature: 8.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI
CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH
AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ
HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQVAGADAICAQGA
HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHCCCEEEECCCHHHHHCCC
EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPY
HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR
CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVISLV
HHHHCC
>Mature Secondary Structure 
TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI
CCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH
AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ
HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQVAGADAICAQGA
HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHCCCEEEECCCHHHHHCCC
EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH
GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMTQLAGRPDSVAPY
HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR
CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SVISLV
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA