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The map label for this gene is yphB [H]

Identifier: 53720572

GI number: 53720572

Start: 3536431

End: 3537414

Strand: Reverse

Name: yphB [H]

Synonym: BPSL2964

Alternate gene names: 53720572

Gene position: 3537414-3536431 (Counterclockwise)

Preceding gene: 53720573

Following gene: 53720571

Centisome position: 86.82

GC content: 73.37

Gene sequence:

>984_bases
GTGAGCCCGGGGCCGCAGACGTCGCAGATCGCGCGCGGCGCGGGCGTCACCGAGACGGCGATCGCGACGCTCTCGAACGA
CATGCTGCGGCTCGACGTCGCGCCGCACCTGGGCGGCGGCGTCACGCGCTTCGACTGGCGCGGCGACGGCGCGCTCACGC
CGATCTTCCGCCGTTGCGATGCGCCCGGCGCGCGCACCGATCCGAACGAGCTCGCGTGCTATTCGCTGCTGCCGTATTCG
AACCGGATCGGCGGCGGGCGCTTCGAGTGCGACGGGCGGCTCGTGCGCGTGCCGCGCAACCGCTCGGCCGAGCCGCTGCC
GATTCACGGCGACGGCTGGCTCGCGCACTGGCAACTCGACGATGCGACCGATACGCAGCTCGGCCTGTCGCTCGATCGCA
GCAACGGCGCGCCGTATGCGTATCGCGCGACGCAGGTCTACGCGCTCGACGGCGCGACGCTCACGATCGCGCTCGGCATC
GAGAACACGGGCGCGACGCGCCTGCCGTTCGGGCTCGGCGTGCATCCGTTCATCGTGCGCGACGCGTCGACCGAACTCGC
GGCCGCCGCGAGCGGGCTGTGGCTGTCGACGCCCGACTGGCTGCCGTCGCGCCATGTCGGCGCGCCGCCCGCGTGGCGCT
TCGGCATCGCGTATCCGTTGCCGGACACGCTCGTCAATCACGCGTTCACCGGCTGGGGCGGCGGCGCGACGATCGCGTGG
CCGCAGCGCCGGCTCGGGCTGACGGTCACGGCCGACGCCGATTGCTATGTGTTGTATACGCCGCCCGGCGAGCCGTTCTT
CTGCTTCGAGCCGGTCGATCACCCGATCGACGCGGTGAACCTGCCGGGCGGCGGCGCCGCGCACGGCATGACGCTGCTCG
CGCCGGGCGAGCGCCTGATGCGGCGCTTTCGCTTCACCGTCGCGCGCACCGATGCGCGCGCGGCACCCGTCGCCCGCCAA
TCGAGGCGGCGCGCGATCGCGTAG

Upstream 100 bases:

>100_bases
GGACCGAATCATGACGGCGACGCATTCTCGTTCCACAGCCACCGATGCGGTGCAAACCTTGCAGACGCGCACCGCACGGC
GCGCAGCCGCCGCGCATCGG

Downstream 100 bases:

>100_bases
CGGCGCGGCCGGCGCCGGCCGTGCGCAGTCGCGAGCGCCCGTCGCGACGCGGGTAAAATACGCGCCTTCCCAACCGCCAA
GCCGCGAGTGAGCGCCATGT

Product: putative epimerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 326

Protein sequence:

>327_residues
MSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGALTPIFRRCDAPGARTDPNELACYSLLPYS
NRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSLDRSNGAPYAYRATQVYALDGATLTIALGI
ENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPPAWRFGIAYPLPDTLVNHAFTGWGGGATIAW
PQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMTLLAPGERLMRRFRFTVARTDARAAPVARQ
SRRRAIA

Sequences:

>Translated_327_residues
MSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGALTPIFRRCDAPGARTDPNELACYSLLPYS
NRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSLDRSNGAPYAYRATQVYALDGATLTIALGI
ENTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPPAWRFGIAYPLPDTLVNHAFTGWGGGATIAW
PQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMTLLAPGERLMRRFRFTVARTDARAAPVARQ
SRRRAIA
>Mature_326_residues
SPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGALTPIFRRCDAPGARTDPNELACYSLLPYSN
RIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLDDATDTQLGLSLDRSNGAPYAYRATQVYALDGATLTIALGIE
NTGATRLPFGLGVHPFIVRDASTELAAAASGLWLSTPDWLPSRHVGAPPAWRFGIAYPLPDTLVNHAFTGWGGGATIAWP
QRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMTLLAPGERLMRRFRFTVARTDARAAPVARQS
RRRAIA

Specific function: Unknown

COG id: COG2017

COG function: function code G; Galactose mutarotase and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788894, Length=299, Percent_Identity=35.4515050167224, Blast_Score=158, Evalue=4e-40,
Organism=Escherichia coli, GI1790311, Length=223, Percent_Identity=25.1121076233184, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008183
- InterPro:   IPR011013
- InterPro:   IPR014718 [H]

Pfam domain/function: PF01263 Aldose_epim [H]

EC number: NA

Molecular weight: Translated: 35115; Mature: 34984

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGALTPIFRRCD
CCCCCCHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHCC
APGARTDPNELACYSLLPYSNRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLD
CCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCCEECCCCEEEEEEEC
DATDTQLGLSLDRSNGAPYAYRATQVYALDGATLTIALGIENTGATRLPFGLGVHPFIVR
CCCCCEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCEECCCCCCCCEEEEE
DASTELAAAASGLWLSTPDWLPSRHVGAPPAWRFGIAYPLPDTLVNHAFTGWGGGATIAW
CCCCHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEC
PQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMTLLAPGERLM
CHHHCCEEEECCCCEEEEECCCCCCEEEECCCCCCCCEEECCCCCHHCCEEEECCHHHHH
RRFRFTVARTDARAAPVARQSRRRAIA
HHHHHHEEECCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
SPGPQTSQIARGAGVTETAIATLSNDMLRLDVAPHLGGGVTRFDWRGDGALTPIFRRCD
CCCCCHHHHHCCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCCHHHHHCC
APGARTDPNELACYSLLPYSNRIGGGRFECDGRLVRVPRNRSAEPLPIHGDGWLAHWQLD
CCCCCCCCCCEEEEEECCCCCCCCCCEEEECCEEEECCCCCCCCCCEECCCCEEEEEEEC
DATDTQLGLSLDRSNGAPYAYRATQVYALDGATLTIALGIENTGATRLPFGLGVHPFIVR
CCCCCEEEEEEECCCCCCEEEEEEEEEEECCCEEEEEEEECCCCCEECCCCCCCCEEEEE
DASTELAAAASGLWLSTPDWLPSRHVGAPPAWRFGIAYPLPDTLVNHAFTGWGGGATIAW
CCCCHHHHHHCCCEECCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHCCCCCCCCEEEEC
PQRRLGLTVTADADCYVLYTPPGEPFFCFEPVDHPIDAVNLPGGGAAHGMTLLAPGERLM
CHHHCCEEEECCCCEEEEECCCCCCEEEECCCCCCCCEEECCCCCHHCCEEEECCHHHHH
RRFRFTVARTDARAAPVARQSRRRAIA
HHHHHHEEECCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]