| Definition | Burkholderia pseudomallei K96243 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_006350 |
| Length | 4,074,542 |
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The map label for this gene is 53720666
Identifier: 53720666
GI number: 53720666
Start: 3646478
End: 3648316
Strand: Reverse
Name: 53720666
Synonym: BPSL3057
Alternate gene names: NA
Gene position: 3648316-3646478 (Counterclockwise)
Preceding gene: 53720667
Following gene: 53720665
Centisome position: 89.54
GC content: 69.87
Gene sequence:
>1839_bases ATGAAGCCGATTCGCTACACGATCGTTCCGAAAGATCCCGCCGCGCACCTGTTCGAGGTGACGCTCACGCTCGCCGATCC GGACCCGGCGGGCCAGCGCTTCGCGCTGCCCGTATGGATTCCGGGCAGCTATATGGTGCGCGAGTTCGCGCGCAATATCG TGACGCTGCGTGCGTTCAACGAAGCGGGCCGCAAGCTGCGGATCGGCAAGCTCGACAAGCAGACCTGGCAGGCCGCGCCG GCGCCCGGGCCGATCACGCTGCGCTACGACGTCTACGCGTGGGACCTGTCGGTGCGCGCCGCGCACCTGGACGACACGGG CGGCTTCTTCAACGGCACGAGCGTGTTTCTCGCGCCGCTCGGCCGCGAGGATGCGCCGTGCGAGGTGATGATCGAGCGGC CGGCGGGCGACGCGTACCGGCGCTGGCGCGTCGCGACCGCGCTGCCGGAGGCGCGCGGCACGAAACGCTACGGCTTCGGC GCGTACCGCGCGGAGAATTACGACGAGCTGATCGATCATCCGGTCACGCTCGGCGAATTCGCGCTCGCGTCGTTCGACGC GCACGGCGTGCCGCACGATATCGCGATCGCGGGCCGCGTGACCGGGCTCGATCTCGAGCGGCTCGCGGCCGACCTGAAGC GGGTGTGCGAGGCGCAGATCGCGCTGTTCGAGCCGAAGACCAGGCGCGCGCCGATGTCGCGCTACGTGTTCATGACGCAG GCGGTCAGCGACGGCTACGGCGGGCTCGAGCATCGCGCGTCGACGGCGCTCGTCTGCAATCGCACCGATCTGCCGGTGAA GGGGCGCCCTGAGAAGACGGACGGCTATCGGACTTACCTCGGCCTGTGCAGCCACGAGTACTTCCATACATGGAACGTGA AGCGGATCAAGCCGGCCGCGTTCGCGCCGTACGATCTGTCGCAGGAGAATTACACGTCGCTGCTGTGGCTCTTCGAGGGC TTCACGTCGTACTACGACGACCTGATGCTCGCGCGCAGCGGCCTCATCTCGCAGGACGACTATTTCGCGCTCGTCGGCCG CACGATCGCCGGCGTGCAGCGCGGCGCCGGCCGGCTCAGGCAGAGCGTCGCCGAAAGCTCGTTCGATGCGTGGATCAAGT ATTACCGGCAGGACGAAAACGCGACGAACGCGATCGTCAGCTATTACACGAAGGGCTCGCTCGTCGCGCTCGCGTTCGAT CTGGCGATTCGCGCGCGCAGCCGCCACCGCAAATCGCTCGACGACGTGATGCGGCTTTTGTGGCAGCGCTTCGGGCGCGA CTTCTACCACGGCAAGCCGCAAGGCGTCGGCGAGGACGACGTGAAGGCGCTGATCGCCGAAGCGACGGGTGTCGATCTCG GCCGTCTTTTCGACGAAGCGGTGTCCGGCACGCGCGATCTGCCGCTCGCCGAACTCTTCGAGCCGTTCGGCGTGACGCTC GCGCCGGACGGGGGCGCGGGCGGCGCGGGCGGCGCGGCCGATGCGCCCGCGAAGCCGACGCTCGGCGCGCGCACGCGCGG CGGCGCGGAATGCACGCTCGCGGCCGTCTACGAAGGCGGCGCCGCGCATCGGGCCGGGCTGTCCGCGGGCGACGCGCTCG TCGCGATCGACGGGCTGCGCGTGACGGGCTCGAACCTCGACGCGCTGCTCGCGCGCTACCGCGTCGGCGACAAGGTCGAG ATCCACGCATTCCGGCGCGACGAACTGCGCGTGGTGCAGCTCAAGCTCGACGGCCCGGACATCGCGCGCTACAAGCTGGC CGCTCAGCCGAAGCCCGCGGCCGCGCGCGCCCGTCGCGACGCGTGGCTCGGGCTGCCGGCGGCGCGCGGCGGTCGATAA
Upstream 100 bases:
>100_bases ACGCGGCGTTTCCTGCATCGCGAAGGAGGCGTCGGCGCGTAGCCGACGCCTCTTTTCGTATCCGCATCCCTACCCCGTTC CCGCCCGACCGATTCCGACG
Downstream 100 bases:
>100_bases TCGCGCCGAACCGGGCGCGGATTGTTTCGCTATTGCAACAATCCGTCACCCGGCCACCGCTTTTTCGCGGCGGCGGCGAT CCGCACAATGGCGTCACTCG
Product: peptidase
Products: NA
Alternate protein names: Peptidase M; Protease; M61 Family Peptidase; M61 Glycyl Aminopeptidase; M61 Family Glycyl Aminopeptidase; Pdz/Dhr/Glgf; Glycyl Aminopeptidase; Trypsin-Like Serine Protease; Aminopeptidase N Family Protein; Metallopeptidase; PDZ Domain-Containing Protein; Protease With C-Terminal PDZ Domain-Containing Protein; PDZ/DHR/GLGFPeptidase M; PDZ Domain Protein; Protease With C-Terminal PDZ Domain; Signaling Protein; M61 Glycyl Aminopeptidase Protein; M61 Glycyl Aminopeptidase Family Protein
Number of amino acids: Translated: 612; Mature: 612
Protein sequence:
>612_residues MKPIRYTIVPKDPAAHLFEVTLTLADPDPAGQRFALPVWIPGSYMVREFARNIVTLRAFNEAGRKLRIGKLDKQTWQAAP APGPITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPLGREDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFG AYRAENYDELIDHPVTLGEFALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTRRAPMSRYVFMTQ AVSDGYGGLEHRASTALVCNRTDLPVKGRPEKTDGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSQENYTSLLWLFEG FTSYYDDLMLARSGLISQDDYFALVGRTIAGVQRGAGRLRQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFD LAIRARSRHRKSLDDVMRLLWQRFGRDFYHGKPQGVGEDDVKALIAEATGVDLGRLFDEAVSGTRDLPLAELFEPFGVTL APDGGAGGAGGAADAPAKPTLGARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVE IHAFRRDELRVVQLKLDGPDIARYKLAAQPKPAAARARRDAWLGLPAARGGR
Sequences:
>Translated_612_residues MKPIRYTIVPKDPAAHLFEVTLTLADPDPAGQRFALPVWIPGSYMVREFARNIVTLRAFNEAGRKLRIGKLDKQTWQAAP APGPITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPLGREDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFG AYRAENYDELIDHPVTLGEFALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTRRAPMSRYVFMTQ AVSDGYGGLEHRASTALVCNRTDLPVKGRPEKTDGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSQENYTSLLWLFEG FTSYYDDLMLARSGLISQDDYFALVGRTIAGVQRGAGRLRQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFD LAIRARSRHRKSLDDVMRLLWQRFGRDFYHGKPQGVGEDDVKALIAEATGVDLGRLFDEAVSGTRDLPLAELFEPFGVTL APDGGAGGAGGAADAPAKPTLGARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVE IHAFRRDELRVVQLKLDGPDIARYKLAAQPKPAAARARRDAWLGLPAARGGR >Mature_612_residues MKPIRYTIVPKDPAAHLFEVTLTLADPDPAGQRFALPVWIPGSYMVREFARNIVTLRAFNEAGRKLRIGKLDKQTWQAAP APGPITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPLGREDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFG AYRAENYDELIDHPVTLGEFALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTRRAPMSRYVFMTQ AVSDGYGGLEHRASTALVCNRTDLPVKGRPEKTDGYRTYLGLCSHEYFHTWNVKRIKPAAFAPYDLSQENYTSLLWLFEG FTSYYDDLMLARSGLISQDDYFALVGRTIAGVQRGAGRLRQSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFD LAIRARSRHRKSLDDVMRLLWQRFGRDFYHGKPQGVGEDDVKALIAEATGVDLGRLFDEAVSGTRDLPLAELFEPFGVTL APDGGAGGAGGAADAPAKPTLGARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLRVTGSNLDALLARYRVGDKVE IHAFRRDELRVVQLKLDGPDIARYKLAAQPKPAAARARRDAWLGLPAARGGR
Specific function: Unknown
COG id: COG3975
COG function: function code R; Predicted protease with the C-terminal PDZ domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67160; Mature: 67160
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: PS50106 PDZ
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPIRYTIVPKDPAAHLFEVTLTLADPDPAGQRFALPVWIPGSYMVREFARNIVTLRAFN CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEEHH EAGRKLRIGKLDKQTWQAAPAPGPITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPL HCCCEEEECCCCHHHHCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEC GREDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFGAYRAENYDELIDHPVTLGEF CCCCCCCEEEEECCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHH ALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTRRAPMSRYVFMTQ HHHHCCCCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEH AVSDGYGGLEHRASTALVCNRTDLPVKGRPEKTDGYRTYLGLCSHEYFHTWNVKRIKPAA HHCCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEECCCC FAPYDLSQENYTSLLWLFEGFTSYYDDLMLARSGLISQDDYFALVGRTIAGVQRGAGRLR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRARSRHRKSLDDVMRLL HHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEHHHHHHHHHHHHHCCHHHHHHHH WQRFGRDFYHGKPQGVGEDDVKALIAEATGVDLGRLFDEAVSGTRDLPLAELFEPFGVTL HHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEE APDGGAGGAGGAADAPAKPTLGARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEE VTGSNLDALLARYRVGDKVEIHAFRRDELRVVQLKLDGPDIARYKLAAQPKPAAARARRD EECCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHH AWLGLPAARGGR HHCCCCCCCCCC >Mature Secondary Structure MKPIRYTIVPKDPAAHLFEVTLTLADPDPAGQRFALPVWIPGSYMVREFARNIVTLRAFN CCCEEEEEECCCCCCEEEEEEEEEECCCCCCCEEEEEEEECCHHHHHHHHHHHEEEEEHH EAGRKLRIGKLDKQTWQAAPAPGPITLRYDVYAWDLSVRAAHLDDTGGFFNGTSVFLAPL HCCCEEEECCCCHHHHCCCCCCCCEEEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEC GREDAPCEVMIERPAGDAYRRWRVATALPEARGTKRYGFGAYRAENYDELIDHPVTLGEF CCCCCCCEEEEECCCCHHHHHEEHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHH ALASFDAHGVPHDIAIAGRVTGLDLERLAADLKRVCEAQIALFEPKTRRAPMSRYVFMTQ HHHHCCCCCCCCCEEEECEECCCCHHHHHHHHHHHHHHHHEEECCCCCCCCCHHEEEEEH AVSDGYGGLEHRASTALVCNRTDLPVKGRPEKTDGYRTYLGLCSHEYFHTWNVKRIKPAA HHCCCCCCCHHCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCEECCCC FAPYDLSQENYTSLLWLFEGFTSYYDDLMLARSGLISQDDYFALVGRTIAGVQRGAGRLR CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QSVAESSFDAWIKYYRQDENATNAIVSYYTKGSLVALAFDLAIRARSRHRKSLDDVMRLL HHHHHHHHHHHHHHHHCCCCHHHHHHEEECCCCEEEEHHHHHHHHHHHHHCCHHHHHHHH WQRFGRDFYHGKPQGVGEDDVKALIAEATGVDLGRLFDEAVSGTRDLPLAELFEPFGVTL HHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHCCCCCEE APDGGAGGAGGAADAPAKPTLGARTRGGAECTLAAVYEGGAAHRAGLSAGDALVAIDGLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHCCCCCCCEEEEEECEE VTGSNLDALLARYRVGDKVEIHAFRRDELRVVQLKLDGPDIARYKLAAQPKPAAARARRD EECCCHHHHHHHHCCCCEEEEEEEECCCEEEEEEEECCCCCEEEEECCCCCCHHHHHHHH AWLGLPAARGGR HHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA