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The map label for this gene is yadH [H]

Identifier: 53720750

GI number: 53720750

Start: 3743573

End: 3744328

Strand: Reverse

Name: yadH [H]

Synonym: BPSL3143

Alternate gene names: 53720750

Gene position: 3744328-3743573 (Counterclockwise)

Preceding gene: 53720751

Following gene: 53720749

Centisome position: 91.9

GC content: 63.76

Gene sequence:

>756_bases
ATGAGCGGGTTCCGCACGCTGTTCTACAAGGAAATTCTGCGGTTCTGGAAGGTGTCGTTCCAGACGGTGCTCGCGCCCGT
CGTCACCGCGCTGCTCTACCTGACGATCTTCGGCCATGCGCTCACGGGCCGCGTCAACGTGTATCCGGGCGTCGAGTACG
TGAGCTTTCTCGTGCCCGGCCTCGTGATGATGAGCGTGCTGCAGAATGCGTTCGCGAACAGCTCGTCGTCGCTGATCCAG
TCGAAGATCACGGGCAACCTCGTGTTCATGCTGCTGCCGCCGCTGTCGTCCGCGGACATCTTCGGCGCGTACGTGCTCGC
GTCCGTCGTGCGCGGGCTCGCGGTCGGCGCGGGCGTGTTCGTCGTCACGGTGTGGTTCATTCCGATGAGCTTCGCGGCGC
CCCTGTACATCGTCGCGTTCGCGCTGTTCGGCTCGGCGATTCTCGGCACGCTGGGCCTCATCGCCGGGATCTGGGCCGAG
AAGTTCGATCAGCTCGCCGCGTTCCAGAACTTCCTCATCATGCCGCTCACGTTCCTCTCGGGCGTGTTCTATTCGACGCA
TTCGCTGCCGCCCGTGTGGCGCGAGGTGTCGCGGCTCAACCCGTTCTTCTACATGATCGACGGTTTTCGCTACGGGTTCT
TCGGCATCGCCGACGTGAACCCGCTCGCGAGCCTTTCGGTCGTCGCCGGCTTCTTCGTGCTGCTCGCGCTGATCGCGATG
CGGCTCCTCGCCACCGGCTACAAACTGCGTCATTGA

Upstream 100 bases:

>100_bases
CGGCCGGCTGCGGCTTCGACGAGATCGAGATCCGCAAGGCCGATCTGGAGGATGTGTTCGTGCAGGTGATGAACGGCGCC
GATGTGATCGAGGGGTTGGC

Downstream 100 bases:

>100_bases
TATGAAGCGACGGCCGCCCGCCGCGTTCGCCGCCGCTTCGCGGCGCGCGCCCGGGCGGCCTGGCGCGTACTGACAGGAGC
ATTTCATGTTGCCGACTCCC

Product: putative ABC transporter inner membrane subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 250

Protein sequence:

>251_residues
MSGFRTLFYKEILRFWKVSFQTVLAPVVTALLYLTIFGHALTGRVNVYPGVEYVSFLVPGLVMMSVLQNAFANSSSSLIQ
SKITGNLVFMLLPPLSSADIFGAYVLASVVRGLAVGAGVFVVTVWFIPMSFAAPLYIVAFALFGSAILGTLGLIAGIWAE
KFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRYGFFGIADVNPLASLSVVAGFFVLLALIAM
RLLATGYKLRH

Sequences:

>Translated_251_residues
MSGFRTLFYKEILRFWKVSFQTVLAPVVTALLYLTIFGHALTGRVNVYPGVEYVSFLVPGLVMMSVLQNAFANSSSSLIQ
SKITGNLVFMLLPPLSSADIFGAYVLASVVRGLAVGAGVFVVTVWFIPMSFAAPLYIVAFALFGSAILGTLGLIAGIWAE
KFDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRYGFFGIADVNPLASLSVVAGFFVLLALIAM
RLLATGYKLRH
>Mature_250_residues
SGFRTLFYKEILRFWKVSFQTVLAPVVTALLYLTIFGHALTGRVNVYPGVEYVSFLVPGLVMMSVLQNAFANSSSSLIQS
KITGNLVFMLLPPLSSADIFGAYVLASVVRGLAVGAGVFVVTVWFIPMSFAAPLYIVAFALFGSAILGTLGLIAGIWAEK
FDQLAAFQNFLIMPLTFLSGVFYSTHSLPPVWREVSRLNPFFYMIDGFRYGFFGIADVNPLASLSVVAGFFVLLALIAMR
LLATGYKLRH

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=247, Percent_Identity=40.8906882591093, Blast_Score=176, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 27516; Mature: 27385

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHCHHCCC
>Mature Secondary Structure 
SGFRTLFYKEILRFWKVSFQTVLAPVVTALLYLTIFGHALTGRVNVYPGVEYVSFLVPG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCHHHHHHHHHH
LVMMSVLQNAFANSSSSLIQSKITGNLVFMLLPPLSSADIFGAYVLASVVRGLAVGAGVF
HHHHHHHHHHHCCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
VVTVWFIPMSFAAPLYIVAFALFGSAILGTLGLIAGIWAEKFDQLAAFQNFLIMPLTFLS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVFYSTHSLPPVWREVSRLNPFFYMIDGFRYGFFGIADVNPLASLSVVAGFFVLLALIAM
HHHHHCCCCCHHHHHHHHCCCHHEEECCHHHCCEECCCCCHHHHHHHHHHHHHHHHHHHH
RLLATGYKLRH
HHHHHCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]