Click here to switch to the map view.

The map label for this gene is 53720717

Identifier: 53720717

GI number: 53720717

Start: 3713279

End: 3713950

Strand: Reverse

Name: 53720717

Synonym: BPSL3108

Alternate gene names: NA

Gene position: 3713950-3713279 (Counterclockwise)

Preceding gene: 53720725

Following gene: 53720716

Centisome position: 91.15

GC content: 70.83

Gene sequence:

>672_bases
ATGAAAGACCGTCTCTTCGCAAAACTTTCTGGGGTAGTGCTCGCCTGCGGCATCATCGCCGGTTGCGCATCGCAGCCGAC
GCCGCCAACGACCGAAGCGTTCAACAAATCGCTGGCCGACGCCGACGCGGTGGCGAAGACGGGCGATCAGGAGCGTGCGA
TAGGCCTTTACCAGCAGCTCGCGAAGTCCGATCCGACGCGCGAGGAGCCGTGGTCGCGCATCGCGCAGATCCAGTTCCAG
CAGGGCCACTACGGCCAGGCGATCGTCGCCGCGCAGGAAGCGCTGCAGCGCGACAAGACCGACCGTCAGGCGAAGAGCGT
GCTCGCCGTCGCGGGCCTGCGCATCGCGACCGAATCGCTCGGCGAGCTGCGCCAGGATTCGTCGCTCGCCGGCGACGCGA
AGTCCGACGCGCAAGCGCTCGCGAAGCAGCTGCGCGACACGCTCGGCGAGGCCGCGCTGTTCCCGCCGGAGCAGCAGGCG
ACGAAGCCCGTCGTGAAGAAGCGCCGCATCGTTCGCCGCGCGAAGCCCGTGCACGAAGCCCCGCGCGCCGCGGAAAGCGA
AACGGCAGCCGCACCCGCGACACCGCCCGCCGCGCCCGCGCAGCCCGCCGCCACGCCGGCGCCGGCGCCCGCGAAGGCGG
CAGGCGGCGATCCGTTCAGCGCACTGCGTTAA

Upstream 100 bases:

>100_bases
GAATTATGAAAAATTGATCGGTACTATACCCGCGCGCTTGTAGCAAAGCAAAATCACGAATTCTCAACGATTTAAAACGC
CCGCGCCGGGGATATAAACG

Downstream 100 bases:

>100_bases
GCCGCGCGCGATCCACACACTCACCGGGAGCCGTCGATGGCGAAGAAAGAAAGCATTCAAAAGCGCTTGCAGAAAGTGCG
GCCGCCCCGCGTCCAGTTGA

Product: putative lipoprotein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Repeat; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKDRLFAKLSGVVLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQ
QGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQA
TKPVVKKRRIVRRAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR

Sequences:

>Translated_223_residues
MKDRLFAKLSGVVLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQ
QGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQA
TKPVVKKRRIVRRAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR
>Mature_223_residues
MKDRLFAKLSGVVLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQ
QGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQA
TKPVVKKRRIVRRAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23373; Mature: 23373

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDRLFAKLSGVVLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AKSDPTREEPWSRIAQIQFQQGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESL
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVRRAKPVHEA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHC
PRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MKDRLFAKLSGVVLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQL
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
AKSDPTREEPWSRIAQIQFQQGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESL
HHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVRRAKPVHEA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHC
PRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR
CCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA